BLASTX nr result
ID: Cimicifuga21_contig00023324
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00023324
(2162 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22283.3| unnamed protein product [Vitis vinifera] 660 0.0
ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi... 657 0.0
ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|2... 594 e-167
ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containi... 581 e-163
ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containi... 581 e-163
>emb|CBI22283.3| unnamed protein product [Vitis vinifera]
Length = 626
Score = 660 bits (1703), Expect = 0.0
Identities = 353/624 (56%), Positives = 447/624 (71%), Gaps = 22/624 (3%)
Frame = -3
Query: 1875 LAEMLKGMVSIHITSN--VAHRGGCQNSYRNKVCAQSFQHILNVGSVNGKSNRGLVTVDG 1702
+AE+L+ ++I +TS+ C+ + ++ F L S K+N+ + G
Sbjct: 1 MAEVLRNSLAIIVTSSGFTCQYYSCRPTGGYRIHCSCFPRCLCYNSTI-KTNKKQLKGHG 59
Query: 1701 LDNVSIVEELYHWYCV-----------------QSPRITRGQPVSWSANALVFQEEQEDM 1573
+D +S+ E + V +PRI V+ + LV +E++E+M
Sbjct: 60 VDTISLRENGRSQFEVTGHIMMEMNLLFGSERRDTPRIVSNM-VACVQSGLVCEEDEENM 118
Query: 1572 LIQEREGESGILSSEQKLPPWGNVSQDGN-DFLTSG-DEPIADPESLVCKLEPKLHFLEE 1399
L Q R+ E EQK PP GN N DF G EP+ + + E KLHFLEE
Sbjct: 119 LNQRRKEEFDPSYFEQKFPPLGNSEIHKNPDFEHIGVAEPLTISTGISSEFEDKLHFLEE 178
Query: 1398 RDEEILSKRILGLSRCNKVRSALELYMSMEASGLQPNPHACNSLLSCLLRNGFLSDALKV 1219
R+E+ILSKRIL LSR NKVRS LELY +ME SGLQP+ HACNSLLSCLLRN L DAL+V
Sbjct: 179 RNEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRV 238
Query: 1218 FDTMK-KEMTSGHTYSLILKAIASSRGCDSVLKKFMELEKEGTLVNVFDAITYNTMISIC 1042
F++MK E T+GH+YSL+LKAIA+ +G DS LK F +LE E + FD I Y TMISIC
Sbjct: 239 FESMKANESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISIC 298
Query: 1041 GKANNWMQAERMWKNLKENGHCATIVTYNLLVSTFVRCGQTELAFDAYTEMVQNGLKASE 862
GK NNW Q ER+W+++KENG TIVTY LLVS FVRCGQ ELA DAY+EM+QNGLK E
Sbjct: 299 GKVNNWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGE 358
Query: 861 DTMQAIISACAKEGKWDSAHSVFQSMLKSGLHPNIVAYNALINSLGKAGEVELTFKIFGL 682
D M+AII ACAKEGKWD A SVFQSML GL PN++A NALINS+GK+G V+L F+++ +
Sbjct: 359 DAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDV 418
Query: 681 MRSSGHTPDAYTWNALIGALNRGNRYMDALQLFESIKRKKSVQLNLHLYNTALLSCQNLR 502
M+S GHTPD YTWNAL+GAL R N++ DAL LFESI R++S Q+NLHLYNTAL+SCQ L
Sbjct: 419 MKSLGHTPDVYTWNALLGALYRANQHADALHLFESI-REQSSQVNLHLYNTALMSCQKLG 477
Query: 501 LWDRSLQLLWQMEASDVPVSTESYNLVIGACEAARKPKVALQVYEQMVHKKCVPNMFTYL 322
LW+R+LQLLWQMEAS + VS+ SYNLVIGACE ARKP++ALQVYE MV ++C P+ FT+L
Sbjct: 478 LWNRALQLLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTPDTFTHL 537
Query: 321 SLIRACIWGSLWSEVKQILDHVPPDVSLYNAAIHGMCLRGNISSAKKIYLKMRESGLKPD 142
