BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024846
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594393.1| F-box protein [Medicago truncatula] gi|35548...    92   1e-16
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    92   2e-16
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...    91   3e-16
ref|XP_003598441.1| F-box/kelch-repeat protein [Medicago truncat...    90   6e-16
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    89   1e-15

>ref|XP_003594393.1| F-box protein [Medicago truncatula] gi|355483441|gb|AES64644.1|
           F-box protein [Medicago truncatula]
          Length = 704

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 82/271 (30%), Positives = 130/271 (47%), Gaps = 9/271 (3%)
 Frame = -1

Query: 790 LPPEVTTDILSRLPFRSTAQCRCVSKLWCSLLSDSKFPSLQLTQLSKISPDLLLYHLHLD 611
           LPP++  +I SRLP +S  + R  SK   SL+   KF +L L   + ++ +L+L H   +
Sbjct: 5   LPPDILAEIFSRLPVKSLLRFRSTSKSLKSLIDSLKFINLHLK--NSLNFNLILRH---N 59

Query: 610 GTRIYYLEDNEEAFNKIP--------IKPFKLFDTDFINNSFYRISIIFGSCNGIVFLSE 455
            T  Y L       + IP        I P     TD + NS  ++S+I GSCNG++ +S 
Sbjct: 60  TTDFYQLHFPNLTKSIIPLNYPFTTNIDPSTRSPTDLLRNS--KMSLI-GSCNGLLAIST 116

Query: 454 LNIPDKSLLPKNPIYAFNPVTEQHSKLPSFTIPERYVPDWASLSNRDKKIDLCLSGSGFE 275
             I        N I  +NP T +H  +P   +P   +P    + N D K  LC+ G GF+
Sbjct: 117 GVIVFTHPNNLNEITIWNPNTRKHHIIPFLPLP---IP----ILNYDDKCSLCVHGFGFD 169

Query: 274 ASSNKFKLVLVIFTARDYVSQIFNNEVQVHTLGSTTWERKHGVVPDVLRQANGLVS-STF 98
             S  +KL L I    D  +  ++ +V++ +L + +W+    ++P +      L     F
Sbjct: 170 QISGDYKL-LRISHLLDLQNPFYDPQVRLFSLKTNSWK----IIPAMPYDLQHLYDLGVF 224

Query: 97  VNGSLHWITVDQTSSKDDPLIVSFHLGVEEF 5
           V  S+HWI   +       LIV+F+L +E F
Sbjct: 225 VENSIHWIMTKKLDGLHPSLIVAFNLTLEIF 255


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 16/289 (5%)
 Frame = -1

Query: 823 DQQPT*TKMERLPPEVTTDILSRLPFRSTAQCRCVSKLWCSLLSDSKFPSLQLTQLSKIS 644
           +  P  T ME LP E+  DILSRLP  S  Q +CV + W +L+ D +   L L+  ++ +
Sbjct: 17  EYDPQTTGMELLPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDT 76

Query: 643 --PDLLLYHLHLDGTRIYYL-----EDNEEAFNKIPIKPFKLFDTDFINNSFYRISIIFG 485
             P L+L+        +Y++     E+ +E   +IP  PF     +F          + G
Sbjct: 77  DHPCLILHCDFPIRNNLYFVDFAAHEEEKEKVKRIP-APFSSMMPEF---------EVVG 126

Query: 484 SCNGIVFLSELNIPDKSLLPKNPIYAFNPVTEQHSKLPSFTIPERYVPDWASLSNRDKKI 305
           SCNG++ LS+        L  + +Y +NP T  + +LP             SL   D+++
Sbjct: 127 SCNGLLCLSD-------SLYNDSLYIYNPFTGCYKELPK------------SLQYPDQEV 167

Query: 304 DLCLSGSGFEASSNKFKLVLVIF---------TARDYVSQIFNNEVQVHTLGSTTWERKH 152
              +SG GF   + ++K++ +++          +R  +  +  +EVQ+ TLG   W    
Sbjct: 168 ---VSGFGFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYPL--SEVQILTLGCPEWRSLG 222

Query: 151 GVVPDVLRQANGLVSSTFVNGSLHWITVDQTSSKDDPLIVSFHLGVEEF 5
            V   ++R+A+G      VNG LHWI+     +K    +VSF L  E+F
Sbjct: 223 KVSYRLVRRASG----ALVNGRLHWIS-RPCRNKPARRLVSFDLTDEQF 266


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 82/266 (30%), Positives = 124/266 (46%), Gaps = 2/266 (0%)
 Frame = -1

Query: 796 ERLPPEVTTDILSRLPFRSTAQCRCVSKLWCSLLSDSKFPSLQLTQ-LSKISPDLLLYHL 620
           + LP EV TDILSRLP +S  + R  SK W SL+    F S+ L++ LS  S   L+  L
Sbjct: 3   DHLPREVVTDILSRLPAKSLLRFRSTSKSWKSLIDSQHFNSVHLSRSLSLTSNTTLILRL 62

Query: 619 HLDGTRIYYLEDNEEAFNKIPIKPFKLFDTDFINNSFYRISIIFGSCNGIVFLSELNIPD 440
             D  +  +   +   F   P+  +        NN       + GSCNG++ +S  N+ D
Sbjct: 63  DSDLYQTNFPTLDPPLFLNHPLMCYS-------NN-----ITLLGSCNGLLCIS--NVAD 108

