BLASTX nr result

ID: Cimicifuga21_contig00024738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024738
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18230.3| unnamed protein product [Vitis vinifera]               60   6e-07
ref|XP_002264797.2| PREDICTED: uncharacterized protein LOC100262...    57   5e-06

>emb|CBI18230.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 42/93 (45%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
 Frame = +1

Query: 208 GSFGYMCLFKVANQGDKSDQFVRF--SXXXXXXXXXXXXXXXXXXXXXXXXTMFSGYDQN 381
           G   YMC  KVAN  D S ++VRF  +                        TM+SGY  +
Sbjct: 48  GCVVYMCKLKVANPRD-SGEYVRFRAAGGGNEEVVPPPPQQSEEPVPVVSETMYSGY--S 104

Query: 382 RSSEMSAMVSALTHVVSGERSGTDWGYGFDFGG 480
           R+SEMSAMVSALTHVVSG+R+G D+GY   F G
Sbjct: 105 RASEMSAMVSALTHVVSGQRAG-DYGYASGFVG 136


>ref|XP_002264797.2| PREDICTED: uncharacterized protein LOC100262406 [Vitis vinifera]
           gi|147834261|emb|CAN66025.1| hypothetical protein
           VITISV_028773 [Vitis vinifera]
          Length = 421

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
 Frame = +1

Query: 223 MCLFKVANQGDKSDQFVRF--SXXXXXXXXXXXXXXXXXXXXXXXXTMFSGYDQNRSSEM 396
           MC  KVAN  D S ++VRF  +                        TM+SGY  +R+SEM
Sbjct: 1   MCKLKVANPRD-SGEYVRFRAAGGGNEEVVPPPPQQSEEPVPVVSETMYSGY--SRASEM 57

Query: 397 SAMVSALTHVVSGERSGTDWGYGFDFGG 480
           SAMVSALTHVVSG+R+G D+GY   F G
Sbjct: 58  SAMVSALTHVVSGQRAG-DYGYASGFVG 84


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