BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024897
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus commun...   231   2e-58
ref|XP_003612324.1| Poly(A) polymerase [Medicago truncatula] gi|...   214   4e-53
ref|XP_002884069.1| polynucleotide adenylyltransferase family pr...   213   5e-53
ref|NP_179349.2| polynucleotide adenylyltransferase-like protein...   213   8e-53
dbj|BAC41875.1| putative poly(A) polymerase [Arabidopsis thaliana]    213   8e-53

>ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus communis]
            gi|223539096|gb|EEF40692.1| poly(A) polymerase, putative
            [Ricinus communis]
          Length = 675

 Score =  231 bits (590), Expect = 2e-58
 Identities = 126/277 (45%), Positives = 172/277 (62%), Gaps = 19/277 (6%)
 Frame = +1

Query: 4    LYMSILDLNKDRLMLEMDYMFSYGXXXXXXXXXKRFKILPVVLPFHAAYLYKQGRDQTVR 183
            L  S+  L+K R+M+E++YM SYG         +RF +L + LPFHAAYL +Q  +    
Sbjct: 259  LSSSVKSLDKARIMMELNYMLSYGAAESTIYLLQRFNLLELFLPFHAAYLSQQAGETFSL 318

Query: 184  CSPMLFKLFSSMDKLLACDRPGAPSLWIGVLAFHWALVKNPQDALVIWALSSVLYHGKWK 363
             S ML KLF ++D L++CDRP   SLW+G+LAFH ALV NPQDALV W  +SVLYHGKWK
Sbjct: 319  GSVMLMKLFFNLDTLVSCDRPCTSSLWVGLLAFHQALVTNPQDALVSWVFASVLYHGKWK 378

Query: 364  KAVKFVREKSNMHVGFSPEIAKSCRTKSDKALAEDVEHFVTKVISAIDNL---------- 513
              V+F RE + M V F+PEI+     KSD+ LAE+V H  + V  ++D L          
Sbjct: 379  DGVEFARENAKMQVKFAPEISGFSEFKSDEELAEEVSHLASLVQDSVDALMDTDTLAQSM 438

Query: 514  --------TGLAYISKYRGRAVGKLFKVVVNDIESYDEKRESFEIDYALLKKGNCNETRF 669
                    +GL ++SK     V +LF V+V+D+ESY  +RESF IDY LL KGN +ETRF
Sbjct: 439  SRFGVTSSSGLVFVSKKIANDVAQLFNVLVDDVESYKTERESFMIDYYLLGKGNQHETRF 498

Query: 670  VLGKIIMDTMSNEQLE-VRQVDENDKFIKKNQVVKLN 777
            VLGK+I++T+S    + V   ++  K I++    KL+
Sbjct: 499  VLGKVILETLSGGLTKGVEVAEDGPKVIEEKHDSKLS 535


>ref|XP_003612324.1| Poly(A) polymerase [Medicago truncatula] gi|355513659|gb|AES95282.1|
            Poly(A) polymerase [Medicago truncatula]
          Length = 675

 Score =  214 bits (544), Expect = 4e-53
 Identities = 123/311 (39%), Positives = 175/311 (56%), Gaps = 21/311 (6%)
 Frame = +1

Query: 22   DLNKDRLMLEMDYMFSYGXXXXXXXXXKRFKILPVVLPFHAAYLYKQGRDQTVRCSPMLF 201
            DLNKDR+M+EM+YM SYG          +FK+L  +LP  AAYL +Q   +  + S ML 
Sbjct: 234  DLNKDRMMIEMNYMLSYGAAEPSLRLLWKFKLLQFLLPVQAAYLDEQATKEDAQDSNMLM 293

Query: 202  KLFSSMDKLLACDRPGAPSLWIGVLAFHWALVKNPQDALVIWALSSVLYHGKWKKAVKFV 381
            KLF  MD L+ C RP   +LWIG+LAFH ALV NPQDALV+WA +SVLYHG W+  +KF 
Sbjct: 294  KLFFHMDNLVGCGRPSDCTLWIGLLAFHLALVNNPQDALVVWAFASVLYHGDWEGGIKFA 353

Query: 382  REKSNMHVGFSPEIAKSCRTKSDKALAEDVEHFVTKVISAIDNLTGL------------- 522
            +E + M V F PEI +S   KSD+ +AE V    + VI +I  L  +             
Sbjct: 354  KEHAKMSVNFEPEIKRSSICKSDEDIAEAVTKLASLVIDSIHPLVNIESLSQSLSRYPSV 413

