BLASTX nr result

ID: Cimicifuga21_contig00023482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023482
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40350.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002273844.1| PREDICTED: UPF0187 protein At3g61320, chloro...   139   2e-31
ref|XP_002511848.1| conserved hypothetical protein [Ricinus comm...   137   1e-30
ref|XP_002320128.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|NP_182111.1| Bestrophin-like protein [Arabidopsis thaliana] ...   122   4e-26

>emb|CBI40350.3| unnamed protein product [Vitis vinifera]
          Length = 339

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/78 (84%), Positives = 76/78 (97%)
 Frame = +3

Query: 3   YQLTAPALALLLVFRTEASYSRFEEGRKAWTKLVAGTSDFARQVMASVDNSSDAMIRKAL 182
           YQLTAPALALLLVFRTEASYSRFEEGRKAWTK++AGT+DFARQV+A V++S DA+++KAL
Sbjct: 78  YQLTAPALALLLVFRTEASYSRFEEGRKAWTKIIAGTNDFARQVVAGVESSGDALLKKAL 137

Query: 183 LQYIVAFPVALKCHVIYG 236
           LQYI+AFPVALKCHVIYG
Sbjct: 138 LQYIMAFPVALKCHVIYG 155


>ref|XP_002273844.1| PREDICTED: UPF0187 protein At3g61320, chloroplastic [Vitis
           vinifera]
          Length = 419

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/78 (84%), Positives = 76/78 (97%)
 Frame = +3

Query: 3   YQLTAPALALLLVFRTEASYSRFEEGRKAWTKLVAGTSDFARQVMASVDNSSDAMIRKAL 182
           YQLTAPALALLLVFRTEASYSRFEEGRKAWTK++AGT+DFARQV+A V++S DA+++KAL
Sbjct: 158 YQLTAPALALLLVFRTEASYSRFEEGRKAWTKIIAGTNDFARQVVAGVESSGDALLKKAL 217

Query: 183 LQYIVAFPVALKCHVIYG 236
           LQYI+AFPVALKCHVIYG
Sbjct: 218 LQYIMAFPVALKCHVIYG 235


>ref|XP_002511848.1| conserved hypothetical protein [Ricinus communis]
           gi|223549028|gb|EEF50517.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 417

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/78 (80%), Positives = 75/78 (96%)
 Frame = +3

Query: 3   YQLTAPALALLLVFRTEASYSRFEEGRKAWTKLVAGTSDFARQVMASVDNSSDAMIRKAL 182
           YQLTAPALALLLVFRTEASYSR+EEGRKAWTK+++G +DFARQV+A+VDNS DA+++ AL
Sbjct: 163 YQLTAPALALLLVFRTEASYSRYEEGRKAWTKVISGVNDFARQVIATVDNSKDAVLKNAL 222

Query: 183 LQYIVAFPVALKCHVIYG 236
           LQY++AFPVALKCHVIYG
Sbjct: 223 LQYVIAFPVALKCHVIYG 240


>ref|XP_002320128.1| predicted protein [Populus trichocarpa] gi|222860901|gb|EEE98443.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/78 (71%), Positives = 71/78 (91%)
 Frame = +3

Query: 3   YQLTAPALALLLVFRTEASYSRFEEGRKAWTKLVAGTSDFARQVMASVDNSSDAMIRKAL 182
           YQLTAPALALLLVFRTEASYSRFE+G+ AWTK+++GT+DFARQV++ VD SS++ ++  L
Sbjct: 97  YQLTAPALALLLVFRTEASYSRFEDGKTAWTKVISGTNDFARQVISGVDGSSNSALKSEL 156

Query: 183 LQYIVAFPVALKCHVIYG 236
           L+YI+AFP+ALKCHV YG
Sbjct: 157 LRYIMAFPIALKCHVTYG 174


>ref|NP_182111.1| Bestrophin-like protein [Arabidopsis thaliana]
           gi|20140947|sp|O80832.1|YU87_ARATH RecName: Full=UPF0187
           protein At2g45870, chloroplastic; Flags: Precursor
           gi|3386607|gb|AAC28537.1| hypothetical protein
           [Arabidopsis thaliana] gi|18491251|gb|AAL69450.1|
           At2g45870/F4I18.15 [Arabidopsis thaliana]
           gi|330255518|gb|AEC10612.1| Bestrophin-like protein
           [Arabidopsis thaliana]
          Length = 410

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/79 (77%), Positives = 70/79 (88%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   YQLTAPALALLLVFRTEASYSRFEEGRKAWTKLVAGTSDFARQVMASVDNSSDAM-IRKA 179
           YQLTAPALALLLVFRTEASYSRFE+GRKAW K+++GT+D AR V++SV  S D + IR A
Sbjct: 155 YQLTAPALALLLVFRTEASYSRFEQGRKAWVKIISGTNDLARLVISSVHGSGDELIIRDA 214

Query: 180 LLQYIVAFPVALKCHVIYG 236
           LL+YIVAFPVALKCHVIYG
Sbjct: 215 LLRYIVAFPVALKCHVIYG 233


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