SLIR+CIWGSLW+EVK+IL+ DVSLYNAAI GMCLRG I SAKK+Y++MR+SGLKPD
Sbjct: 538 SLIRSCIWGSLWAEVKEILNRAGTDVSLYNAAIQGMCLRGKIESAKKLYMRMRKSGLKPD 597
Query: 141 GKTRSMMIQNLSRDSVKQNNRYLS 70
GKTR++M+QNL +D+++ +NR +S
Sbjct: 598 GKTRALMLQNLQKDAIRPSNRRIS 621
>ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Vitis vinifera]
Length = 546
Score = 657 bits (1696), Expect = 0.0
Identities = 336/530 (63%), Positives = 412/530 (77%), Gaps = 3/530 (0%)
Frame = -3
Query: 1650 SPRITRGQPVSWSANALVFQEEQEDMLIQEREGESGILSSEQKLPPWGNVSQDGN-DFLT 1474
+PRI V+ + LV +E++E+ML Q R+ E EQK PP GN N DF
Sbjct: 14 TPRIVSNM-VACVQSGLVCEEDEENMLNQRRKEEFDPSYFEQKFPPLGNSEIHKNPDFEH 72
Query: 1473 SG-DEPIADPESLVCKLEPKLHFLEERDEEILSKRILGLSRCNKVRSALELYMSMEASGL 1297
G EP+ + + E KLHFLEER+E+ILSKRIL LSR NKVRS LELY +ME SGL
Sbjct: 73 IGVAEPLTISTGISSEFEDKLHFLEERNEQILSKRILMLSRSNKVRSVLELYRTMEFSGL 132
Query: 1296 QPNPHACNSLLSCLLRNGFLSDALKVFDTMK-KEMTSGHTYSLILKAIASSRGCDSVLKK 1120
QP+ HACNSLLSCLLRN L DAL+VF++MK E T+GH+YSL+LKAIA+ +G DS LK
Sbjct: 133 QPSSHACNSLLSCLLRNEMLDDALRVFESMKANESTTGHSYSLVLKAIANIQGYDSALKM 192
Query: 1119 FMELEKEGTLVNVFDAITYNTMISICGKANNWMQAERMWKNLKENGHCATIVTYNLLVST 940
F +LE E + FD I Y TMISICGK NNW Q ER+W+++KENG TIVTY LLVS
Sbjct: 193 FSKLEVECKVKKDFDVIAYTTMISICGKVNNWAQTERIWRSMKENGLVGTIVTYRLLVSV 252
Query: 939 FVRCGQTELAFDAYTEMVQNGLKASEDTMQAIISACAKEGKWDSAHSVFQSMLKSGLHPN 760
FVRCGQ ELA DAY+EM+QNGLK ED M+AII ACAKEGKWD A SVFQSML GL PN
Sbjct: 253 FVRCGQNELAIDAYSEMIQNGLKPGEDAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPN 312
Query: 759 IVAYNALINSLGKAGEVELTFKIFGLMRSSGHTPDAYTWNALIGALNRGNRYMDALQLFE 580
++A NALINS+GK+G V+L F+++ +M+S GHTPD YTWNAL+GAL R N++ DAL LFE
Sbjct: 313 LIACNALINSIGKSGNVKLAFRVYDVMKSLGHTPDVYTWNALLGALYRANQHADALHLFE 372
Query: 579 SIKRKKSVQLNLHLYNTALLSCQNLRLWDRSLQLLWQMEASDVPVSTESYNLVIGACEAA 400
SI R++S Q+NLHLYNTAL+SCQ L LW+R+LQLLWQMEAS + VS+ SYNLVIGACE A
Sbjct: 373 SI-REQSSQVNLHLYNTALMSCQKLGLWNRALQLLWQMEASGLSVSSASYNLVIGACEVA 431
Query: 399 RKPKVALQVYEQMVHKKCVPNMFTYLSLIRACIWGSLWSEVKQILDHVPPDVSLYNAAIH 220
RKP++ALQVYE MV ++C P+ FT+LSLIR+CIWGSLW+EVK+IL+ DVSLYNAAI
Sbjct: 432 RKPEIALQVYEHMVQQQCTPDTFTHLSLIRSCIWGSLWAEVKEILNRAGTDVSLYNAAIQ 491
Query: 219 GMCLRGNISSAKKIYLKMRESGLKPDGKTRSMMIQNLSRDSVKQNNRYLS 70
GMCLRG I SAKK+Y++MR+SGLKPDGKTR++M+QNL +D+++ +NR +S
Sbjct: 492 GMCLRGKIESAKKLYMRMRKSGLKPDGKTRALMLQNLQKDAIRPSNRRIS 541
>ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|222866890|gb|EEF04021.1|
predicted protein [Populus trichocarpa]
Length = 487
Score = 594 bits (1532), Expect = e-167
Identities = 296/476 (62%), Positives = 368/476 (77%), Gaps = 5/476 (1%)
Frame = -3
