BLASTX nr result

ID: Cimicifuga21_contig00024564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024564
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum]               212   3e-53
ref|XP_002273273.2| PREDICTED: probable nucleolar protein 5-2-li...   211   5e-53
emb|CBI34244.3| unnamed protein product [Vitis vinifera]              211   5e-53
emb|CAN73717.1| hypothetical protein VITISV_038844 [Vitis vinifera]   211   5e-53
emb|CAK22424.1| matrix attachment region binding protein [Beta v...   208   3e-52

>dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum]
          Length = 555

 Score =  212 bits (539), Expect = 3e-53
 Identities = 105/115 (91%), Positives = 112/115 (97%)
 Frame = -3

Query: 347 FTKFENTSDALSAATLLIDSKPSKGLRKFLRAHCDGETLAVADTKLGNAIKEKLQIECVH 168
           F+KFENTS+ALSAATLLIDSKPSKGLRKFL+AHCDGETL VAD+KLGNAIKEKLQI+CVH
Sbjct: 47  FSKFENTSEALSAATLLIDSKPSKGLRKFLKAHCDGETLGVADSKLGNAIKEKLQIDCVH 106

Query: 167 NNGVMELMRGVRSQLTELISGLGGQDLAPMSLGLSHSLSRYKLKFSPDKVDTMII 3
           NN VMELMRGVRSQLTELI+GLG QDLAPMSLGLSHSLSRYKLKFSPDKVDTMI+
Sbjct: 107 NNAVMELMRGVRSQLTELITGLGSQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIV 161


>ref|XP_002273273.2| PREDICTED: probable nucleolar protein 5-2-like [Vitis vinifera]
          Length = 573

 Score =  211 bits (537), Expect = 5e-53
 Identities = 107/115 (93%), Positives = 111/115 (96%)
 Frame = -3

Query: 347 FTKFENTSDALSAATLLIDSKPSKGLRKFLRAHCDGETLAVADTKLGNAIKEKLQIECVH 168
           F+KFENT++ALSAATLLIDSKPSKGLRKFLR HCDGETLAVAD+KLGNAIKEKLQIECVH
Sbjct: 47  FSKFENTTEALSAATLLIDSKPSKGLRKFLRVHCDGETLAVADSKLGNAIKEKLQIECVH 106

Query: 167 NNGVMELMRGVRSQLTELISGLGGQDLAPMSLGLSHSLSRYKLKFSPDKVDTMII 3
           NN VMELMRGVRSQLTELISGL  QDLAPMSLGLSHSLSRYKLKFSPDKVDTMII
Sbjct: 107 NNAVMELMRGVRSQLTELISGLAVQDLAPMSLGLSHSLSRYKLKFSPDKVDTMII 161


>emb|CBI34244.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  211 bits (537), Expect = 5e-53
 Identities = 107/115 (93%), Positives = 111/115 (96%)
 Frame = -3

Query: 347 FTKFENTSDALSAATLLIDSKPSKGLRKFLRAHCDGETLAVADTKLGNAIKEKLQIECVH 168
           F+KFENT++ALSAATLLIDSKPSKGLRKFLR HCDGETLAVAD+KLGNAIKEKLQIECVH
Sbjct: 47  FSKFENTTEALSAATLLIDSKPSKGLRKFLRVHCDGETLAVADSKLGNAIKEKLQIECVH 106

Query: 167 NNGVMELMRGVRSQLTELISGLGGQDLAPMSLGLSHSLSRYKLKFSPDKVDTMII 3
           NN VMELMRGVRSQLTELISGL  QDLAPMSLGLSHSLSRYKLKFSPDKVDTMII
Sbjct: 107 NNAVMELMRGVRSQLTELISGLAVQDLAPMSLGLSHSLSRYKLKFSPDKVDTMII 161


>emb|CAN73717.1| hypothetical protein VITISV_038844 [Vitis vinifera]
          Length = 472

 Score =  211 bits (537), Expect = 5e-53
 Identities = 107/115 (93%), Positives = 111/115 (96%)
 Frame = -3

Query: 347 FTKFENTSDALSAATLLIDSKPSKGLRKFLRAHCDGETLAVADTKLGNAIKEKLQIECVH 168
           F+KFENT++ALSAATLLIDSKPSKGLRKFLR HCDGETLAVAD+KLGNAIKEKLQIECVH
Sbjct: 47  FSKFENTTEALSAATLLIDSKPSKGLRKFLRVHCDGETLAVADSKLGNAIKEKLQIECVH 106

Query: 167 NNGVMELMRGVRSQLTELISGLGGQDLAPMSLGLSHSLSRYKLKFSPDKVDTMII 3
           NN VMELMRGVRSQLTELISGL  QDLAPMSLGLSHSLSRYKLKFSPDKVDTMII
Sbjct: 107 NNAVMELMRGVRSQLTELISGLAVQDLAPMSLGLSHSLSRYKLKFSPDKVDTMII 161


>emb|CAK22424.1| matrix attachment region binding protein [Beta vulgaris]
          Length = 572

 Score =  208 bits (530), Expect = 3e-52
 Identities = 105/115 (91%), Positives = 111/115 (96%)
 Frame = -3

Query: 347 FTKFENTSDALSAATLLIDSKPSKGLRKFLRAHCDGETLAVADTKLGNAIKEKLQIECVH 168
           F KFENT++ALSAATLLIDSKPSKGLRKFL+AHC GETLAVAD+KLGNAIKEKLQIECVH
Sbjct: 47  FDKFENTAEALSAATLLIDSKPSKGLRKFLKAHCKGETLAVADSKLGNAIKEKLQIECVH 106

Query: 167 NNGVMELMRGVRSQLTELISGLGGQDLAPMSLGLSHSLSRYKLKFSPDKVDTMII 3
           NN VMELMRGVRSQL+ELISGLG QDLAPMSLGLSHSLSRYKLKFSP+KVDTMII
Sbjct: 107 NNSVMELMRGVRSQLSELISGLGAQDLAPMSLGLSHSLSRYKLKFSPEKVDTMII 161


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