BLASTX nr result

ID: Cimicifuga21_contig00024421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024421
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517422.1| conserved hypothetical protein [Ricinus comm...   114   1e-23
ref|XP_003543838.1| PREDICTED: paired amphipathic helix protein ...   109   2e-22
ref|XP_003554862.1| PREDICTED: paired amphipathic helix protein ...   109   3e-22
ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein ...   107   8e-22
emb|CBI32068.3| unnamed protein product [Vitis vinifera]              107   8e-22

>ref|XP_002517422.1| conserved hypothetical protein [Ricinus communis]
           gi|223543433|gb|EEF44964.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1289

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/109 (55%), Positives = 77/109 (70%), Gaps = 5/109 (4%)
 Frame = -1

Query: 312 QVLNDTCTSITSGG-GYCLK---RSKYEERLFRCEDDMYEMDMLFESLKGAIGCAEQLLP 145
           QVLND   S+TSG   Y  K   R++YEE LFRCEDD +E+DML ES+      AE+LL 
Sbjct: 434 QVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVTSTAKRAEELLN 493

Query: 144 KINDN-LPTPIRLEDHFTAPYLRCIKRVYGDRGPDVLRQLRENPTIALP 1
            IN+N +  PI ++DHFTA  LRCI+R+YGD G DV+  LR+NPT+ALP
Sbjct: 494 SINENKIEAPINIDDHFTALNLRCIERLYGDHGLDVMDILRKNPTLALP 542


>ref|XP_003543838.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like
           [Glycine max]
          Length = 1371

 Score =  109 bits (273), Expect = 2e-22
 Identities = 62/111 (55%), Positives = 75/111 (67%), Gaps = 7/111 (6%)
 Frame = -1

Query: 312 QVLNDTCTSITSGG-GYCLK---RSKYEERLFRCEDDMYEMDMLFESLKGAIGCAEQLLP 145
           QVLND   S+TSG   Y  K   R++YEE LFRCEDD YE+DML ES+  A   AE+L  
Sbjct: 484 QVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRYELDMLLESVSSAAKKAEELYN 543

Query: 144 KINDN---LPTPIRLEDHFTAPYLRCIKRVYGDRGPDVLRQLRENPTIALP 1
            IN+N   + T  R+EDHFT   LRCI+R+YGD G DV+  LR+NPT ALP
Sbjct: 544 NINENKIGMETLNRIEDHFTVLNLRCIERLYGDHGLDVIDILRKNPTHALP 594


>ref|XP_003554862.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like
           [Glycine max]
          Length = 1383

 Score =  109 bits (272), Expect = 3e-22
 Identities = 62/111 (55%), Positives = 75/111 (67%), Gaps = 7/111 (6%)
 Frame = -1

Query: 312 QVLNDTCTSITSGG-GYCLK---RSKYEERLFRCEDDMYEMDMLFESLKGAIGCAEQLLP 145
           QVLND   S+TSG   Y  K   R++YEE LFRCEDD YE+DML ES+  A   AE+L  
Sbjct: 490 QVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRYELDMLLESVSSAAKKAEELYN 549

Query: 144 KINDN---LPTPIRLEDHFTAPYLRCIKRVYGDRGPDVLRQLRENPTIALP 1
            IN+N   + T  R+EDHFT   LRCI+R+YGD G DV+  LR+NPT ALP
Sbjct: 550 SINENKISVETLNRIEDHFTVLNLRCIERLYGDHGLDVIDILRKNPTHALP 600


>ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis
           vinifera]
          Length = 1421

 Score =  107 bits (268), Expect = 8e-22
 Identities = 59/111 (53%), Positives = 77/111 (69%), Gaps = 7/111 (6%)
 Frame = -1

Query: 312 QVLNDTCTSITSGG-GYCLK---RSKYEERLFRCEDDMYEMDMLFESLKGAIGCAEQLLP 145
           +VLND   S+TSG   Y  K   +++YEE LFRCEDD +E+DML ES+       E+LL 
Sbjct: 507 EVLNDYWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLD 566

Query: 144 KINDNL---PTPIRLEDHFTAPYLRCIKRVYGDRGPDVLRQLRENPTIALP 1
           KIN+N     +PIR+ED+FTA  LRCI+R+YGD G DV+  LR+N T+ALP
Sbjct: 567 KINNNTIKTDSPIRIEDYFTALNLRCIERLYGDHGLDVMDVLRKNATLALP 617


>emb|CBI32068.3| unnamed protein product [Vitis vinifera]
          Length = 1445

 Score =  107 bits (268), Expect = 8e-22
 Identities = 59/111 (53%), Positives = 77/111 (69%), Gaps = 7/111 (6%)
 Frame = -1

Query: 312 QVLNDTCTSITSGG-GYCLK---RSKYEERLFRCEDDMYEMDMLFESLKGAIGCAEQLLP 145
           +VLND   S+TSG   Y  K   +++YEE LFRCEDD +E+DML ES+       E+LL 
Sbjct: 525 EVLNDYWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLD 584

Query: 144 KINDNL---PTPIRLEDHFTAPYLRCIKRVYGDRGPDVLRQLRENPTIALP 1
           KIN+N     +PIR+ED+FTA  LRCI+R+YGD G DV+  LR+N T+ALP
Sbjct: 585 KINNNTIKTDSPIRIEDYFTALNLRCIERLYGDHGLDVMDVLRKNATLALP 635


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