BLASTX nr result

ID: Cimicifuga21_contig00023478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023478
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335874.1| predicted protein [Populus trichocarpa] gi|2...    95   2e-17
ref|XP_002512347.1| conserved hypothetical protein [Ricinus comm...    68   3e-09
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    66   1e-08
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    64   4e-08
gb|AFW90627.1| hypothetical protein [Solanum tuberosum]                64   6e-08

>ref|XP_002335874.1| predicted protein [Populus trichocarpa] gi|222835929|gb|EEE74350.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 9/174 (5%)
 Frame = +3

Query: 183 KLPTDIWGMILPKLNLREFIRFGAVCRRWGSIAAENQPSLHGLPWLLICRDVHTQLGTFL 362
           ++P DI   I  K+++  + RF   C  W    +   P  H LPWL++  D + +   F 
Sbjct: 13  QVPADILEYIASKVSVAGYHRFLLFCTAWRRTTSMRPPFSH-LPWLMLSNDRNKKTRGFF 71

Query: 363 SLTDGEIYRLRLSELASTSFCCGSSQGYLIMANE-QGNFLFNPFLQTQITLPQQYTPPWV 539
            + D + Y++ L  +   S+C  SS G+ IMA++ +G+FLFNPF   +I LP  Y  P+ 
Sbjct: 72  CIHDSKFYQIPLPRVVRRSWCARSSYGWFIMAHKTRGDFLFNPFSGVRIPLPTHYNQPYS 131

Query: 540 L---CHYDYYFQKAILSMENTSQPVVAALC-----SDVHLVQTCRPQDAEWVVF 677
                   Y+  KAILS E T + + A  C      +V  +  CRP D  W  F
Sbjct: 132 FVRPASNPYFMTKAILSSEPTPENIAAGHCLVAALFEVDSLGICRPGDHAWTCF 185


>ref|XP_002512347.1| conserved hypothetical protein [Ricinus communis]
           gi|223548308|gb|EEF49799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 475

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 33/245 (13%)
 Frame = +3

Query: 183 KLPTDIWGMILPKLNLREFIRFGAVCRRWGSIAAENQ-PSLHGLPWLLIC---------- 329
           +LP D+  +I+ +L++ + +R  +VC+ W  +A +   P     PWL++           
Sbjct: 41  QLPDDLMKLIIQRLDVTDRLRICSVCKSWRFLATQRHVPLPPQFPWLMLSPTKSKTNRTR 100

Query: 330 -------RDVHTQLGTFLSLTDGEIYRLRLSELASTSFCCGSSQGYLIMA----NEQGNF 476
                  R    Q+ TF     G+I+ L L +     +C GSS+G+L +A     E   F
Sbjct: 101 LFPWSDDRSTCKQI-TFFDTVQGKIHNLELPKSLEGGWCFGSSKGWLFIAKGGKKEPQVF 159

Query: 477 LFNPF------LQTQITLPQQYTPPWVLCH-YDY----YFQKAILSMENTSQPVVAALCS 623
           L NP       L +  T+P  Y     L H YD+    Y     +S + + Q  + A+ +
Sbjct: 160 LLNPISKHILGLPSITTIPSYYNYLESLEHPYDFSSFIYKLDICVSEDASQQCTIVAILN 219

Query: 624 DVHLVQTCRPQDAEWVVFGRDEEDKDFKGHRYIEEFNAWTTDRKPYGEDELFSDILFYKG 803
              ++ +C+P+DA+W +  +        G               P   + +F  + FYKG
Sbjct: 220 TGEVLASCKPEDAKWTILFQ------LLG---------------PEDTNHMFMHMSFYKG 258

Query: 804 KLYGL 818
            LY L
Sbjct: 259 TLYVL 263


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 16/196 (8%)
 Frame = +3

Query: 135  LRKLSSVVVMESAPCFKLPTDIWGMILPKLN-LREFIRFGAVCRRWGSIAAENQ---PSL 302
            ++K++  V+ + +   K+P D   +I  KL+ + +++RFG VC+ W SI  + +   PS 
Sbjct: 911  IQKINQTVMADWS---KMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSS 967