Query: 439 KSLLPKNPIYAFNPVTEQHSKLPSFTIPERYV-PDWASLSNRDKKIDLCLSGSGFEASSN 263
                   I  +NP   QH  LPS  +P R + PD    + R       + G GF+ +S 
Sbjct: 109 -------DIAFWNPSLRQHRILPSLPLPRRRLHPDTTLFAAR-------VYGFGFDHTSP 154

Query: 262 KFKLVLVIFTARDYVSQIFNNEVQVHTLGSTTWERKHGVVPDVLRQANGLVSSTFVNGSL 83
            +KLV + +   D   + F+++V+++TL +  W+     +P  L  A  +    FV  SL
Sbjct: 155 DYKLVRISYFV-DLQDRSFDSQVKLYTLRANAWKTLPS-MPYALCCARTM--GVFVGNSL 210

Query: 82  HWITVDQTSSKDDPLIVSFHLGVEEF 5
           HW+   +       LIV+F L  E F
Sbjct: 211 HWVVTRKLEPDQPDLIVAFDLTHEIF 236


>ref|XP_003598441.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487489|gb|AES68692.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 413

 Score = 90.1 bits (222), Expect = 6e-16
 Identities = 87/270 (32%), Positives = 121/270 (44%), Gaps = 8/270 (2%)
 Frame = -1

Query: 790 LPPEVTTDILSRLPFRSTAQCRCVSKLWCSLLSDSKFPSLQLTQLSKISPDLLLY-HLHL 614
           LP +V  +IL RLP +   Q RCV K W SL+SD KF   QL   +  +   LLY H   
Sbjct: 44  LPSDVIPEILCRLPVKFILQFRCVCKSWNSLISDPKFVKKQLNVSTARNIHFLLYDHTRY 103

Query: 613 DGTRIYYLEDNEEAFNKIPIKPFKLFDTDFINNSFYRISII---FGSCNGIVFLSELNIP 443
            G  I   E  +  F  I     +   +    N  Y  SI+    GSCNGI+ +++    
Sbjct: 104 LGKYILLSEPIDSIFTNITSNSTRFEYSPNGFNGDYPRSILHDFVGSCNGILCIADDY-- 161

Query: 442 DKSLLPKNPIYAFNPVTEQHSKLPSFTIPERYVPDWASLSNRDKKIDLCLSGSGFEASSN 263
                 K  +  +NP   +  +LP F  P  YV +   +S           G G+ +S +
Sbjct: 162 ------KGLVILWNPSIRKFKELPLFQKP--YVRNHIHMS----------FGFGYNSSKD 203

Query: 262 KFK--LVLVIFTARDYVSQIFNNEVQVHTLGSTTWERKHGVVPDVLRQANGLVSSTFVNG 89
            +K  +VLV F  RD  + I   EV+VHTLG+  W R     P  L  A    S  FV+G
Sbjct: 204 NYKVVVVLVYFIYRDIKTDI-KTEVEVHTLGTNFWRRSTQEYP--LGGAPFERSGKFVSG 260

Query: 88  SLHWITVDQTSSKD--DPLIVSFHLGVEEF 5
           +++W+   +  S       IVSF L  E F
Sbjct: 261 TINWLFSKKIKSGRVCPCFIVSFDLAKETF 290


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 80/276 (28%), Positives = 125/276 (45%), Gaps = 11/276 (3%)
 Frame = -1

Query: 799 MERLPPEVTTDILSRLPFRSTAQCRCVSKLWCSLLSDSKFPSLQLTQLSKISPDLLLYHL 620
           MERLP ++  DILSRLP  S  Q R V + W  +  DS   S  L + ++ +P L+L+  
Sbjct: 27  MERLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLCRTAQYNPCLILHCD 86

Query: 619 HLDGTRIYYLEDNEEAFNKIPIK----PFKLFDTDFINNSFYRISIIFGSCNGIVFLSEL 452
           +    +I +++ + E+ +K  ++    PF     +F          + GSCNG++ L++ 
Sbjct: 87  YPIRNQISFVDISAESRDKDMVRKLTIPFWASMPEF---------EVVGSCNGLLCLAD- 136

Query: 451 NIPDKSLLPKNPIYAFNPVTEQHSKLPSFTIPERYVPDWASLSNRDKKIDLCLSGSGFEA 272
                  L K+ +Y  NP T    +LP             SL   D+++   + G G+  
Sbjct: 137 ------SLFKDAVYVHNPFTRDFKQLPK------------SLQYPDQEV---VFGFGYHP 175

Query: 271 SSNKFKLVLVIFTARDYVS-------QIFNNEVQVHTLGSTTWERKHGVVPDVLRQANGL 113
            +  +K+V V++    Y             +EVQV TLGS TW      +  V  Q +  
Sbjct: 176 MTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRS----LGKVSYQLDRW 231

Query: 112 VSSTFVNGSLHWITVDQTSSKDDPLIVSFHLGVEEF 5
            S   VNG LHW+T  +        IVSF L  E+F
Sbjct: 232 PSEALVNGRLHWVT--RPRRYVTRFIVSFDLADEQF 265