BLASTX nr result

ID: Cimicifuga21_contig00024808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024808
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADC79696.1| APETALA3-like protein [Euptelea pleiosperma] gi|3...    65   6e-09
emb|CCC54332.1| MADS box protein, partial [Eschscholzia californ...    64   1e-08
dbj|BAJ53191.1| JMS09K11.9 [Jatropha curcas]                           64   2e-08
gb|ADU56835.1| MADS-box protein GLO subfamily [Coffea arabica]         63   2e-08
gb|ABN55895.1| DEFICIENS, partial [Eschscholzia californica]           63   2e-08

>gb|ADC79696.1| APETALA3-like protein [Euptelea pleiosperma]
           gi|333952847|gb|AEG25813.1| APETALA3-like protein
           [Euptelea pleiosperma]
          Length = 223

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
 Frame = +2

Query: 161 NSWKRNVSYYKRNAGIMKNAQQITVLCDAAVYLFIFFESGDLSEYISPSTSA----STYR 328
           NS  R V+Y KR AGIMK AQ++TVLCDA V L +F  +G L E+ISPSTS       Y+
Sbjct: 13  NSTNRQVTYSKRRAGIMKKAQELTVLCDAEVSLIMFSNTGKLFEFISPSTSTKKIFDRYQ 72

Query: 329 QCQTLGL 349
             Q + L
Sbjct: 73  HAQGINL 79


>emb|CCC54332.1| MADS box protein, partial [Eschscholzia californica]
          Length = 229

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
 Frame = +2

Query: 161 NSWKRNVSYYKRNAGIMKNAQQITVLCDAAVYLFIFFESGDLSEYISPSTSA----STYR 328
           NS  R V+Y KR AGI K A+++TVLCDA V L IF  +G ++EYISPS S       Y+
Sbjct: 13  NSTNRQVTYSKRRAGIFKKARELTVLCDAEVSLIIFSSTGKVTEYISPSISQKKLFDRYQ 72

Query: 329 QCQTLGLTE 355
           Q Q + L E
Sbjct: 73  QVQQIDLWE 81


>dbj|BAJ53191.1| JMS09K11.9 [Jatropha curcas]
          Length = 211

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = +2

Query: 161 NSWKRNVSYYKRNAGIMKNAQQITVLCDAAVYLFIFFESGDLSEYISPSTS 313
           N+  R V+Y KR AGIMK A++ITVLCDA V L IF  SG + EY SPSTS
Sbjct: 13  NTSNRQVTYSKRRAGIMKKAKEITVLCDAQVSLVIFASSGKMHEYCSPSTS 63


>gb|ADU56835.1| MADS-box protein GLO subfamily [Coffea arabica]
          Length = 210

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = +2

Query: 161 NSWKRNVSYYKRNAGIMKNAQQITVLCDAAVYLFIFFESGDLSEYISPSTS 313
           NS  R V+Y KR  GIMK A++ITVLCDA V L IF  SG + EYISPST+
Sbjct: 13  NSNNRQVTYSKRRTGIMKKAKEITVLCDAKVSLIIFGTSGKMHEYISPSTN 63


>gb|ABN55895.1| DEFICIENS, partial [Eschscholzia californica]
          Length = 226

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/51 (60%), Positives = 37/51 (72%)
 Frame = +2

Query: 161 NSWKRNVSYYKRNAGIMKNAQQITVLCDAAVYLFIFFESGDLSEYISPSTS 313
           NS  R V+Y KR AGIMK A+++TVLCDA V L +F  +G  SEYISPS S
Sbjct: 13  NSTNRQVTYSKRRAGIMKKARELTVLCDAEVSLIMFSTTGKFSEYISPSVS 63


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