Query: 303  HGLPWLLICRDVHTQLGTFLSLTDGEIYRLRLSELASTSFCCGSSQGYLI-MANEQGNFL 479
               PWL++    ++++  F S   G++Y +RL E+    +C GS  G+L+ +  +    L
Sbjct: 968  KS-PWLMLAEKENSEIRGFYSPLSGKVYEIRLPEVVG-KWCWGSPYGWLVTIGTDLDMCL 1025

Query: 480  FNPFLQTQITLPQQYTPPWVLC----------HYDYYFQKAILSMENTSQP-VVAALCSD 626
             NP  + QI LP     P +              D +  KA+LS   +S    V  + SD
Sbjct: 1026 LNPLTRVQILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSSPDCAVMIIYSD 1085

Query: 627  VHLVQTCRPQDAEWVV 674
               +   +P    W +
Sbjct: 1086 YGRLAFTKPGHQTWTL 1101


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 64/241 (26%), Positives = 99/241 (41%), Gaps = 29/241 (12%)
 Frame = +3

Query: 183 KLPTDIWGMILPKL-NLREFIRFGAVCRRWGS-IAAENQPSLHGLPWLLI-CRDVHTQLG 353
           +LP ++   I  K  N  ++I   AVC+ W S I  +    L  LPWLL+     +    
Sbjct: 6   ELPQELLQTITQKQSNYVDYISTRAVCKSWWSAIPKKPHDLLCQLPWLLLPYHKNNPNHR 65

Query: 354 TFLSLTDGEIYRLRLSELASTSFCCGSSQGYLIMANEQGN-FLFNPFLQTQITLPQQYTP 530
            F +L DG+ Y L L E      CCGSS G+L+M  +  + FL NP  + +I LP   T 
Sbjct: 66  GFYNLADGKTYHLELPETIEKR-CCGSSHGWLVMVEDTPSIFLLNPLTKARIELPSLSTF 124

Query: 531 PWVLCHYDY---------------------YFQKAILSME-NTSQPVVAALCSDVHLVQT 644
           P+      Y                     Y +KAI+S + +T    V A+   ++  + 
Sbjct: 125 PYFPTEVVYENSRNINEYFNTKAKLRIRETYIRKAIVSEDPSTGNFAVMAIYKTINSTEN 184

Query: 645 ---CRPQDAEWVVFGRDEEDKDFKGHRYIEEFNAWTTDRKPYGEDELFSDILFYKGKLYG 815
              C+  DA W                    F    T +K +     + D++F++GK Y 
Sbjct: 185 IAFCKSGDATW--------------------FTIQETSQKIH-----YQDVMFHRGKFYA 219

Query: 816 L 818
           +
Sbjct: 220 V 220


>gb|AFW90627.1| hypothetical protein [Solanum tuberosum]
          Length = 248

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 9/214 (4%)
 Frame = +3

Query: 228 LREFIRFGAVCRRWGSIA--AENQPSLHGLPWLLICRDVHTQLGTFLSLTDGEIYRLRLS 401
           + +++ FG VC+ W S+A  A     L   PWL++  +   ++  F SL +G I   R+ 
Sbjct: 22  IEDYLNFGRVCKSWHSVATKANFNNDLCRAPWLMLAEEEDNEVRKFFSLYNGMILNKRIP 81

Query: 402 ELASTSFCCGSSQGYLIMANEQGNF-LFNPFLQTQITLPQQYTPPWVLCH----YDYYFQ 566
           + +     C  S G+LI   E+G   L +PF   QI LP Q T      H       +  
Sbjct: 82  KASRKR--CLESMGWLITVGEEGEISLLHPFSDVQIELPHQNTTVEYNKHQTGALTCFIG 139

Query: 567 KAILSM--ENTSQPVVAALCSDVHLVQTCRPQDAEWVVFGRDEEDKDFKGHRYIEEFNAW 740
           KA+LS    +TS  ++  +      +   RP D  W           ++G  Y       
Sbjct: 140 KAVLSASPSHTSDYLLMVIDGGSRFLSFWRPGDIRWT-------RVTWEGINY------- 185

Query: 741 TTDRKPYGEDELFSDILFYKGKLYGLTQISGLVI 842
                       F+D++++ G++Y +     L++
Sbjct: 186 ----------SSFADLIYFNGQIYAVDYSGNLLV 209


Top