BLASTX nr result

ID: Cimicifuga21_contig00024820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024820
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27138.3| unnamed protein product [Vitis vinifera]              199   3e-49
ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyra...   194   5e-48
ref|NP_197702.1| C3HC4-type RING finger domain-containing protei...   194   5e-48
ref|XP_002527141.1| protein binding protein, putative [Ricinus c...   191   4e-47
ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like ...   187   1e-45

>emb|CBI27138.3| unnamed protein product [Vitis vinifera]
          Length = 3960

 Score =  199 bits (505), Expect = 3e-49
 Identities = 96/109 (88%), Positives = 103/109 (94%)
 Frame = +1

Query: 181 EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVSLCLDRRVHGVDSLLSDK 360
           EDFGQ+VDLTRRIREVL+NYPEGTTVLKELIQNADDAGATKV LCLDRRVHG +SLLS+K
Sbjct: 18  EDFGQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGSESLLSEK 77

Query: 361 LNEWQGPALLAFNDAEFTEEDFVSISRIGGSKKQGQGWKTGRFGVGFNS 507
           L +WQGPALLA+N+AEFTEEDFVSISRIGGS K GQ WKTGRFGVGFNS
Sbjct: 78  LAQWQGPALLAYNNAEFTEEDFVSISRIGGSNKHGQAWKTGRFGVGFNS 126



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/66 (50%), Positives = 48/66 (72%)
 Frame = +1

Query: 247  GTTVLKELIQNADDAGATKVSLCLDRRVHGVDSLLSDKLNEWQGPALLAFNDAEFTEEDF 426
            G  +L EL+QNA+DAGA++V   LD+  +G  S+LS ++ +WQGPAL  FND+ F+ +D 
Sbjct: 932  GPGILFELVQNAEDAGASEVIFLLDKTQYGTSSILSPEMADWQGPALYCFNDSVFSPQDL 991

Query: 427  VSISRI 444
             +ISRI
Sbjct: 992  YAISRI 997


>ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317873|gb|EFH48295.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 4711

 Score =  194 bits (494), Expect = 5e-48
 Identities = 95/109 (87%), Positives = 100/109 (91%)
 Frame = +1

Query: 181 EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVSLCLDRRVHGVDSLLSDK 360
           EDFGQ+VDLTRRIREVL+NYPEGTTVLKELIQNADDAGATKV LCLDRRVHG  SLLSD 
Sbjct: 7   EDFGQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVRLCLDRRVHGSGSLLSDS 66

Query: 361 LNEWQGPALLAFNDAEFTEEDFVSISRIGGSKKQGQGWKTGRFGVGFNS 507
           L +WQGP+LLA+NDA FTEEDFVSISRIGGS K GQ WKTGRFGVGFNS
Sbjct: 67  LAQWQGPSLLAYNDAVFTEEDFVSISRIGGSGKHGQAWKTGRFGVGFNS 115



 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/108 (48%), Positives = 76/108 (70%)
 Frame = +1

Query: 181  EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVSLCLDRRVHGVDSLLSDK 360
            E FGQ   LT R++ +L  Y +G  +L EL+QNA+DAGA++V+  LD+  +G  SLLS +
Sbjct: 1379 EAFGQHEALTTRLKHILEMYADGPGILFELVQNAEDAGASEVTFLLDKTHYGTSSLLSPE 1438

Query: 361  LNEWQGPALLAFNDAEFTEEDFVSISRIGGSKKQGQGWKTGRFGVGFN 504
            + +WQGPAL  FN++ FT++D  +ISRIG + K  + +  GRFG+GFN
Sbjct: 1439 MADWQGPALYCFNNSVFTQQDMYAISRIGQASKLEKPFAIGRFGLGFN 1486


>ref|NP_197702.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
           thaliana] gi|9759369|dbj|BAB09828.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332005740|gb|AED93123.1| C3HC4-type RING finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 4706

 Score =  194 bits (494), Expect = 5e-48
 Identities = 95/109 (87%), Positives = 100/109 (91%)
 Frame = +1

Query: 181 EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVSLCLDRRVHGVDSLLSDK 360
           EDFGQ+VDLTRRIREVL+NYPEGTTVLKELIQNADDAGATKV LCLDRRVHG  SLLSD 
Sbjct: 7   EDFGQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVRLCLDRRVHGSGSLLSDS 66

Query: 361 LNEWQGPALLAFNDAEFTEEDFVSISRIGGSKKQGQGWKTGRFGVGFNS 507
           L +WQGP+LLA+NDA FTEEDFVSISRIGGS K GQ WKTGRFGVGFNS
Sbjct: 67  LAQWQGPSLLAYNDAVFTEEDFVSISRIGGSGKHGQAWKTGRFGVGFNS 115



