BLASTX nr result

ID: Cimicifuga21_contig00024559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024559
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19366.3| unnamed protein product [Vitis vinifera]              111   2e-22
ref|XP_002310885.1| predicted protein [Populus trichocarpa] gi|2...   102   6e-20
ref|XP_002320018.1| predicted protein [Populus trichocarpa] gi|2...    97   3e-18
ref|XP_002510054.1| conserved hypothetical protein [Ricinus comm...    84   3e-14
ref|XP_003550296.1| PREDICTED: uncharacterized protein LOC100791...    76   6e-12

>emb|CBI19366.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score =  111 bits (277), Expect = 2e-22
 Identities = 64/151 (42%), Positives = 80/151 (52%), Gaps = 4/151 (2%)
 Frame = +1

Query: 136 MNHSKVHSQANIPFSWENQPGVSKVKH-PSDVGTDT---LIKLPPPPCQSDTSHKVLGHD 303
           MN SK+HSQ N+PF+WEN+PGV K +    D  TDT   +IKL PPPC  +     + H 
Sbjct: 1   MNQSKIHSQGNVPFAWENKPGVCKARRDDEDCPTDTGHFVIKLQPPPCPLEKGRPSV-HG 59

Query: 304 MQVXXXXXXXXXXXXRNSSRKGLRRHEDDPFLAAYKECTKSEXXXXXXXXXXXXXXXXXX 483
            Q+            RNSS+KG  R ++DPFLAAYKECTK+                   
Sbjct: 60  SQIPLPPCTFQGPPSRNSSKKGHLRKQEDPFLAAYKECTKNTRKGHDGKTHLGRSSMFN- 118

Query: 484 XXXXLFSCKHSCGVREDSLVKLSHISTSVPR 576
                 SCKHSC VR+D+LV  S +S  V R
Sbjct: 119 -----LSCKHSCNVRDDNLVSKSRLSALVSR 144


>ref|XP_002310885.1| predicted protein [Populus trichocarpa] gi|222853788|gb|EEE91335.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  102 bits (255), Expect = 6e-20
 Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 11/161 (6%)
 Frame = +1

Query: 136 MNHSKVHSQANIPFSWENQPGVSKVKHPS---DVGTDTL-IKLPPPPC----QSDTSHKV 291
           M+H KV+SQ +IPFSWE+ PGVSKV H     D+G + + I  P  P      SDTS+KV
Sbjct: 1   MSHRKVYSQGSIPFSWEDSPGVSKVIHKEYTIDIGLNAVNISSPTSPILFPRDSDTSYKV 60

Query: 292 LG-HDMQV--XXXXXXXXXXXXRNSSRKGLRRHEDDPFLAAYKECTKSEXXXXXXXXXXX 462
           LG H +++              R+ S KG R  ++DPFLAAYKECTK+            
Sbjct: 61  LGSHGIKIPLPPCVSAKIEPPRRSKSVKGFRWWQEDPFLAAYKECTKNGRNGKLSSESKK 120

Query: 463 XXXXXXXXXXXLFSCKHSCGVREDSLVKLSHISTSVPRERV 585
                      +FSCK SC V++D+LV L+++  ++PR+RV
Sbjct: 121 NVRSKLRKSRLIFSCKDSCDVQDDNLVMLANL-PAIPRDRV 160


>ref|XP_002320018.1| predicted protein [Populus trichocarpa] gi|222860791|gb|EEE98333.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 61/154 (39%), Positives = 85/154 (55%), Gaps = 5/154 (3%)
 Frame = +1

Query: 136 MNHSKVHSQANIPFSWENQPGVSKV-KHPSDVGTDT-LIKLPPPPCQSDTSHKVLGHD-- 303
           M  SK+HS+ N+PFSWE +PG SKV  H   +  +T ++KL PPPC  ++S ++  HD  
Sbjct: 1   MKQSKIHSKGNVPFSWEKKPGESKVTSHHDYLSRETSVVKLQPPPCPVESS-RISTHDII 59

Query: 304 MQVXXXXXXXXXXXXRNSSRKGLRRH-EDDPFLAAYKECTKSEXXXXXXXXXXXXXXXXX 480
           + +            R+SSR+GL++  +DDPFLAAYKECTK +                 
Sbjct: 60  IPLPPCTFQAPGAPLRSSSRRGLKKDIDDDPFLAAYKECTKKD----KPVGKDFGSGRRK 115

Query: 481 XXXXXLFSCKHSCGVREDSLVKLSHISTSVPRER 582
                  SCK SC VR+D+LV++S     VP ER
Sbjct: 116 RAIFDFSSCKQSCSVRDDNLVRVS----QVPYER 145


>ref|XP_002510054.1| conserved hypothetical protein [Ricinus communis]
           gi|223550755|gb|EEF52241.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
 Frame = +1

Query: 136 MNHSKVHSQANIPFSWENQPGVSK-VKHPSDVG--TDTLIKLPPPPCQSDTSHKVLGHDM 306
           M+ SK +++ N+PFSWE +PGVSK +   SD     D ++KL PPPC  + S ++  HD 
Sbjct: 1   MDQSKANTKGNVPFSWEKKPGVSKLINQDSDPNQEEDLVLKLLPPPCPIE-SPRISTHDT 59

Query: 307 QVXXXXXXXXXXXXRNSSRKGLRRHEDDPFLAAYKECTKS 426
                         R+SSRKG+R+ +DDPFLAAYKECTKS
Sbjct: 60  INIPLPPCTFQPPSRSSSRKGIRK-QDDPFLAAYKECTKS 98


>ref|XP_003550296.1| PREDICTED: uncharacterized protein LOC100791035 [Glycine max]
          Length = 157

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 51/146 (34%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
 Frame = +1

Query: 169 IPFSWENQPGVSKVK---HPSDV---GTDTLIKLPPPPC---QSDTSHKVLGH----DMQ 309
           I FSWE +PGVSKV    H  ++     + L KLPPPPC   +S  +H    H    D Q
Sbjct: 8   ISFSWEKKPGVSKVTTTTHGENLIPKEEEFLAKLPPPPCTPEESSATHHHKNHHPLLDFQ 67

Query: 310 VXXXXXXXXXXXXRNSSRKGLRRHEDDPFLAAYKECTKSE---XXXXXXXXXXXXXXXXX 480
           +            R SS++GL   + DPFLAA+KECTK+                     
Sbjct: 68  IPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKNHQKTSAKVNKKLIKDGIEARV 127

Query: 481 XXXXXLFSCKHSCGVREDSLVKLSHI 558
                 FSC  SC V + +LV++SH+
Sbjct: 128 RKSMSFFSCTRSCTVHDTNLVRISHL 153


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