BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024626
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16226.3| unnamed protein product [Vitis vinifera]              230   1e-58
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   230   1e-58
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s...   225   3e-57
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo...   225   3e-57
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...   225   3e-57

>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  230 bits (587), Expect = 1e-58
 Identities = 110/174 (63%), Positives = 134/174 (77%), Gaps = 8/174 (4%)
 Frame = +2

Query: 53  VQDQLQFTKEPYIEDVGPRKIKSVNFSVFSGTEISKAAECQVWSSSLYDMAKKPVVNGLL 232
           ++D +QFTKEPYIEDVGPRKI+S+ F++FS +EISKAAE QVW    YD  +KP+ NGLL
Sbjct: 1   MKDGIQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLL 60

Query: 233 DSRMGPANKSGTCATCHGSFTSCPGHFGYLNLVLPVYNVGYFSSIINILKSICKSCARTL 412
           D RMGPANK+GTCATC G+F  CPGH GYL L LPVYNVGY S+I++ILK ICKSC+R L
Sbjct: 61  DPRMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVL 120

Query: 413 LLEKDRRDYLKKMRNPRMEALQKNALAKLVVKKCKPI--------CQRCGYVNG 550
           L EK  +DYLKKMR+ +MEAL+K  L K +V+KC  +        C RCGY+NG
Sbjct: 121 LDEKASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNG 174


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
           vinifera]
          Length = 1383

 Score =  230 bits (587), Expect = 1e-58
 Identities = 110/174 (63%), Positives = 134/174 (77%), Gaps = 8/174 (4%)
 Frame = +2

Query: 53  VQDQLQFTKEPYIEDVGPRKIKSVNFSVFSGTEISKAAECQVWSSSLYDMAKKPVVNGLL 232
           ++D +QFTKEPYIEDVGPRKI+S+ F++FS +EISKAAE QVW    YD  +KP+ NGLL
Sbjct: 1   MKDGIQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLL 60

Query: 233 DSRMGPANKSGTCATCHGSFTSCPGHFGYLNLVLPVYNVGYFSSIINILKSICKSCARTL 412
           D RMGPANK+GTCATC G+F  CPGH GYL L LPVYNVGY S+I++ILK ICKSC+R L
Sbjct: 61  DPRMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVL 120

Query: 413 LLEKDRRDYLKKMRNPRMEALQKNALAKLVVKKCKPI--------CQRCGYVNG 550
           L EK  +DYLKKMR+ +MEAL+K  L K +V+KC  +        C RCGY+NG
Sbjct: 121 LDEKASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNG 174


>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Brachypodium distachyon]
          Length = 1392

 Score =  225 bits (574), Expect = 3e-57
 Identities = 106/170 (62%), Positives = 134/170 (78%), Gaps = 1/170 (0%)
 Frame = +2

Query: 44  MAMVQDQLQFTKEPYIEDVGPRKIKSVNFSVFSGTEISKAAECQVWSSSLYDMAKKPVVN 223
           MA  +++L+ TKEP++EDVG R+IKS+ FS+FSG EI ++AE QVW++ +Y    KPV N
Sbjct: 1   MARPEEKLRCTKEPFVEDVGTRRIKSMRFSMFSGKEIRQSAETQVWNNRIYGNDMKPVPN 60

Query: 224 GLLDSRMGPANKSGTCATCHGSFTSCPGHFGYLNLVLPVYNVGYFSSIINILKSICKSCA 403
           GLLD RMG ANK G CATCHGS+  CPGHFGYL LVLPV+NVG+F++I+++LKSICK C+
Sbjct: 61  GLLDPRMGAANKFGECATCHGSYHECPGHFGYLKLVLPVFNVGFFNNILDVLKSICKGCS 120

Query: 404 RTLLLEKDRRDYLKKMRNPRMEALQKNALAKLVVKKCK-PICQRCGYVNG 550
           R LL EKD+R++LKKMRNPR+E L K AL K V  KCK   C  CGY+NG
Sbjct: 121 RILLHEKDQREFLKKMRNPRLEPLHKAALMKKVRDKCKLSRCPSCGYING 170


>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
          Length = 1321

 Score =  225 bits (574), Expect = 3e-57
 Identities = 103/170 (60%), Positives = 135/170 (79%), Gaps = 1/170 (0%)
 Frame = +2

Query: 44  MAMVQDQLQFTKEPYIEDVGPRKIKSVNFSVFSGTEISKAAECQVWSSSLYDMAKKPVVN 223
           MA  +++L+ TKEP+IEDVG R+IKS+ FS+FSG E+ ++AE QVW+S +Y+   KPV N
Sbjct: 1   MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPN 60

Query: 224 GLLDSRMGPANKSGTCATCHGSFTSCPGHFGYLNLVLPVYNVGYFSSIINILKSICKSCA 403
           GLLD+RMG ANK G C+TCHGSF  CPGHFGYL L LPV+NVG+F+ I+++LK ICKSC+
Sbjct: 61  GLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS 120

Query: 404 RTLLLEKDRRDYLKKMRNPRMEALQKNALAKLVVKKCK-PICQRCGYVNG 550
           R LL+EKDR ++LKKMRNP+ + LQK+A+ K V  KCK   C  CG++NG
Sbjct: 121 RVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKLSRCPWCGFING 170


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
           gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
           Japonica Group] gi|38347455|emb|CAD41360.2|
           OSJNBa0076N16.24 [Oryza sativa Japonica Group]
           gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
           Japonica Group] gi|116310339|emb|CAH67354.1|
           OSIGBa0130B08.14 [Oryza sativa Indica Group]
           gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
           Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218195112|gb|EEC77539.1| hypothetical protein
           OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score =  225 bits (574), Expect = 3e-57
 Identities = 103/170 (60%), Positives = 135/170 (79%), Gaps = 1/170 (0%)
 Frame = +2

Query: 44  MAMVQDQLQFTKEPYIEDVGPRKIKSVNFSVFSGTEISKAAECQVWSSSLYDMAKKPVVN 223
           MA  +++L+ TKEP+IEDVG R+IKS+ FS+FSG E+ ++AE QVW+S +Y+   KPV N
Sbjct: 1   MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPN 60

Query: 224 GLLDSRMGPANKSGTCATCHGSFTSCPGHFGYLNLVLPVYNVGYFSSIINILKSICKSCA 403
           GLLD+RMG ANK G C+TCHGSF  CPGHFGYL L LPV+NVG+F+ I+++LK ICKSC+
Sbjct: 61  GLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS 120

Query: 404 RTLLLEKDRRDYLKKMRNPRMEALQKNALAKLVVKKCK-PICQRCGYVNG 550
           R LL+EKDR ++LKKMRNP+ + LQK+A+ K V  KCK   C  CG++NG
Sbjct: 121 RVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKLSRCPWCGFING 170