BLASTX nr result

ID: Cimicifuga21_contig00024863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024863
         (1170 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic iso...   453   e-125
ref|XP_002306080.1| predicted protein [Populus trichocarpa] gi|2...   441   e-121
emb|CAN75677.1| hypothetical protein VITISV_033052 [Vitis vinifera]   440   e-121
ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|2...   435   e-120
ref|XP_002519103.1| NAD dependent epimerase/dehydratase, putativ...   434   e-119

>ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic isoform 1 [Vitis vinifera]
            gi|297741413|emb|CBI32544.3| unnamed protein product
            [Vitis vinifera]
          Length = 529

 Score =  453 bits (1165), Expect = e-125
 Identities = 249/366 (68%), Positives = 281/366 (76%), Gaps = 6/366 (1%)
 Frame = +2

Query: 83   RKNVMLKHPFLSEQSSLTFSNIKRFPDARKPEFPRLRAQASESVKASSKPDSRTADAVNQ 262
            R    ++ PFL  Q  L   + +R PD+RK      RAQA+ + K S      T  A+  
Sbjct: 19   RSGGFIEKPFLCGQV-LRLPSSRRCPDSRKLTVLEFRAQATGTTKFSFS----TIGAIQD 73

Query: 263  EIRSKDENLVFVAGATGKVGSRTVRELLKFGFRVRAGVRSAQRAQTLVQSVKQLKLD--- 433
            +   KDE+L FVAGATG+VGSRTVRELLK GFRVRAGVR+AQ+A+ L+QSVKQ+KLD   
Sbjct: 74   KADLKDEDLAFVAGATGRVGSRTVRELLKLGFRVRAGVRTAQKAEALIQSVKQMKLDVES 133

Query: 434  --DGASAVEKLEIVECDLEQ-DRIEPAIANASVVICCIGASEKEVFDITGPYRIDYQATK 604
              +G   VEKLEIVECDLE+ D+I PA+ NASVVICCIGASEKEVFDITGPYRIDY ATK
Sbjct: 134  ASEGTQPVEKLEIVECDLEKRDQIGPALGNASVVICCIGASEKEVFDITGPYRIDYMATK 193

Query: 605  NLIDAATVAGVNHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVR 784
            NLIDAATVA VNHFILLTSLGTNK+GFPAAILNLFWGVLIWKRKAEEAL ASGLPYTIVR
Sbjct: 194  NLIDAATVAKVNHFILLTSLGTNKVGFPAAILNLFWGVLIWKRKAEEALFASGLPYTIVR 253

Query: 785  PGGMERPTDTYKETHNVSLAKEDTLFGGQVSNLQVAELLAFMTKNRELSYCKVVEVIAET 964
            PGGMERPTD YKETHN++L++EDTLFGGQVSNLQVAEL+AFM KNR  SYCKVVEVIAET
Sbjct: 254  PGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELIAFMAKNRGSSYCKVVEVIAET 313

Query: 965  TAPLTPFGELLSKLPSQRVDSSSLKEAQTARKTGAEPPQSSVPVATSSVVEKEPINTKGQ 1144
            TAPLTPFGELL+K+PSQRVD S  KE+  A      P  S  P +T   +EK P   K  
Sbjct: 314  TAPLTPFGELLAKIPSQRVDVSP-KESDAADGPAPVPVVSGPPPSTP--IEKGPPQGKAT 370

Query: 1145 TVRPSS 1162
             + P S
Sbjct: 371  AMSPLS 376


>ref|XP_002306080.1| predicted protein [Populus trichocarpa] gi|222849044|gb|EEE86591.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score =  441 bits (1133), Expect = e-121
 Identities = 230/346 (66%), Positives = 273/346 (78%), Gaps = 2/346 (0%)
 Frame = +2

Query: 131  LTFSNIKRFPDARKPEFPRLRAQASESVKASSKPDSRTADAVNQEIRSKDENLVFVAGAT 310
            L F +  +FP +RK +   ++AQAS + K  S       +A ++E+ +KDENL FVAGAT
Sbjct: 34   LKFPHFNKFPHSRKLKILDIKAQASVAAKFRSG----AVEADSKEVETKDENLAFVAGAT 89

Query: 311  GKVGSRTVRELLKFGFRVRAGVRSAQRAQTLVQSVKQLKLD-DGASAVEKLEIVECDLEQ 487
            GKVGSR VRELLK GFRVRAGVRSAQ+A+ LVQSV  +KLD +G+  VE+L+IVECDLE+
Sbjct: 90   GKVGSRAVRELLKLGFRVRAGVRSAQKAEALVQSVMAMKLDVEGSQPVERLDIVECDLEK 149

Query: 488  -DRIEPAIANASVVICCIGASEKEVFDITGPYRIDYQATKNLIDAATVAGVNHFILLTSL 664
             ++I PA+ NASV++CCIGA EKEVFD+TGPYRIDY ATKNL+DAAT   VNHFI+++SL
Sbjct: 150  PNQIGPALGNASVLLCCIGAGEKEVFDVTGPYRIDYLATKNLVDAATATKVNHFIMVSSL 209

