BLASTX nr result

ID: Cimicifuga21_contig00024636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024636
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 ...    83   3e-14
ref|XP_002517277.1| cyclin B, putative [Ricinus communis] gi|223...    80   2e-13
dbj|BAE72070.1| Cyclin B1-2 [Daucus carota]                            77   1e-12
ref|XP_002273378.1| PREDICTED: G2/mitotic-specific cyclin-1 [Vit...    75   7e-12
emb|CAN73346.1| hypothetical protein VITISV_037918 [Vitis vinifera]    75   7e-12

>ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 [Vitis vinifera]
           gi|297741679|emb|CBI32811.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 47/70 (67%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
 Frame = +3

Query: 27  MASRPVVQQ--QGRGEAVAGGGNKPRVVKAGGNNRRALGDIGNLVTVRPEGGKPLTQIDR 200
           MASRP+V Q  Q RGEA+AG G + +   A G NRRALGDIGNLVTVR   GKP  QI R
Sbjct: 1   MASRPIVPQHHQPRGEALAGDGKQRKNGAAEGRNRRALGDIGNLVTVRGVDGKPQPQISR 60

Query: 201 PVTRSFRAQL 230
           PVTRSF AQL
Sbjct: 61  PVTRSFCAQL 70


>ref|XP_002517277.1| cyclin B, putative [Ricinus communis] gi|223543540|gb|EEF45070.1|
           cyclin B, putative [Ricinus communis]
          Length = 455

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 44/69 (63%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = +3

Query: 27  MASRPVVQQQGRGEAVAGGGNKPRVVKAG-GNNRRALGDIGNLVTVRPEGGKPLTQIDRP 203
           MASRP+V QQ RGEAVAGG N  +   AG G NRR LGDIGNL TVR    K   Q+ RP
Sbjct: 1   MASRPIVPQQPRGEAVAGGNNMQQKKNAGDGRNRRPLGDIGNLATVRGIDAKLANQVSRP 60

Query: 204 VTRSFRAQL 230
           +TRSF AQL
Sbjct: 61  MTRSFCAQL 69


>dbj|BAE72070.1| Cyclin B1-2 [Daucus carota]
          Length = 456

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
 Frame = +3

Query: 30  ASRPVVQQQGRGEA--VAGGGNKPRVVKAGGNNRRALGDIGNLVTVRP--EGGKPLTQID 197
           ++RPVVQQ  R EA  VAGGG K + + A G NRRALGDIGNLVT R   +  KPL Q+ 
Sbjct: 3   STRPVVQQNHREEAAPVAGGGGKQKKMAAEGRNRRALGDIGNLVTARGGIDAVKPLPQVS 62

Query: 198 RPVTRSFRAQL 230
           RP+TRSF AQL
Sbjct: 63  RPITRSFCAQL 73


>ref|XP_002273378.1| PREDICTED: G2/mitotic-specific cyclin-1 [Vitis vinifera]
           gi|297736580|emb|CBI25451.3| unnamed protein product
           [Vitis vinifera]
          Length = 462

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/71 (60%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
 Frame = +3

Query: 27  MASRPVV---QQQGRGEAVAGGGNKPRVVKAGGNNRRALGDIGNLVTVRPEGGKPLTQID 197
           MASR VV    QQ RGEAVAG G + ++V A   NR+ALGDIGNLVT+  + GKP  QI 
Sbjct: 1   MASRAVVPRDHQQPRGEAVAGNGKQKKIVAAERRNRQALGDIGNLVTIGVD-GKPQPQIS 59

Query: 198 RPVTRSFRAQL 230
           RP+TR F AQL
Sbjct: 60  RPITRGFCAQL 70


>emb|CAN73346.1| hypothetical protein VITISV_037918 [Vitis vinifera]
          Length = 451

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/71 (60%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
 Frame = +3

Query: 27  MASRPVV---QQQGRGEAVAGGGNKPRVVKAGGNNRRALGDIGNLVTVRPEGGKPLTQID 197
           MASR VV    QQ RGEAVAG G + ++V A   NR+ALGDIGNLVT+  + GKP  QI 
Sbjct: 1   MASRAVVPRDHQQPRGEAVAGNGKQKKIVAAERRNRQALGDIGNLVTIGVD-GKPQPQIS 59

Query: 198 RPVTRSFRAQL 230
           RP+TR F AQL
Sbjct: 60  RPITRGFCAQL 70


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