 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/108 (48%), Positives = 76/108 (70%)
 Frame = +1

Query: 181  EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVSLCLDRRVHGVDSLLSDK 360
            E FGQ   LT R++ +L  Y +G  +L EL+QNA+DAGA++V+  LD+  +G  SLLS +
Sbjct: 1379 EAFGQHEALTTRLKHILEMYADGPGILFELVQNAEDAGASEVTFLLDKTHYGTSSLLSPE 1438

Query: 361  LNEWQGPALLAFNDAEFTEEDFVSISRIGGSKKQGQGWKTGRFGVGFN 504
            + +WQGPAL  FN++ FT++D  +ISRIG + K  + +  GRFG+GFN
Sbjct: 1439 MADWQGPALYCFNNSVFTQQDMYAISRIGQASKLEKPFAIGRFGLGFN 1486


>ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]
           gi|223533501|gb|EEF35243.1| protein binding protein,
           putative [Ricinus communis]
          Length = 4704

 Score =  191 bits (486), Expect = 4e-47
 Identities = 92/109 (84%), Positives = 100/109 (91%)
 Frame = +1

Query: 181 EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVSLCLDRRVHGVDSLLSDK 360
           EDFGQ+VDLTRRIREVL+NYPEGTTVLKELIQNADDAGATKV LCLDRR+H  DS++S  
Sbjct: 15  EDFGQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVRLCLDRRLHRSDSIISTS 74

Query: 361 LNEWQGPALLAFNDAEFTEEDFVSISRIGGSKKQGQGWKTGRFGVGFNS 507
           L++WQGPALLA+NDA FTEEDFVSISRIGGS K GQ WKTGRFGVGFNS
Sbjct: 75  LSQWQGPALLAYNDAVFTEEDFVSISRIGGSAKHGQAWKTGRFGVGFNS 123



 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/108 (47%), Positives = 72/108 (66%)
 Frame = +1

Query: 181  EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVSLCLDRRVHGVDSLLSDK 360
            E FGQ   LT R++ +L  Y +G  +L EL+QNA+DAGA++V   LD+  +G  S+LS +
Sbjct: 1385 EAFGQHEALTTRLKHILEMYADGPGILFELVQNAEDAGASEVIFLLDKTQYGTSSVLSPE 1444

Query: 361  LNEWQGPALLAFNDAEFTEEDFVSISRIGGSKKQGQGWKTGRFGVGFN 504
            + +WQGPAL  FND+ F+ +D  +ISRIG   K  +    GRFG+GFN
Sbjct: 1445 MADWQGPALYCFNDSVFSPQDLYAISRIGQESKLEKPLAIGRFGLGFN 1492


>ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like [Cucumis sativus]
          Length = 3586

 Score =  187 bits (474), Expect = 1e-45
 Identities = 92/109 (84%), Positives = 99/109 (90%)
 Frame = +1

Query: 181 EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVSLCLDRRVHGVDSLLSDK 360
           EDFGQ+VDLTRRIREVL+NYPEGTTVLKEL+QNADDAGATKV LCLDRRVHG +SLLS  
Sbjct: 14  EDFGQKVDLTRRIREVLLNYPEGTTVLKELVQNADDAGATKVCLCLDRRVHGRESLLSAS 73

Query: 361 LNEWQGPALLAFNDAEFTEEDFVSISRIGGSKKQGQGWKTGRFGVGFNS 507
           L  +QGPALLA+N+A FTEEDFVSISRIGGS K GQ WKTGRFGVGFNS
Sbjct: 74  LAPFQGPALLAYNNAVFTEEDFVSISRIGGSNKHGQAWKTGRFGVGFNS 122



 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/108 (46%), Positives = 72/108 (66%)
 Frame = +1

Query: 181  EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVSLCLDRRVHGVDSLLSDK 360
            E FGQ   LT R+R +L  Y +G  +L ELIQNA+DAG+++V   LD+  +G  S+LS +
Sbjct: 1386 EAFGQHEALTNRLRHILDMYADGPGILFELIQNAEDAGSSEVIFLLDKTHYGTSSVLSPE 1445

Query: 361  LNEWQGPALLAFNDAEFTEEDFVSISRIGGSKKQGQGWKTGRFGVGFN 504
            + +WQGPAL  +ND+ F+ +D  +ISR+G   K  +    GRFG+GFN
Sbjct: 1446 MADWQGPALYCYNDSVFSPQDLYAISRVGQESKLQKPLSIGRFGLGFN 1493


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