BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024895
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135391.1| PREDICTED: uncharacterized protein LOC101209...   131   2e-28
ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumi...    68   3e-09
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    65   3e-08
ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm...    65   3e-08
ref|XP_003602302.1| F-box family protein [Medicago truncatula] g...    65   3e-08

>ref|XP_004135391.1| PREDICTED: uncharacterized protein LOC101209996 [Cucumis sativus]
          Length = 416

 Score =  131 bits (330), Expect = 2e-28
 Identities = 93/269 (34%), Positives = 132/269 (49%), Gaps = 12/269 (4%)
 Frame = -1

Query: 996 NPFSRTKLPLPEVSNLYCKMLLSTTSPTHPNSLFLLLGASGDHIACWTPGVQSSWRQHDL 817
           NPFS  K+ LP + N Y KM+LS  SP   N++   + +    IA W  G +  W ++ L
Sbjct: 135 NPFSVRKINLPRLWNFYHKMVLSG-SPAEENTICAAIHSQNREIAFWVQGSEV-WHKYKL 192

Query: 816 GVPSFKDAVFCGGRFYFVTRDYNIRTIDADXXXXXIKDCGGDPGECL----QLQFHHHQV 649
               F+DAVFC G  + +  D NI  I+A       ++      EC+    +++   H+V
Sbjct: 193 EGTPFEDAVFCNGSLFLLCNDSNIFQIEATSIISYFRE-----DECVISISEIKVQFHEV 247

Query: 648 EMPDRPTQTRLRLYLVESCGEVLLVCRYFDPAEGGFRVTRTFDVFKLDPQRMIWSKMESL 469
                 +Q  L+ YLVES G+VLLVCRYF         T  F+++ LD  +M W K+  L
Sbjct: 248 RSLKINSQHVLK-YLVESSGDVLLVCRYFSEKPDAVLETINFEIYSLDLSQMSWEKIVCL 306

Query: 468 GDRVLLIGNSGSTSFSAEDLGGDVSNCILFSHDRAALGSNEWTLESRRAPSSP---TPCS 298
            DR+L +G   S S S+ DLG  +SN I FS+D  A   NEW     +  SS       S
Sbjct: 307 DDRILFLGKCCSRSLSSTDLGILISNRIYFSNDDMAPWWNEWDSNHLKVVSSRFGLNNSS 366

Query: 297 FDGWGLFSLDRN-----CFIPSSCNRGDL 226
              WG F + R+     CF  +  N G +
Sbjct: 367 GKDWGTFHIIRDSSGKFCFHGNRDNWGPI 395


>ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
           gi|449485151|ref|XP_004157083.1| PREDICTED: F-box
           protein SKIP23-like [Cucumis sativus]
          Length = 392

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
 Frame = -1

Query: 969 LPEVSNLYCKMLLSTTSPTHPNSLFL--LLGASGDHIACWTPGVQSSWRQHDLGVPSFKD 796
           L ++ + + K ++ ++SP++PN      +L  SGD   C + G   SW   D      +D
Sbjct: 152 LRQMRDSFVKKIVLSSSPSNPNDFLAVAILNHSGDLAFCRSGG--GSWTFVDDAPSDCED 209

Query: 795 AVFCGGRFYFVTRDYNIRTIDADXXXXXIKDCGGDPGECLQLQFHHHQVEMPDRPTQTRL 616
            ++  G FY V + Y + ++                   + L+    QV +     Q   
Sbjct: 210 VIYSDGVFYAVDK-YGVVSL-------------------MDLRGSRSQVSLVATERQLAG 249

Query: 615 RL-YLVESCGEVLLVCRYFDPAEGG---------FRVTRTFDVFKLDPQRMIWSKMESLG 466
            + YLV+   E+LLV RY D    G         +R  R F+VF+++ +   W K+E+L 
Sbjct: 250 DIQYLVKLGQELLLVSRYLDIVNDGMEDELIPVMYRTVR-FEVFRMEWEGPRWEKVENLN 308

Query: 465 DRVLLIGNSGSTSFSAEDLGGDVSNCILFSHD 370
           +  L +G + S +FSA D G    NCI ++ D
Sbjct: 309 EMALFVGGNSSMAFSAADFGEISGNCIYYTDD 340


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 10/215 (4%)
 Frame = -1

Query: 984 RTKLPLPEVSNLYCKMLLSTTSPTHPNSLFLLLGASGDHIACWTPGVQSSWRQHDLGVPS 805
           R  + L ++ + + + ++ ++SP   N+  ++   +      +      SW   +     
Sbjct: 152 RVTVSLRQMRDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSF 211

Query: 804 FKDAVFCGGRFYFVTRDYNIRTIDADXXXXXIKDCGGDPGECLQLQFHHHQVEMPDRPTQ 625
            +D +F  G FY V +   I   D                    +     +V   + P Q
Sbjct: 212 CEDVIFVNGMFYAVNKAGQIVICD--------------------ISSDSPRVSFMETPRQ 251

Query: 624 TRLRL-YLVESCGEVLLVCRYFD-------PAEGGFRVTRT--FDVFKLDPQRMIWSKME 475
               + YLV S  E+LLV RY D       P      + RT  F+VF+LD     W +M 
Sbjct: 252 AGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMS 311

Query: 474 SLGDRVLLIGNSGSTSFSAEDLGGDVSNCILFSHD 370
           +LGD+ L IG + S S SA D  G + NCI ++ D
Sbjct: 312 TLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDD 346


>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
           gi|223532164|gb|EEF33970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 40/94 (42%), Positives = 49/94 (52%), Gaps = 17/94 (18%)
 Frame = -1

Query: 609 YLVESCGEVLLVCRYF--DPAEGGFRV---------------TRTFDVFKLDPQRMIWSK 481
           YLVES G++LLV  Y   D AEGG                  T  F VFKLD +   W +
Sbjct: 185 YLVESLGDLLLVDMYLSIDTAEGGLSFGEEFLEHLAQYMSERTVRFKVFKLDKEAQTWIE 244

Query: 480 MESLGDRVLLIGNSGSTSFSAEDLGGDVSNCILF 379
           ++SLGDRVL +G+  + S S  DL G   NCI F
Sbjct: 245 VKSLGDRVLFLGDDSTFSASVSDLSGCKGNCIFF 278


>ref|XP_003602302.1| F-box family protein [Medicago truncatula]
           gi|355491350|gb|AES72553.1| F-box family protein
           [Medicago truncatula]
          Length = 434

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
 Frame = -1

Query: 609 YLVESCGEVLLVCRYFD------PAEGGFRVTRTFDVFKLDPQRMIWSKMESLGDRVLLI 448
           +LVES G+ LL+   +D      P E G ++    DVF+LD +   W K+ SLGDRVL +
Sbjct: 275 FLVESEGDQLLLVDIYDSHCFGFPGEDGLKL----DVFRLDEKEKKWVKLASLGDRVLFL 330

Query: 447 GNSGSTSFSAEDLGGDVSNCILFSHD 370
           GN  S S SA DL     NC++FS D
Sbjct: 331 GNGCSFSASASDLSVVKGNCVIFSDD 356