Query: 665  GTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGMERPTDTYKETHNVSLA 844
            GTNK+GFPAAILNLFWGVLIWKRKAEEALIASG+PYTIVRPGGMERPTD YKETHN++L+
Sbjct: 210  GTNKVGFPAAILNLFWGVLIWKRKAEEALIASGVPYTIVRPGGMERPTDAYKETHNITLS 269

Query: 845  KEDTLFGGQVSNLQVAELLAFMTKNRELSYCKVVEVIAETTAPLTPFGELLSKLPSQRVD 1024
            +EDTLFGG VSNLQVAEL+AFM  NR LSYCKVVEVIAETTAPLTP  ELL+K+PSQRV+
Sbjct: 270  EEDTLFGGLVSNLQVAELMAFMANNRRLSYCKVVEVIAETTAPLTPMDELLAKIPSQRVE 329

Query: 1025 SSSLKEAQTARKTGAEPPQSSVPVATSSVVEKEPINTKGQTVRPSS 1162
                KE + A      PP+   P A SS  +KEP   K    RP S
Sbjct: 330  P---KEPEAADVPKPVPPKVVEPKAPSSPSQKEPAQAKAMVTRPLS 372


>emb|CAN75677.1| hypothetical protein VITISV_033052 [Vitis vinifera]
          Length = 535

 Score =  440 bits (1132), Expect = e-121
 Identities = 249/387 (64%), Positives = 281/387 (72%), Gaps = 27/387 (6%)
 Frame = +2

Query: 83   RKNVMLKHPFLSEQSSLTFSNIKRFPDARKPEFPRLRAQASESVKASSKPDSRTADAVNQ 262
            R    ++ PFL  Q  L   + +R PD+RK      RAQA+ + K S      T  A+  
Sbjct: 19   RSGGFIEKPFLCGQV-LRLPSSRRCPDSRKLTVLEFRAQATGTTKFSFS----TIGAIQD 73

Query: 263  EIRSKDENLVFVAGATGKVGSRTVRELLKFGFRVRAGVRSAQRAQTLVQSVKQLKLD--- 433
            +   KDE+L FVAGATG+VGSRTVRELLK GFRVRAGVR+AQ+A+ L+QSVKQ+KLD   
Sbjct: 74   KADLKDEDLAFVAGATGRVGSRTVRELLKLGFRVRAGVRTAQKAEALIQSVKQMKLDVES 133

Query: 434  --DGASAVEKLEIVECDLEQ-DRIEPAIANASVVICCIGASEKEVFDITGPYRIDYQATK 604
              +G   VEKLEIVECDLE+ D+I PA+ NASVVICCIGASEKEVFDITGPYRIDY ATK
Sbjct: 134  ASEGTQPVEKLEIVECDLEKRDQIGPALGNASVVICCIGASEKEVFDITGPYRIDYMATK 193

Query: 605  NLIDAATVAGVNHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVR 784
            NLIDAATVA VNHFILLTSLGTNK+GFPAAILNLFWGVLIWKRKAEEAL ASGLPYTIVR
Sbjct: 194  NLIDAATVAKVNHFILLTSLGTNKVGFPAAILNLFWGVLIWKRKAEEALFASGLPYTIVR 253

Query: 785  PGGMERPTDTYKETHNVSLAKEDTLFGGQVSNL---------------------QVAELL 901
            PGGMERPTD YKETHN++L++EDTLFGGQVSNL                     QVAEL+
Sbjct: 254  PGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQMQTWLKKLNATPKVTFVNKFQVAELI 313

Query: 902  AFMTKNRELSYCKVVEVIAETTAPLTPFGELLSKLPSQRVDSSSLKEAQTARKTGAEPPQ 1081
            AFM KNR  SYCKVVEVIAETTAPLTPFGELL+K+PSQRVD S  KE+  A      P  
Sbjct: 314  AFMAKNRGSSYCKVVEVIAETTAPLTPFGELLAKIPSQRVDVSP-KESDAADGPXPVPVV 372

Query: 1082 SSVPVATSSVVEKEPINTKGQTVRPSS 1162
            S  P +T   +EK P   K   + P S
Sbjct: 373  SGPPPSTP--IEKGPPQGKATAMSPLS 397


>ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|222849476|gb|EEE87023.1|
            predicted protein [Populus trichocarpa]
          Length = 564

 Score =  435 bits (1119), Expect = e-120
 Identities = 227/346 (65%), Positives = 274/346 (79%), Gaps = 2/346 (0%)
 Frame = +2

Query: 131  LTFSNIKRFPDARKPEFPRLRAQASESVKASSKPDSRTADAVNQEIRSKDENLVFVAGAT 310
            L F N+ +F  +RK +   ++AQAS              +A+++E+ +KDENL FVAGAT
Sbjct: 34   LKFPNLSKFAHSRKLKILDIKAQAS-------------VEAISKEMETKDENLAFVAGAT 80

