BLASTX nr result

ID: Cimicifuga21_contig00023465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023465
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...    57   2e-06

>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = +3

Query: 6   SEQAERHRKCRLWLESTLGMLCRPPSPELTE--ERLLPIERNIIDFINYNRAKRNIFSQQ 179
           +EQ E+ R  +  LE  +  L  P S  +    E+L   E+ II+FIN NR KR I S Q
Sbjct: 650 TEQLEKLRLFKSMLERIITFLQVPKSSVMPSFREKLGSYEKQIINFINTNRPKRQITSMQ 709

Query: 180 QGQKQLRPSGAYSPQTQIPQLQHSDNQMN 266
           QG  QL       PQ+Q+PQ+Q  ++QMN
Sbjct: 710 QG--QLSQPQIQQPQSQVPQVQSHESQMN 736


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