Query: 523  ------AYISKYRGRAVGKLFKVVVNDIESYDEKRESFEIDYALLKKGNCNETRFVLGKI 684
                    +SK  G+AV ++F+V+VNDI+ Y  +R+S +I+Y +L  G+ +ETRFVLGKI
Sbjct: 414  PPPHMVLVVSKKTGKAVSEIFEVLVNDIKFYKSERKSAKINYDMLGSGHTSETRFVLGKI 473

Query: 685  IMDTMSNEQLEVRQVDENDKFIKKNQVVKLNGEAV--EDEKSCLLSSLFVGRSHKANKSS 858
            ++ TM +  +        +K     +  K  G+ V  ED++  L +     R  K  K  
Sbjct: 474  VLQTMQSGIIGDADGFGTEKCHPDTEGTKDFGQLVTREDKRKVLSTPNLEHRPQKLKKQK 533

Query: 859  SQAAEAVKKKK 891
                  ++++K
Sbjct: 534  LAENACIEEQK 544


>ref|XP_002884069.1| polynucleotide adenylyltransferase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329909|gb|EFH60328.1| polynucleotide
            adenylyltransferase family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 761

 Score =  213 bits (543), Expect = 5e-53
 Identities = 130/326 (39%), Positives = 193/326 (59%), Gaps = 21/326 (6%)
 Frame = +1

Query: 13   SILDLNKDRLMLEMDYMFSYGXXXXXXXXXKRFKILPVVLPFHAAYLYKQGRDQTVRCSP 192
            S+ +L++ RL++EM+YM +YG          +FK+L V+LPF AAYL  Q  + ++  S 
Sbjct: 285  SVANLDQFRLIMEMNYMLAYGAAAPSILLLMKFKLLHVLLPFQAAYL-DQASETSLSSSL 343

Query: 193  MLFKLFSSMDKLLACDRPGAPSLWIGVLAFHWALVKNPQDALVIWALSSVLYHGKWKKAV 372
            ML +LFS+MDKL++CD+P  P LWI VLAFH ALV+NPQ+A+V+ A +++LYH  W KAV
Sbjct: 344  MLVRLFSNMDKLVSCDQPADPKLWIAVLAFHIALVRNPQEAIVVRAFAALLYHRNWSKAV 403

Query: 373  KFVREKSNMHVGFSPEIAKSCRTKSDKALAEDVEHF------VTKVISAIDNL------- 513
            KF RE     VG++PE++K  R +SD+ LAE V  F         V++ I+ L       
Sbjct: 404  KFAREHETSVVGYAPEVSKFSRKRSDEDLAEAVSEFTCLLKDTQYVLTDIEALREALYLY 463

Query: 514  -----TGLAYISKYRGRAVGKLFKVVVNDIESYDEKRESFEIDYALLKKGNCNETRFVLG 678
                 +GL +I K +GR V +     ++D+ESY+ K+E F IDY LL KGN  E RFVLG
Sbjct: 464  PDFKFSGLVFIPKRKGRDVAEGL-ARLSDVESYESKKEGFSIDYLLLGKGNPCEVRFVLG 522

Query: 679  KIIMDTMSNEQLEVRQVDE-NDKFIKKNQVVKLNGEAVEDEKSCLLSSLFVGRSHKA--N 849
            KII+DT++ E + +  ++    K    NQ+V       +DE     SS     +H    +
Sbjct: 523  KIILDTIT-EGIVIEPLNSVKKKQSTSNQIVSAACLEKKDELFVTKSSKEENNNHTPVYD 581

Query: 850  KSSSQAAEAVKKKKKDGPQQADGEQE 927
             ++S   + +K+ +K+  Q+ D E E
Sbjct: 582  SNASSVLKILKRTRKESEQKIDQETE 607


>ref|NP_179349.2| polynucleotide adenylyltransferase-like protein [Arabidopsis
            thaliana] gi|330251561|gb|AEC06655.1| polynucleotide
            adenylyltransferase-like protein [Arabidopsis thaliana]
          Length = 757

 Score =  213 bits (541), Expect = 8e-53
 Identities = 129/332 (38%), Positives = 189/332 (56%), Gaps = 27/332 (8%)
 Frame = +1

Query: 13   SILDLNKDRLMLEMDYMFSYGXXXXXXXXXKRFKILPVVLPFHAAYLYKQGRDQTVRCSP 192
            S+ +L++ RL++EM+YM +YG          +FK+L V+LPF AAYL  Q    ++  S 
Sbjct: 281  SVANLDQFRLIMEMNYMLAYGAAAPSILLLMKFKLLHVLLPFQAAYL-DQASKTSLSSSL 339