Query: 311  GKVGSRTVRELLKFGFRVRAGVRSAQRAQTLVQSVKQLKLD-DGASAVEKLEIVECDLEQ 487
            GKVGSR VRELLK GFRVRAGVRSAQ+A+ L QSVK++KLD +G+  VE+LE VECDLE+
Sbjct: 81   GKVGSRAVRELLKLGFRVRAGVRSAQKAEALAQSVKEMKLDVEGSQPVERLETVECDLEK 140

Query: 488  -DRIEPAIANASVVICCIGASEKEVFDITGPYRIDYQATKNLIDAATVAGVNHFILLTSL 664
             ++I PA+ NASVV+CCIGASEKEVFD+TGP RIDY+ATKNL+DAATVA V+HFI+++SL
Sbjct: 141  PNQIGPALGNASVVLCCIGASEKEVFDVTGPCRIDYRATKNLVDAATVAKVDHFIMVSSL 200

Query: 665  GTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGMERPTDTYKETHNVSLA 844
            GTNK GFPAAILNLFWGVLIWKRKAEEALIASG+PYTIVRPGGMERPTD YKETHN++++
Sbjct: 201  GTNKFGFPAAILNLFWGVLIWKRKAEEALIASGVPYTIVRPGGMERPTDAYKETHNLTVS 260

Query: 845  KEDTLFGGQVSNLQVAELLAFMTKNRELSYCKVVEVIAETTAPLTPFGELLSKLPSQRVD 1024
            +EDTLFGGQVSNLQVAE +AFM KNR LSYCKVVEVIAETTAPLTP  ELL+K+PSQRV+
Sbjct: 261  EEDTLFGGQVSNLQVAEFMAFMAKNRGLSYCKVVEVIAETTAPLTPMDELLAKIPSQRVE 320

Query: 1025 SSSLKEAQTARKTGAEPPQSSVPVATSSVVEKEPINTKGQTVRPSS 1162
                K++  A    + PP+   P A S   ++EP   K    RP S
Sbjct: 321  P---KKSDAAELPKSVPPKIVEPEAPSPPSQREPAQAKAVVTRPLS 363


>ref|XP_002519103.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
            gi|223541766|gb|EEF43314.1| NAD dependent
            epimerase/dehydratase, putative [Ricinus communis]
          Length = 584

 Score =  434 bits (1116), Expect = e-119
 Identities = 237/365 (64%), Positives = 281/365 (76%), Gaps = 6/365 (1%)
 Frame = +2

Query: 86   KNVMLKHPFLSEQSSLTFSNIKRFPDARKPEFPRLRAQASESVKASSKPDSRTADAVNQE 265
            K+  L   FL  Q  + FS+  ++P ARK     ++AQAS   K SS       +A+ +E
Sbjct: 20   KSGFLHKTFLHGQL-IRFSSFSKYPHARKIRTFGIKAQASGVTKFSSG----AIEAIPKE 74

Query: 266  IRSKDENLVFVAGATGKVGSRTVRELLKFGFRVRAGVRSAQRAQTLVQSVKQLKLD-DGA 442
               KD+NL FVAGATG+VGSRTVRELLK GF+VRAGVRSAQRAQTLVQSVKQ+KLD +GA
Sbjct: 75   TDIKDDNLAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQRAQTLVQSVKQMKLDGEGA 134

Query: 443  SAVEKLEIVECDLEQ-DRIEPAIANASVVICCIGASEKEVFDITGPYRIDYQATKNLIDA 619
              +EK EI+ECDL++ + I  A+ NAS+VICCIGA EKEVFD TGPYRIDYQAT+NLIDA
Sbjct: 135  QPIEKFEIIECDLDKPNEIGAALGNASIVICCIGAGEKEVFDFTGPYRIDYQATRNLIDA 194

Query: 620  ATVAGVNHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGME 799
            ATVA V HFI+++SLGTNK+GFPAAILNLFWGVL WKRKAEEALIASG+PYTIVRPGGME
Sbjct: 195  ATVAKVKHFIMVSSLGTNKVGFPAAILNLFWGVLFWKRKAEEALIASGIPYTIVRPGGME 254

Query: 800  RPTDTYKETHNVSLAKEDTLFGGQVSNLQVAELLAFMTKNRELSYCKVVEVIAETTAPLT 979
            RPTD YKETHN++L++EDTLFGGQVSNLQVAEL+A M KN +LSYCKVVEVIAETTAPLT
Sbjct: 255  RPTDAYKETHNITLSEEDTLFGGQVSNLQVAELMAVMAKNLDLSYCKVVEVIAETTAPLT 314

Query: 980  PFGELLSKLPSQRVDSSSLKEAQTARKTGAEPPQSS--VPVAT--SSVVEKEPINTKGQT 1147
               +LL+++PSQR+     K  + A   G EP  S+  VP A+  +S +EKEP   K   
Sbjct: 315  TMDKLLTRIPSQRI-----KPKEPAAAEGPEPAPSTKVVPEASEPTSAIEKEPEQPKATV 369

Query: 1148 VRPSS 1162
             RP S
Sbjct: 370  SRPLS 374


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