BLASTX nr result

ID: Cimicifuga21_contig00023480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023480
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX85638.1| putative transposase [Cucumis melo]                    112   1e-22
emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]   101   3e-19
ref|XP_002319289.1| predicted protein [Populus trichocarpa] gi|2...    96   1e-17
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...    94   8e-17
ref|XP_002336966.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-14

>gb|ACX85638.1| putative transposase [Cucumis melo]
          Length = 680

 Score =  112 bits (281), Expect = 1e-22
 Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 15/179 (8%)
 Frame = +1

Query: 1   SSRPPQSGKRKSI-----AWDHFYIIEGSNPK--RAQFKYC----SCEGKTNGTTNMKNY 147
           S   P  GKRK +      W+HF  +EG +PK  RA  K+C    +C+ K NGTTN+K +
Sbjct: 13  SCSSPVLGKRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACDSKRNGTTNLKRH 72

Query: 148 IEKANNSPNYPCKKTNNSQTTLNMKQTKDGNSQLVAVSFKVEACRRALTKMIIVDDFPFR 327
           +EK        CK   N     N++   D  S L+  SF  E CR+ L +M+I+D+ PF+
Sbjct: 73  LEK--------CKMYVNPLED-NVEGEGDSESNLMTASFTQENCRKMLARMVILDELPFK 123

Query: 328 IVEGEGFREFVKVLQPKFVLP----FARDCIKLYFRRK*EVEECLENQTKPNCAQP*YW 492
            VE EGF +F + L PKFV+P     A+DC ++Y + K +++  L    +  C     W
Sbjct: 124 FVESEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDTW 182


>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score =  101 bits (252), Expect = 3e-19
 Identities = 68/173 (39%), Positives = 96/173 (55%), Gaps = 23/173 (13%)
 Frame = +1

Query: 1   SSRPPQ-SGKRK-----SIAWDHFYIIEGSNPK--RAQFKYC----SCEGKTNGTTNMKN 144
           SS PPQ + KRK     S  WDHF  ++  +P   RA   YC    +C  K N T+NMK 
Sbjct: 19  SSLPPQGTSKRKPTKPPSEVWDHFTKVKECDPNYPRATCNYCGIDYACHDKRNETSNMKA 78

Query: 145 YIEKANNSPNYPCKKTNNSQTTLNMK-QTKDGNSQ------LVAVSFKVEACRRALTKMI 303
           ++  A+    +P +  +  Q TL+ + + K+G  +      L+A SF VE CR+ L +MI
Sbjct: 79  HL--ASGCQKHPFRCKDPKQKTLSFQSKNKEGEGEGDSGYTLLATSFNVEHCRKMLARMI 136

Query: 304 IVDDFPFRIVEGEGFREFVKVLQPKFVLP----FARDCIKLYFRRK*EVEECL 450
           IVD+  FR V+GEGFR F   LQPKF +P     A+DC +LY   K +++  L
Sbjct: 137 IVDELAFRFVQGEGFRAFCSPLQPKFFIPSRATVAKDCSQLYSSEKKKLKSVL 189


>ref|XP_002319289.1| predicted protein [Populus trichocarpa] gi|222857665|gb|EEE95212.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 16/161 (9%)
 Frame = +1

Query: 25  KRKSIAWDHFYIIEGS-NPKRAQFKYC----SCEGKTNGTTNMKNYIEKANNSPNYPCKK 189
           K+KS  WDHF  ++G     RA++ YC    +C    NGT+NM ++++     P    KK
Sbjct: 57  KKKSQIWDHFTKLDGDPTTSRAEYNYCGKDYACHTIINGTSNMWSHLKVCKKFPFVVIKK 116

Query: 190 TNNSQTTLNMKQTKDGNS-------QLVAVSFKVEACRRALTKMIIVDDFPFRIVEGEGF 348
               Q  L ++  K G          L A+ ++ + CR+AL KM+I+D+ PF  +EG+GF
Sbjct: 117 ----QKILVLEPNKVGGELGDRSVGTLKAIGYEYDECRKALVKMVIIDELPFNFMEGKGF 172

Query: 349 REFVKVLQPKFVLP----FARDCIKLYFRRK*EVEECLENQ 459
           R F + LQP+F +P      RDC+KL+   K  ++  L+ Q
Sbjct: 173 RLFSRTLQPRFDIPSRFTVMRDCLKLHVEEKERLKRDLKGQ 213


>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score = 93.6 bits (231), Expect = 8e-17
 Identities = 58/166 (34%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
 Frame = +1

Query: 31   KSIAWDHFYIIEGSNPKRAQFKYC-----SCEGKTNGTTNMKNYIEK-ANNSPNYPCKKT 192
            KS  WDHF   +G    RA  K+C     + +   +GT+N+  ++ K     P +     
Sbjct: 957  KSWVWDHFIKEKG----RAMCKWCKNASYAADSHNSGTSNLSTHLRKQCKKFPKHLDPNY 1012

Query: 193  NNSQTTLNMKQTK--DGNSQLVAVSFKVEACRRALTKMIIVDDFPFRIVEGEGFREFVKV 366
            + +QT L+++ +K    NS +VAV F V+  R+AL +MIIVD+ PF  VE EGFR F+ V
Sbjct: 1013 DPNQTILSLQDSKGTSSNSTIVAVHFDVDVSRQALARMIIVDELPFSFVENEGFRYFMSV 1072

Query: 367  LQPKFVLP----FARDCIKLYFRRK*EVEECLENQTKPNCAQP*YW 492
             QP+  LP     ARDC+ LY   K ++        +  C     W
Sbjct: 1073 TQPRLPLPGRLAIARDCLNLYTSEKHKLRNMFTKANQSVCLTTDTW 1118


>ref|XP_002336966.1| predicted protein [Populus trichocarpa] gi|222837471|gb|EEE75850.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 13/148 (8%)
 Frame = +1

Query: 25  KRKSIAWDHFYIIEGSNPK--RAQFKYC----SCEGKTNGTTNMKNYIEKANNSPNYPCK 186
           ++KS  WDHF  ++  +PK  RA+  YC    +C    NGT+NM ++++     P    K
Sbjct: 57  RKKSQIWDHFTKLD-VDPKAPRAECNYCGKHYACHTIVNGTSNMWSHLKVCKKFPFVVDK 115

Query: 187 KTNNSQTTLNMKQTKDGNSQ---LVAVSFKVEACRRALTKMIIVDDFPFRIVEGEGFREF 357
           K         ++  + G      L A+ +  + CR+ L KM+I+D+ PF  VEG GF+ F
Sbjct: 116 KQKVLVLESKIENGELGEQNVGSLKAIGYNYDECRQTLAKMVIIDELPFNFVEGRGFKLF 175

Query: 358 VKVLQPKFVLP----FARDCIKLYFRRK 429
            + +QP+F +P      RDC+KLY   K
Sbjct: 176 ARTMQPRFDIPSRFTIMRDCLKLYVEEK 203


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