Query: 193  MLFKLFSSMDKLLACDRPGAPSLWIGVLAFHWALVKNPQDALVIWALSSVLYHGKWKKAV 372
            ML +LFS+MDKL++CD+P  P LWI VLAFH ALV+NPQ+A+V+ A +++LYHG W KAV
Sbjct: 340  MLVRLFSNMDKLVSCDQPADPKLWIAVLAFHIALVRNPQEAIVVRAFAALLYHGNWSKAV 399

Query: 373  KFVREKSNMHVGFSPEIAKSCRTKSDKALAEDVEHFVTKVISAIDNLT------------ 516
            +F RE     +G++PE++KS R +SD+ LAE V  F   +      LT            
Sbjct: 400  EFAREHETSVIGYAPEVSKSSRKRSDEDLAEAVSEFTCLLKDTQYVLTDKEALREALYLY 459

Query: 517  ------GLAYISKYRGRAVGKLFKVVVNDIESYDEKRESFEIDYALLKKGNCNETRFVLG 678
                  GL +I K +GR V + F + ++D+ESY+ ++E F IDY LL KGN  E RFVLG
Sbjct: 460  PDFKFSGLVFIPKKKGRDVAEGF-MRLSDVESYESQKEGFSIDYVLLGKGNPCEVRFVLG 518

Query: 679  KIIMDTMSNEQLEVRQVDENDKFIKKNQVVKLNGEAVEDEKSCLLSSLFVGRSHKA---- 846
            KII+DT++   +         K   +N +V       +DE       LFV +S K     
Sbjct: 519  KIILDTITEGTVIEPLNSVKKKQSTRNHIVPAACLEKKDE-------LFVSKSSKEDNNN 571

Query: 847  -----NKSSSQAAEAVKKKKKDGPQQADGEQE 927
                 + ++S   + +K+ ++D  Q  D E E
Sbjct: 572  QTPVHDSNASSVLKILKRTREDSEQNNDQETE 603


>dbj|BAC41875.1| putative poly(A) polymerase [Arabidopsis thaliana]
          Length = 571

 Score =  213 bits (541), Expect = 8e-53
 Identities = 129/332 (38%), Positives = 189/332 (56%), Gaps = 27/332 (8%)
 Frame = +1

Query: 13   SILDLNKDRLMLEMDYMFSYGXXXXXXXXXKRFKILPVVLPFHAAYLYKQGRDQTVRCSP 192
            S+ +L++ RL++EM+YM +YG          +FK+L V+LPF AAYL  Q    ++  S 
Sbjct: 95   SVANLDQFRLIMEMNYMLAYGAAAPSILLLMKFKLLHVLLPFQAAYL-DQASKTSLSSSL 153

Query: 193  MLFKLFSSMDKLLACDRPGAPSLWIGVLAFHWALVKNPQDALVIWALSSVLYHGKWKKAV 372
            ML +LFS+MDKL++CD+P  P LWI VLAFH ALV+NPQ+A+V+ A +++LYHG W KAV
Sbjct: 154  MLVRLFSNMDKLVSCDQPADPKLWIAVLAFHIALVRNPQEAIVVRAFAALLYHGNWSKAV 213

Query: 373  KFVREKSNMHVGFSPEIAKSCRTKSDKALAEDVEHFVTKVISAIDNLT------------ 516
            +F RE     +G++PE++KS R +SD+ LAE V  F   +      LT            
Sbjct: 214  EFAREHGTSVIGYAPEVSKSSRKRSDEDLAEAVSEFTCLLKDTQYVLTDKEALREALYLY 273

Query: 517  ------GLAYISKYRGRAVGKLFKVVVNDIESYDEKRESFEIDYALLKKGNCNETRFVLG 678
                  GL +I K +GR V + F + ++D+ESY+ ++E F IDY LL KGN  E RFVLG
Sbjct: 274  PDFKFSGLVFIPKKKGRDVAEGF-MRLSDVESYESQKEGFSIDYVLLGKGNPCEVRFVLG 332

Query: 679  KIIMDTMSNEQLEVRQVDENDKFIKKNQVVKLNGEAVEDEKSCLLSSLFVGRSHKA---- 846
            KII+DT++   +         K   +N +V       +DE       LFV +S K     
Sbjct: 333  KIILDTITEGTVIEPLNSVKKKQSTRNHIVPAACLEKKDE-------LFVSKSSKEDNNN 385

Query: 847  -----NKSSSQAAEAVKKKKKDGPQQADGEQE 927
                 + ++S   + +K+ ++D  Q  D E E
Sbjct: 386  QTPVHDSNASSVLKILKRTREDSEQNNDQETE 417