BLASTX nr result

ID: Cimicifuga21_contig00024706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024706
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528106.1| mitochondrial inner membrane protease subuni...   231   1e-58
ref|XP_002279805.1| PREDICTED: mitochondrial inner membrane prot...   229   4e-58
ref|XP_004137724.1| PREDICTED: mitochondrial inner membrane prot...   222   7e-56
ref|XP_002323574.1| predicted protein [Populus trichocarpa] gi|2...   217   3e-54
gb|ABK27122.1| unknown [Picea sitchensis]                             213   5e-53

>ref|XP_002528106.1| mitochondrial inner membrane protease subunit, putative [Ricinus
           communis] gi|223532495|gb|EEF34285.1| mitochondrial
           inner membrane protease subunit, putative [Ricinus
           communis]
          Length = 170

 Score =  231 bits (590), Expect = 1e-58
 Identities = 108/166 (65%), Positives = 132/166 (79%), Gaps = 3/166 (1%)
 Frame = +1

Query: 124 SHFLWNVTTKALTLGLVGLTISDRYATCVTVRGLSMLPTFNPTPNPFLG---DDRVLVTK 294
           S+FLW++  K  T+GL+G+TISDRYA+ V VRG+SM PTFNP  + F G   DD VLV K
Sbjct: 4   SNFLWSLAKKYFTVGLIGITISDRYASIVPVRGVSMSPTFNPGTSTFWGSFIDDCVLVEK 63

Query: 295 LCLEKYKFTHGDVIAFRSPNNYKEKLVKRIIALPGDMINVPDSYDTLIVPEGHCWVEGDN 474
            CLEKY+F+HGDV+ FRSP+N+KEK +KRII LPGD I  P +YD + VPEGHCWVEGDN
Sbjct: 64  FCLEKYRFSHGDVVVFRSPSNHKEKHIKRIIGLPGDWIGTPHAYDVVKVPEGHCWVEGDN 123

Query: 475 PSSSLDSRSFGPVPLGLIQGKVSHVIWPPQRVGSVEKKTSKGRLLS 612
             SS+DSR FGPVPLGLI G+V+H++WPPQR+G VEKK  +GRL S
Sbjct: 124 LLSSMDSRYFGPVPLGLISGRVTHIVWPPQRIGEVEKKIPQGRLSS 169


>ref|XP_002279805.1| PREDICTED: mitochondrial inner membrane protease subunit 2 [Vitis
           vinifera] gi|297740215|emb|CBI30397.3| unnamed protein
           product [Vitis vinifera]
          Length = 170

 Score =  229 bits (585), Expect = 4e-58
 Identities = 106/163 (65%), Positives = 127/163 (77%), Gaps = 3/163 (1%)
 Frame = +1

Query: 127 HFLWNVTTKALTLGLVGLTISDRYATCVTVRGLSMLPTFNPTPNPFLG---DDRVLVTKL 297
           +FLW+   K  T GL+GLTISDRYA+   V+GLSM PTFNP    F+G   DD VL+ K 
Sbjct: 5   NFLWDFGKKCFTFGLIGLTISDRYASIAHVQGLSMYPTFNPNARTFMGSLTDDYVLLEKF 64

Query: 298 CLEKYKFTHGDVIAFRSPNNYKEKLVKRIIALPGDMINVPDSYDTLIVPEGHCWVEGDNP 477
           CLEKYKF+HGDVIAFRSPNN++EK +KRIIALPGD I  P SYD L +PEGHCWVEGDN 
Sbjct: 65  CLEKYKFSHGDVIAFRSPNNHREKQIKRIIALPGDWITAPHSYDALRIPEGHCWVEGDNS 124

Query: 478 SSSLDSRSFGPVPLGLIQGKVSHVIWPPQRVGSVEKKTSKGRL 606
           +SSLDSRSFGPVPLGL  G+ +H++WPPQR+G VE++    R+
Sbjct: 125 ASSLDSRSFGPVPLGLACGRATHIVWPPQRIGEVERRIPHDRI 167


>ref|XP_004137724.1| PREDICTED: mitochondrial inner membrane protease subunit 2-like
           [Cucumis sativus] gi|449483475|ref|XP_004156603.1|
           PREDICTED: mitochondrial inner membrane protease subunit
           2-like [Cucumis sativus]
          Length = 184

