BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024190
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar...   155   2e-36
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ...   155   4e-36
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   150   8e-35
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   149   2e-34

>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g48250, chloroplastic; Flags: Precursor
           gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
           thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  155 bits (393), Expect = 2e-36
 Identities = 76/103 (73%), Positives = 83/103 (80%)
 Frame = +2

Query: 2   YELMMDSPYKPPIANCSSLLHHISLSNTPDLDLVSRVFKKYESTGNTLSKAVYDGVHRSL 181
           YE MMD P+KP I +CS LL ++S S  PDLDLV RV +KYESTG +LSKAVYDG+HRSL
Sbjct: 321 YEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSL 380

Query: 182 TGVGRFDEAENILDTMRNTGYEPDNITYSQLVFGLCKVGRLEE 310
           T VGRFDEAE I   MRN GYEPDNITYSQLVFGLCK  RLEE
Sbjct: 381 TSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEE 423


>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323443|gb|EFH53864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 618

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/103 (72%), Positives = 82/103 (79%)
 Frame = +2

Query: 2   YELMMDSPYKPPIANCSSLLHHISLSNTPDLDLVSRVFKKYESTGNTLSKAVYDGVHRSL 181
           YE MMD P+KP I +CS LL ++S    PDLDLV RV +KYESTG +LSKAVYDG+HRSL
Sbjct: 318 YEYMMDGPFKPSIQDCSLLLRYLSARPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSL 377

Query: 182 TGVGRFDEAENILDTMRNTGYEPDNITYSQLVFGLCKVGRLEE 310
           T VGRFDEAE I   MRN GYEPDNITYSQLVFGLCK  RLEE
Sbjct: 378 TSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEE 420


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/103 (68%), Positives = 85/103 (82%)
 Frame = +2

Query: 2   YELMMDSPYKPPIANCSSLLHHISLSNTPDLDLVSRVFKKYESTGNTLSKAVYDGVHRSL 181
           YELMMD PYKP + +CS LL  I+ S+ PDL LV RV KK+E+TG +LSKA+YDG+HRSL
Sbjct: 316 YELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRSL 375

Query: 182 TGVGRFDEAENILDTMRNTGYEPDNITYSQLVFGLCKVGRLEE 310
           T  G+FD+AENI+ +MRN GYEPDN+TYSQLVFGLCK  RLEE
Sbjct: 376 TSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEE 418


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  150 bits (380), Expect = 8e-35
 Identities = 72/103 (69%), Positives = 84/103 (81%)
 Frame = +2

Query: 2   YELMMDSPYKPPIANCSSLLHHISLSNTPDLDLVSRVFKKYESTGNTLSKAVYDGVHRSL 181
           YELMMD   KP + +C+ LL  IS ++ P+LDLV RV KKYESTG+TLSKA+YDG+HRSL
Sbjct: 322 YELMMDGSCKPLVQDCNMLLKSISANDKPNLDLVFRVAKKYESTGHTLSKAIYDGIHRSL 381

Query: 182 TGVGRFDEAENILDTMRNTGYEPDNITYSQLVFGLCKVGRLEE 310
           T  G FDEAENI+ TMRN GYEPDNITYSQ+VFGLCK+ R EE
Sbjct: 382 TSAGNFDEAENIVRTMRNAGYEPDNITYSQMVFGLCKMRRFEE 424


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/103 (67%), Positives = 81/103 (78%)
 Frame = +2

Query: 2   YELMMDSPYKPPIANCSSLLHHISLSNTPDLDLVSRVFKKYESTGNTLSKAVYDGVHRSL 181
           YE MMD P+KP + +CS LL  IS SN PDL+LV RV  KYE+TGN+LSKAVYDG+HRSL
Sbjct: 321 YEFMMDGPFKPSVQDCSMLLRSISASNYPDLNLVFRVVNKYEATGNSLSKAVYDGIHRSL 380

Query: 182 TGVGRFDEAENILDTMRNTGYEPDNITYSQLVFGLCKVGRLEE 310
           T +G FDEA  ++  M+  GYEPDNITYSQLVFGLCK  RLEE
Sbjct: 381 TSIGNFDEAAKMMKCMQTAGYEPDNITYSQLVFGLCKARRLEE 423