BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024502
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27249.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17
ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containi...    68   9e-10
ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp....    63   2e-08
ref|NP_178437.1| pentatricopeptide repeat-containing protein [Ar...    62   4e-08

>emb|CBI27249.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/83 (54%), Positives = 62/83 (74%)
 Frame = +1

Query: 136 RNFTQPTFQQPLETDTTVALASIHSLSSNPMLTLLGLCNNLNSLKTTHSLLLVHGMTNDL 315
           RN T    Q+  E D T+A  SI S+SSNP  +LLG+C  ++SL+  H+LL+VHG++ DL
Sbjct: 61  RNLTVTALQRTPEIDRTIA--SIQSISSNPCFSLLGICKTVSSLRKIHALLVVHGLSEDL 118

Query: 316 LCQTKLVSLYGSFGYIKWARSIF 384
           LC+TKLVSLYGSFG+++ AR +F
Sbjct: 119 LCETKLVSLYGSFGHVECARLMF 141


>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
           gi|147818711|emb|CAN65040.1| hypothetical protein
           VITISV_009460 [Vitis vinifera]
          Length = 700

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/83 (54%), Positives = 62/83 (74%)
 Frame = +1

Query: 136 RNFTQPTFQQPLETDTTVALASIHSLSSNPMLTLLGLCNNLNSLKTTHSLLLVHGMTNDL 315
           RN T    Q+  E D T+A  SI S+SSNP  +LLG+C  ++SL+  H+LL+VHG++ DL
Sbjct: 14  RNLTVTALQRTPEIDRTIA--SIQSISSNPCFSLLGICKTVSSLRKIHALLVVHGLSEDL 71

Query: 316 LCQTKLVSLYGSFGYIKWARSIF 384
           LC+TKLVSLYGSFG+++ AR +F
Sbjct: 72  LCETKLVSLYGSFGHVECARLMF 94


>ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Glycine max]
          Length = 699

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/56 (58%), Positives = 39/56 (69%)
 Frame = +1

Query: 217 SNPMLTLLGLCNNLNSLKTTHSLLLVHGMTNDLLCQTKLVSLYGSFGYIKWARSIF 384
           S P   L  LC NL SLKT H+  L+HG+TNDLL  TKL+SLY SFG ++ AR IF
Sbjct: 33  SPPTFYLSRLCTNLPSLKTLHASFLIHGLTNDLLLSTKLLSLYASFGQLRHARKIF 88


>ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297814638|ref|XP_002875202.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297321039|gb|EFH51460.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297321040|gb|EFH51461.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
 Frame = +1

Query: 124 IFHRRNFTQPTFQQ---PLETDTTVALASIHSLSSNPMLTLLGLCNNLNSLKTTHSLLLV 294
           +   R FT  T Q+   P + D +    S++  +S P   LL  C N++SL+  H +L  
Sbjct: 26  VMRMRCFTFTTIQELNLPEDNDES----SLNYAASRPCFLLLSKCTNIDSLRQAHGVLTG 81

Query: 295 HGMTNDLLCQTKLVSLYGSFGYIKWARSIF 384
           +G+  D+   TKLVSLYGSFGY K AR +F
Sbjct: 82  NGLMGDISIATKLVSLYGSFGYTKDARLVF 111


>ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
           gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis
           thaliana] gi|330250600|gb|AEC05694.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = +1

Query: 196 ASIHSLSSNPMLTLLGLCNNLNSLKTTHSLLLVHGMTNDLLCQTKLVSLYGSFGYIKWAR 375
           +S+H  +S+P   LL  C N++SL+ +H +L  +G+  D+   TKLVSLYG FGY K AR
Sbjct: 37  SSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDAR 96

Query: 376 SIF 384
            +F
Sbjct: 97  LVF 99