BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023397
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               115   3e-34
emb|CAH65871.1| OSIGBa0103I21.4 [Oryza sativa Indica Group]           106   9e-30
gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subc...   102   4e-29
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...   103   6e-29
emb|CAH65951.1| H0716A07.9 [Oryza sativa Indica Group]                103   6e-29

>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  115 bits (287), Expect(2) = 3e-34
 Identities = 55/95 (57%), Positives = 71/95 (74%)
 Frame = -2

Query: 431  TRPDIAYVVGRLNMYTQCHSVEY*IALERISKYLKCTIDYELKFRRPPPILEGYCDANWI 252
            +RPDIAY VGRL+  TQC S ++  AL R+ KYL+ T+DY +++   P +LEGY DANWI
Sbjct: 1073 SRPDIAYAVGRLSRCTQCPSQDHWEALARLMKYLRGTMDYAIEYSGFPAVLEGYSDANWI 1132

Query: 251  SDSDGIKFTGGYVFTLGGGAMSWKSSK*TCIVHST 147
            SDSD  K T GYVFTLGGGA++W+S++ T I  ST
Sbjct: 1133 SDSDETKSTSGYVFTLGGGAVTWRSARQTIIARST 1167



 Score = 55.1 bits (131), Expect(2) = 3e-34
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = -3

Query: 145  ECELIALDKACSEAEWLRNLLENLHVGDKPPPVIFMHCDCR 23
            E E +AL+ A SEAEWL+N L N+ +G KP P + MHCDC+
Sbjct: 1169 ESEFVALEMAGSEAEWLKNFLANIPLGMKPTPSVSMHCDCQ 1209


>emb|CAH65871.1| OSIGBa0103I21.4 [Oryza sativa Indica Group]
          Length = 964

 Score =  106 bits (264), Expect(2) = 9e-30
 Identities = 50/95 (52%), Positives = 67/95 (70%)
 Frame = -2

Query: 431  TRPDIAYVVGRLNMYTQCHSVEY*IALERISKYLKCTIDYELKFRRPPPILEGYCDANWI 252
            TRPDI++ V +L+ +      ++  ALER+ +YLK T+ Y + +   P +LEGY D+NWI
Sbjct: 788  TRPDISFAVSKLSRFVSNPRDDHWQALERVMRYLKGTMSYAIHYTGYPKVLEGYSDSNWI 847

Query: 251  SDSDGIKFTGGYVFTLGGGAMSWKSSK*TCIVHST 147
            SD+DGIK T GYVFTLGGGA+SWKS K T +  ST
Sbjct: 848  SDADGIKATSGYVFTLGGGAVSWKSCKQTILTRST 882



 Score = 48.9 bits (115), Expect(2) = 9e-30
 Identities = 24/39 (61%), Positives = 27/39 (69%)
 Frame = -3

Query: 145  ECELIALDKACSEAEWLRNLLENLHVGDKPPPVIFMHCD 29
            E EL ALD A  EAEWLR LL +L V +KP P I M+CD
Sbjct: 884  EAELTALDTATVEAEWLRELLMDLPVVEKPMPAILMNCD 922


>gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1235

 Score =  102 bits (253), Expect(2) = 4e-29
 Identities = 49/95 (51%), Positives = 66/95 (69%)
 Frame = -2

Query: 431  TRPDIAYVVGRLNMYTQCHSVEY*IALERISKYLKCTIDYELKFRRPPPILEGYCDANWI 252
            TRPDI++ V +L+ +T     ++  ALER+ +YLK T++  L +   P +LEGY D+NWI
Sbjct: 1028 TRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWI 1087

Query: 251  SDSDGIKFTGGYVFTLGGGAMSWKSSK*TCIVHST 147
            SD D IK T GYVFTLGGGA+SW+S K T +  ST
Sbjct: 1088 SDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRST 1122



 Score = 51.2 bits (121), Expect(2) = 4e-29
 Identities = 25/39 (64%), Positives = 28/39 (71%)
 Frame = -3

Query: 145  ECELIALDKACSEAEWLRNLLENLHVGDKPPPVIFMHCD 29
            E EL ALD A  EAEWLR+LL NL V +KP P I M+CD
Sbjct: 1124 EAELTALDTATVEAEWLRDLLMNLPVVEKPVPAILMNCD 1162


>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  103 bits (257), Expect(2) = 6e-29
 Identities = 49/95 (51%), Positives = 66/95 (69%)
 Frame = -2

Query: 431  TRPDIAYVVGRLNMYTQCHSVEY*IALERISKYLKCTIDYELKFRRPPPILEGYCDANWI 252
            TRPDI++ V +L+ +      ++  ALER+ +YLK T+ Y + +   P +LEGY D+NWI
Sbjct: 1061 TRPDISFAVSKLSQFVSNPGDDHWHALERVMRYLKGTMSYGIHYAGYPKVLEGYSDSNWI 1120

Query: 251  SDSDGIKFTGGYVFTLGGGAMSWKSSK*TCIVHST 147
            SD+D IK T GYVFTLGGGA+SWKS K T +  ST
Sbjct: 1121 SDADEIKATSGYVFTLGGGAVSWKSCKQTILTRST 1155



 Score = 48.9 bits (115), Expect(2) = 6e-29
 Identities = 24/39 (61%), Positives = 27/39 (69%)
 Frame = -3

Query: 145  ECELIALDKACSEAEWLRNLLENLHVGDKPPPVIFMHCD 29
            E EL ALD A  EAEWLR LL +L V +KP P I M+CD
Sbjct: 1157 EAELTALDTATVEAEWLRELLMDLPVVEKPVPAILMNCD 1195


>emb|CAH65951.1| H0716A07.9 [Oryza sativa Indica Group]
          Length = 1216

 Score =  103 bits (256), Expect(2) = 6e-29
 Identities = 50/95 (52%), Positives = 66/95 (69%)
 Frame = -2

Query: 431  TRPDIAYVVGRLNMYTQCHSVEY*IALERISKYLKCTIDYELKFRRPPPILEGYCDANWI 252
            TRPDI++ V +L+ +T     ++  ALER+ +YLK T++  L +   P +LEGY D+NWI
Sbjct: 991  TRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWI 1050

Query: 251  SDSDGIKFTGGYVFTLGGGAMSWKSSK*TCIVHST 147
            SD D IK T GYVFTLGGGA+SWKS K T +  ST
Sbjct: 1051 SDVDEIKATSGYVFTLGGGAVSWKSCKETILTRST 1085



 Score = 49.3 bits (116), Expect(2) = 6e-29
 Identities = 24/39 (61%), Positives = 28/39 (71%)
 Frame = -3

Query: 145  ECELIALDKACSEAEWLRNLLENLHVGDKPPPVIFMHCD 29
            E EL ALD A  EAEWLR+LL +L V +KP P I M+CD
Sbjct: 1087 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCD 1125