BLASTX nr result

ID: Cimicifuga21_contig00024509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024509
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001042761.1| Os01g0282800 [Oryza sativa Japonica Group] g...   116   2e-46
gb|AFW79504.1| hypothetical protein ZEAMMB73_908177, partial [Ze...   116   2e-46
ref|XP_003568202.1| PREDICTED: tubulin beta-5 chain-like [Brachy...   116   2e-46
ref|XP_002283056.1| PREDICTED: tubulin beta-1 chain [Vitis vinif...   116   2e-46
sp|Q9ZRA8.1|TBB5_WHEAT RecName: Full=Tubulin beta-5 chain; AltNa...   116   2e-46

>ref|NP_001042761.1| Os01g0282800 [Oryza sativa Japonica Group]
           gi|74053560|sp|Q43594.2|TBB1_ORYSJ RecName: Full=Tubulin
           beta-1 chain; AltName: Full=Beta-1-tubulin
           gi|13486716|dbj|BAB39951.1| putative tubulin beta-4
           chain [Oryza sativa Japonica Group]
           gi|15408819|dbj|BAB64211.1| putative beta-tubulin 4
           [Oryza sativa Japonica Group]
           gi|113532292|dbj|BAF04675.1| Os01g0282800 [Oryza sativa
           Japonica Group] gi|125525429|gb|EAY73543.1| hypothetical
           protein OsI_01426 [Oryza sativa Indica Group]
           gi|215768577|dbj|BAH00806.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 447

 Score =  116 bits (291), Expect(2) = 2e-46
 Identities = 55/55 (100%), Positives = 55/55 (100%)
 Frame = +3

Query: 3   IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI 167
           IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI
Sbjct: 30  IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI 84



 Score = 94.7 bits (234), Expect(2) = 2e-46
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = +2

Query: 257 VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 385
           VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF
Sbjct: 91  VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133


>gb|AFW79504.1| hypothetical protein ZEAMMB73_908177, partial [Zea mays]
          Length = 447

 Score =  116 bits (291), Expect(2) = 2e-46
 Identities = 55/55 (100%), Positives = 55/55 (100%)
 Frame = +3

Query: 3   IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI 167
           IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI
Sbjct: 30  IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI 84



 Score = 94.7 bits (234), Expect(2) = 2e-46
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = +2

Query: 257 VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 385
           VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF
Sbjct: 91  VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133


>ref|XP_003568202.1| PREDICTED: tubulin beta-5 chain-like [Brachypodium distachyon]
          Length = 447

 Score =  116 bits (291), Expect(2) = 2e-46
 Identities = 55/55 (100%), Positives = 55/55 (100%)
 Frame = +3

Query: 3   IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI 167
           IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI
Sbjct: 30  IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI 84



 Score = 94.7 bits (234), Expect(2) = 2e-46
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = +2

Query: 257 VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 385
           VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF
Sbjct: 91  VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133


>ref|XP_002283056.1| PREDICTED: tubulin beta-1 chain [Vitis vinifera]
           gi|147819028|emb|CAN64894.1| hypothetical protein
           VITISV_029111 [Vitis vinifera]
          Length = 447

 Score =  116 bits (291), Expect(2) = 2e-46
 Identities = 55/55 (100%), Positives = 55/55 (100%)
 Frame = +3

Query: 3   IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI 167
           IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI
Sbjct: 30  IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI 84



 Score = 94.7 bits (234), Expect(2) = 2e-46
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = +2

Query: 257 VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 385
           VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF
Sbjct: 91  VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133


>sp|Q9ZRA8.1|TBB5_WHEAT RecName: Full=Tubulin beta-5 chain; AltName: Full=Beta-5-tubulin
           gi|4098331|gb|AAD10492.1| beta-tubulin 5 [Triticum
           aestivum] gi|146760213|emb|CAM58982.1| beta tubulin 4
           [Hordeum vulgare subsp. vulgare]
          Length = 447

 Score =  116 bits (291), Expect(2) = 2e-46
 Identities = 55/55 (100%), Positives = 55/55 (100%)
 Frame = +3

Query: 3   IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI 167
           IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI
Sbjct: 30  IDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI 84



 Score = 94.7 bits (234), Expect(2) = 2e-46
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = +2

Query: 257 VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 385
           VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF
Sbjct: 91  VFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133


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