BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024879
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619848.1| CCP [Medicago truncatula] gi|355494863|gb|AE...    96   3e-18
ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi...    96   3e-18
ref|XP_003629614.1| Pentatricopeptide repeat-containing protein ...    94   1e-17
ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14

>ref|XP_003619848.1| CCP [Medicago truncatula] gi|355494863|gb|AES76066.1| CCP [Medicago
           truncatula]
          Length = 556

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/113 (40%), Positives = 72/113 (63%)
 Frame = -2

Query: 361 GLDEALGLFNCLIKVRPMPSILAFDLLLGAISKMDSCSPFVFSLAKTMHFSQIQPSFDTL 182
           G+D+A+ LFN LI ++P+PS++ F+ ++G++ KM  C P   SL K M F  + PS  TL
Sbjct: 64  GIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHC-PVAISLLKQMVFKGVTPSIFTL 122

Query: 181 NIMIRSSCSSGRVDLGFCLLGTMLKRGFHPNVATLCTLLKALFMEGDLEQGRD 23
           +I I   C  G +   F +LG +LKRG+ PN  TL T++K L + G++++  D
Sbjct: 123 SIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMD 175


>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
           gi|297735515|emb|CBI17955.3| unnamed protein product
           [Vitis vinifera]
          Length = 627

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 51/134 (38%), Positives = 78/134 (58%)
 Frame = -2

Query: 406 KLENLVRNRCKSATLGLDEALGLFNCLIKVRPMPSILAFDLLLGAISKMDSCSPFVFSLA 227
           +LEN +++ CKS  +   EA  +FN LI ++P P I +F+ LLGA++K+      V SL 
Sbjct: 57  QLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFD-VISLY 115

Query: 226 KTMHFSQIQPSFDTLNIMIRSSCSSGRVDLGFCLLGTMLKRGFHPNVATLCTLLKALFME 47
           K M    + P F TLNI+I   C+  +VD G  +LG ML+RG  PN  T  +L+K L + 
Sbjct: 116 KRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLG 175

Query: 46  GDLEQGRDLLKLII 5
             + +   LL+ ++
Sbjct: 176 SRISEATGLLRKMV 189


>ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523636|gb|AET04090.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 592

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 55/129 (42%), Positives = 78/129 (60%), Gaps = 2/129 (1%)
 Frame = -2

Query: 397 NLVRNRCKSATL-GLDEALGLFNCLIKVRPMPSILAFDLLLGAISKMDSCSPFVFSLAKT 221
           N +RN+CKS  L  +DEAL  F+ + K+ P+PS++ F LLLG I KM   +  + SL K 
Sbjct: 42  NFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAI-SLVKE 100

Query: 220 MHFSQ-IQPSFDTLNIMIRSSCSSGRVDLGFCLLGTMLKRGFHPNVATLCTLLKALFMEG 44
           MH S  I+P    LN++I S C    V  GF +LGTMLK G  P+V T   L+  L ++G
Sbjct: 101 MHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKG 160

Query: 43  DLEQGRDLL 17
           D+ +  +L+
Sbjct: 161 DVGRAVELV 169


>ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 45/115 (39%), Positives = 69/115 (60%)
 Frame = -2

Query: 376 KSATLGLDEALGLFNCLIKVRPMPSILAFDLLLGAISKMDSCSPFVFSLAKTMHFSQIQP 197
           KS    +D+A+ LF  LI + P+PS++ F+++LG+I KM    P   SL+K M    I P
Sbjct: 53  KSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKH-YPTAISLSKQMGLRGITP 111

Query: 196 SFDTLNIMIRSSCSSGRVDLGFCLLGTMLKRGFHPNVATLCTLLKALFMEGDLEQ 32
           S  TL+I+I   C  G +   F +LG +LKRG+  N  TL T++K L + G++ +
Sbjct: 112 SIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRK 166


>ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/108 (38%), Positives = 67/108 (62%)
 Frame = -2

Query: 355 DEALGLFNCLIKVRPMPSILAFDLLLGAISKMDSCSPFVFSLAKTMHFSQIQPSFDTLNI 176
           ++A+ LFN ++ +RP P    F+ +L ++ KM    P   SL+K + F  I     TLNI
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRF-PTAISLSKHLDFKGITSDLVTLNI 109

Query: 175 MIRSSCSSGRVDLGFCLLGTMLKRGFHPNVATLCTLLKALFMEGDLEQ 32
           +I   C  G++ L F +L T+LKRG+HP+V TL TL+K L + G++++
Sbjct: 110 LINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKK 157