 Score =  222 bits (566), Expect = 7e-56
 Identities = 102/161 (63%), Positives = 124/161 (77%), Gaps = 3/161 (1%)
 Frame = +1

Query: 127 HFLWNVTTKALTLGLVGLTISDRYATCVTVRGLSMLPTFNPTPNPFLGD---DRVLVTKL 297
           + +WNV  K+ T G++G+TISDRYA+ V +RG SM PTFNP      G    D VLV K 
Sbjct: 5   NLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVLVEKF 64

Query: 298 CLEKYKFTHGDVIAFRSPNNYKEKLVKRIIALPGDMINVPDSYDTLIVPEGHCWVEGDNP 477
           CLEKYKF+ GDVI +RSP NYKEK VKRIIALPGD +    +YD + VPEGHCWVEGDNP
Sbjct: 65  CLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVEGDNP 124

Query: 478 SSSLDSRSFGPVPLGLIQGKVSHVIWPPQRVGSVEKKTSKG 600
             S+DSRSFGP+P+GLIQG+VSH++WPPQR+G+VEKK  +G
Sbjct: 125 ECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG 165


>ref|XP_002323574.1| predicted protein [Populus trichocarpa] gi|222868204|gb|EEF05335.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  217 bits (552), Expect = 3e-54
 Identities = 101/165 (61%), Positives = 131/165 (79%), Gaps = 3/165 (1%)
 Frame = +1

Query: 118 MGS-HFLWNVTTKALTLGLVGLTISDRYATCVTVRGLSMLPTFNPTPNPFLG--DDRVLV 288
           MGS   LWN+T K LT+G++GLTI+DRYA+ V VRG SM PTFNP  N  LG  DDRVL+
Sbjct: 1   MGSGSLLWNLTKKYLTVGVIGLTITDRYASVVPVRGGSMSPTFNPRTNTVLGSLDDRVLI 60

Query: 289 TKLCLEKYKFTHGDVIAFRSPNNYKEKLVKRIIALPGDMINVPDSYDTLIVPEGHCWVEG 468
            K CL KYKF+HGDV+ FRSP+++K+KL+KRII LPGD +  P + D + +PEGHCWVEG
Sbjct: 61  EKFCLAKYKFSHGDVVVFRSPSDHKQKLIKRIIGLPGDWMGTPQN-DVVKIPEGHCWVEG 119

Query: 469 DNPSSSLDSRSFGPVPLGLIQGKVSHVIWPPQRVGSVEKKTSKGR 603
           DNP+SS+DSRSFGP+PLGL+QG+ + ++WPPQR+  VE++  + R
Sbjct: 120 DNPASSMDSRSFGPIPLGLVQGRATTIVWPPQRICQVERRILQDR 164


>gb|ABK27122.1| unknown [Picea sitchensis]
          Length = 170

 Score =  213 bits (541), Expect = 5e-53
 Identities = 105/165 (63%), Positives = 129/165 (78%), Gaps = 3/165 (1%)
 Frame = +1

Query: 130 FLWNVTTKALTLGLVGLTISDRYATCVTVRGLSMLPTFNP-TPNPF--LGDDRVLVTKLC 300
           FLW ++ K+L+  L+GLTISDRYA+ V V+G SM PT NP + N F  L  D VL+ K C
Sbjct: 6   FLWMLSKKSLSGALIGLTISDRYASIVAVQGRSMQPTLNPGSKNRFGSLKGDFVLLEKFC 65

Query: 301 LEKYKFTHGDVIAFRSPNNYKEKLVKRIIALPGDMINVPDSYDTLIVPEGHCWVEGDNPS 480
           L+ YKF+HGDVI FRSP  + E  VKR+IALPGD I+VP +YD L +PEGHCWVEGDN  
Sbjct: 66  LQNYKFSHGDVIVFRSPYEHNEWHVKRLIALPGDWISVPGTYDILKIPEGHCWVEGDNAV 125

Query: 481 SSLDSRSFGPVPLGLIQGKVSHVIWPPQRVGSVEKKTSKGRLLSY 615
           SSLDSRSFGPVPLGL+QG+V+HVIWPP+RVG++EK+  K R+ SY
Sbjct: 126 SSLDSRSFGPVPLGLVQGRVTHVIWPPERVGAIEKQYPKERVSSY 170


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