BLASTX nr result

ID: Cimicifuga21_contig00024750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024750
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266249.1| PREDICTED: probable disease resistance prote...    67   2e-09
ref|XP_002281180.1| PREDICTED: disease resistance protein RPS5-l...    66   3e-09
gb|ACP30566.1| disease resistance protein [Brassica rapa subsp. ...    62   4e-08
gb|ACP30558.1| disease resistance protein [Brassica rapa subsp. ...    62   4e-08
ref|XP_002281245.2| PREDICTED: disease resistance protein RFL1-l...    62   6e-08

>ref|XP_002266249.1| PREDICTED: probable disease resistance protein At5g63020-like
           [Vitis vinifera]
          Length = 920

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
 Frame = +2

Query: 2   SYNNLRDTIVKNGFLGCALNPD--RMVPEGFIEPWVMEGLIDG-KSIKYVINQGHDILDS 172
           SY++L D  VK+ FL C+L P+   + P+  IE W+ EG +D    I+   NQG +I++ 
Sbjct: 394 SYDSLPDEAVKSCFLYCSLFPEDYEISPQHLIELWLGEGFLDEYDGIREARNQGEEIIER 453

Query: 173 LQQSGMLEYGSDLALEYVKMHDLTRDMAL 259
           L+   +LE G     EY+KMHD+ RDMAL
Sbjct: 454 LKDVCLLENGRSQKQEYLKMHDVIRDMAL 482


>ref|XP_002281180.1| PREDICTED: disease resistance protein RPS5-like [Vitis vinifera]
          Length = 1026

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   SYNNLRDTIVKNGFLGCALNPDR--MVPEGFIEPWVMEGLIDGKSIKYVINQGHDILDSL 175
           SY++LRD I ++ F+ C++ P    +  +  IE W+ EG  DGK I     +GH I++ L
Sbjct: 391 SYDSLRDEITRSCFIYCSVFPKEYEIRSDELIEHWIGEGFFDGKDIYEARRRGHKIIEDL 450

Query: 176 QQSGMLEYGSDLALEYVKMHDLTRDMALQI 265
           + + +LE G D   E +KMHD+ RDMAL I
Sbjct: 451 KNACLLEEG-DGFKESIKMHDVIRDMALWI 479


>gb|ACP30566.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 648

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
 Frame = +2

Query: 2   SYNNLRDTIVKNGFLGCALNPDRMV--PEGFIEPWVMEGLIDG-KSIKYVINQGHDILDS 172
           SY+NL    VK+ FL C+L P+  +   E  I+ W+ EG IDG +S +  +NQG++IL +
Sbjct: 404 SYDNLEGENVKSCFLYCSLFPEDALIDKERVIDYWICEGFIDGVESKERAVNQGYEILGT 463

Query: 173 LQQSGMLEYGSDLALE-YVKMHDLTRDMALQI 265
           L  + +L+ G     + YV+MHD+ R+MAL I
Sbjct: 464 LVCASLLQEGGKYDNKSYVRMHDVVREMALWI 495


>gb|ACP30558.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 940

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
 Frame = +2

Query: 2   SYNNLRDTIVKNGFLGCALNPDRMV--PEGFIEPWVMEGLIDG-KSIKYVINQGHDILDS 172
           SY+NL    VK+ FL C+L P+  +   E  I+ W+ EG IDG +S +  +NQG++IL +
Sbjct: 454 SYDNLEGENVKSCFLYCSLFPEDALIDKERVIDYWICEGFIDGVESKERAVNQGYEILGT 513

Query: 173 LQQSGMLEYGSDLALE-YVKMHDLTRDMALQI 265
           L  + +L+ G     + YV+MHD+ R+MAL I
Sbjct: 514 LVCASLLQEGGKYDNKSYVRMHDVVREMALWI 545


>ref|XP_002281245.2| PREDICTED: disease resistance protein RFL1-like [Vitis vinifera]
          Length = 1112

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   SYNNLRDTIVKNGFLGCALNPD--RMVPEGFIEPWVMEGLIDGKSIKYVINQGHDILDSL 175
           SY++L D I K+ F+ C++ P    +  +  IE W+ EG  D K I     +GH I++ L
Sbjct: 600 SYDSLTDDITKSCFIYCSVFPKGYEIRNDELIEHWIGEGFFDRKDIYEACRRGHKIIEDL 659

Query: 176 QQSGMLEYGSDLALEYVKMHDLTRDMALQI 265
           + + +LE G D   E +KMHD+ +DMAL I
Sbjct: 660 KNASLLEEG-DGFKECIKMHDVIQDMALWI 688


Top