BLASTX nr result

ID: Cimicifuga21_contig00024801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024801
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18489.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002273399.2| PREDICTED: LRR receptor-like serine/threonin...    74   9e-12
gb|ADU18533.1| verticillium wilt resistance-like protein [Gossyp...    74   9e-12
ref|XP_002318355.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
emb|CBI25201.3| unnamed protein product [Vitis vinifera]               73   2e-11

>emb|CBI18489.3| unnamed protein product [Vitis vinifera]
          Length = 1344

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/76 (52%), Positives = 52/76 (68%)
 Frame = -2

Query: 231  GTVPKSIGQLSELRELDLSYNQFSGTVPKSIRQLSELRRLSLGFNSFQGFVSEDHFAKLS 52
            G++P SIGQLS+L+ L +S N  SG++P SI QLS+L +L +  N   G +SE HF KLS
Sbjct: 1084 GSLPDSIGQLSQLQGLHVSSNHLSGSLPDSIGQLSQLEQLDVSSNHLSGSLSEQHFLKLS 1143

Query: 51   RLEYLNMRSNPLVLKV 4
            +LEYL M SN   L V
Sbjct: 1144 KLEYLYMGSNSFHLNV 1159



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/72 (45%), Positives = 49/72 (68%)
 Frame = -2

Query: 231  GTVPKSIGQLSELRELDLSYNQFSGTVPKSIRQLSELRRLSLGFNSFQGFVSEDHFAKLS 52
            G++P SIGQLS+L +LD+S N  SG++P SI QLS+L+ L +  N   G +  D   +LS
Sbjct: 1036 GSLPDSIGQLSQLEQLDVSSNHLSGSLPDSIGQLSQLQGLQVSSNHLSGSL-PDSIGQLS 1094

Query: 51   RLEYLNMRSNPL 16
            +L+ L++ SN L
Sbjct: 1095 QLQGLHVSSNHL 1106


>ref|XP_002273399.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           FLS2-like [Vitis vinifera]
          Length = 1007

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/71 (47%), Positives = 50/71 (70%)
 Frame = -2

Query: 231 GTVPKSIGQLSELRELDLSYNQFSGTVPKSIRQLSELRRLSLGFNSFQGFVSEDHFAKLS 52
           G +P  IG L  ++ LDLS+N  +GT+P+SI QL EL  L LG+NS++G +SE HF+ L+
Sbjct: 387 GPIPTWIGNLLRMKRLDLSFNLMNGTIPESIGQLRELTELFLGWNSWEGVISEIHFSNLT 446

Query: 51  RLEYLNMRSNP 19
           +LEY +   +P
Sbjct: 447 KLEYFSSHLSP 457


>gb|ADU18533.1| verticillium wilt resistance-like protein [Gossypium barbadense]
          Length = 1020

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/75 (49%), Positives = 51/75 (68%)
 Frame = -2

Query: 231 GTVPKSIGQLSELRELDLSYNQFSGTVPKSIRQLSELRRLSLGFNSFQGFVSEDHFAKLS 52
           G++P S+G L+ LR LDLS N+ +GT+P+SI QL ++ +L L  N  +G VSE HFA L+
Sbjct: 437 GSIPASLGLLASLRTLDLSQNRVNGTLPESIGQLWKMEKLWLSHNMLEGVVSEVHFANLT 496

Query: 51  RLEYLNMRSNPLVLK 7
           RL       NPLVL+
Sbjct: 497 RLRLFQASGNPLVLE 511


>ref|XP_002318355.1| predicted protein [Populus trichocarpa] gi|222859028|gb|EEE96575.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/75 (49%), Positives = 53/75 (70%)
 Frame = -2

Query: 231 GTVPKSIGQLSELRELDLSYNQFSGTVPKSIRQLSELRRLSLGFNSFQGFVSEDHFAKLS 52
           G +P  I + S LRELD+SYN+ +G +P+SI  LS+L    + FNSFQG VS +HF+ LS
Sbjct: 225 GPLP-DIARFSSLRELDISYNRLNGCIPESIGFLSKLEHFDVSFNSFQGVVSGEHFSNLS 283

Query: 51  RLEYLNMRSNPLVLK 7
           +L+ L++  N LVL+
Sbjct: 284 KLQNLDLSYNSLVLR 298


>emb|CBI25201.3| unnamed protein product [Vitis vinifera]
          Length = 361

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/76 (48%), Positives = 48/76 (63%)
 Frame = -2

Query: 231 GTVPKSIGQLSELRELDLSYNQFSGTVPKSIRQLSELRRLSLGFNSFQGFVSEDHFAKLS 52
           G +P S+  L  L  L +  N+ +G++P SI QLSEL+ L +G N   G +SE HF KLS
Sbjct: 215 GPIPASLWTLQHLESLSIGMNELNGSLPDSIGQLSELQLLDVGSNQLSGSLSEQHFWKLS 274

Query: 51  RLEYLNMRSNPLVLKV 4
           +LEYLNM SN   L V
Sbjct: 275 KLEYLNMDSNSFRLNV 290


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