Query: 1497 QDGNDFLTSGDEPIADPESL----VCKLEPKLHFLEERDEEILSKRILGLSRCNKVRSAL 1330
Q G+D +E I SL V E ++HFLEE DE LS+RIL LSR NK+RSAL
Sbjct: 11 QQGSDI---NNEKIVQSPSLLNNRVTVNESRVHFLEETDENELSRRILMLSRSNKIRSAL 67
Query: 1329 ELYMSMEASGLQPNPHACNSLLSCLLRNGFLSDALKVFDTMKK-EMTSGHTYSLILKAIA 1153
+L SME SGLQPN HACNSLLSCL+R+ DAL+VF+ MKK E+T+GH YSLILKA+A
Sbjct: 68 QLLRSMEFSGLQPNTHACNSLLSCLIRHELHEDALRVFEYMKKNEITTGHAYSLILKAVA 127
Query: 1152 SSRGCDSVLKKFMELEKEGTLVNVFDAITYNTMISICGKANNWMQAERMWKNLKENGHCA 973
S++GCDS L F ELE FD I YNTMIS+CGK NW++ ER+W+++KEN +
Sbjct: 128 STKGCDSALDMFTELEAFSREKKDFDVIVYNTMISVCGKEKNWVETERIWRSMKENDYHG 187
Query: 972 TIVTYNLLVSTFVRCGQTELAFDAYTEMVQNGLKASEDTMQAIISACAKEGKWDSAHSVF 793
T VTY+LLVS FVRCG+ ELA +AY+EMVQNGLK EDT+ A+I AC+K+G WD A ++F
Sbjct: 188 TQVTYSLLVSIFVRCGRNELALEAYSEMVQNGLKPREDTLHAVIGACSKKGNWDLALNIF 247
Query: 792 QSMLKSGLHPNIVAYNALINSLGKAGEVELTFKIFGLMRSSGHTPDAYTWNALIGALNRG 613
Q+ML GL PN++A NALIN LGKAGE++L FK+F +++S GHTPD YTWNAL+ L R
Sbjct: 248 QNMLDHGLKPNLIACNALINLLGKAGEIKLAFKVFKILKSLGHTPDEYTWNALLSGLYRA 307
Query: 612 NRYMDALQLFESIKRKKSVQLNLHLYNTALLSCQNLRLWDRSLQLLWQMEASDVPVSTES 433
N+++DALQLFE +KR+++ LN HLYNTAL+SCQ L LWDR+LQL+WQ EAS + VST S
Sbjct: 308 NQHVDALQLFERLKREQNSLLNEHLYNTALMSCQKLGLWDRALQLVWQAEASGLSVSTAS 367
Query: 432 YNLVIGACEAARKPKVALQVYEQMVHKKCVPNMFTYLSLIRACIWGSLWSEVKQILDHVP 253
YNL IGACE ARKP+VAL+VYE MVH+KC P+ FTYLSLIR+CIW SLW EV++ILD V
Sbjct: 368 YNLAIGACEVARKPEVALEVYEHMVHQKCPPDTFTYLSLIRSCIWASLWDEVEEILDQVA 427
Query: 252 PDVSLYNAAIHGMCLRGNISSAKKIYLKMRESGLKPDGKTRSMMIQNLSRDSVKQN 85
PDVSLYNA IHGMCLRG SAKK+Y+KM +SGLKPDG ++M+QNL ++S K++
Sbjct: 428 PDVSLYNAVIHGMCLRGKTESAKKLYMKMGKSGLKPDG---ALMLQNLRKNSTKRS 480
>ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Cucumis sativus]
Length = 600
Score = 581 bits (1498), Expect = e-163
Identities = 294/512 (57%), Positives = 380/512 (74%), Gaps = 4/512 (0%)
Frame = -3
Query: 1593 QEEQEDMLIQEREGESGILSSEQKLPPWGNVSQDGNDFLTSGDEPIADPESLVCKL---E 1423
++E +++I E ES S E KLPPWG+++ D T E + P+ L K+ E
Sbjct: 84 EDEAIELVIDEGVEES---SREWKLPPWGDIAHQ--DEATFQSEDVNQPKILEGKVLENE 138
Query: 1422 PKLHFLEERDEEILSKRILGLSRCNKVRSALELYMSMEASGLQPNPHACNSLLSCLLRNG 1243
KLHFLEE D+ +LSKRIL LSR NKVRSALEL SM+ +GL P+ HA NSLL+CLLRN
Sbjct: 139 SKLHFLEETDKVMLSKRILILSRKNKVRSALELLRSMQLAGLLPSLHALNSLLACLLRNE 198
Query: 1242 FLSDALKVFDTMK-KEMTSGHTYSLILKAIASSRGCDSVLKKFMELEKEGTLVNVFDAIT 1066
+D L++F+ MK E+++GHTYSL+LKA+A++ G S L+ F E + L FDAI
Sbjct: 199 LFADGLRIFEFMKLNELSTGHTYSLVLKAVANAHGFLSALEMFKAWEHQCVLAQ-FDAIV 257
Query: 1065 YNTMISICGKANNWMQAERMWKNLKENGHCATIVTYNLLVSTFVRCGQTELAFDAYTEMV 886
YNTMISICGK NNW++AER W+ +++NG AT +TY+LLVSTFVRC Q ELA D Y +MV
Sbjct: 258 YNTMISICGKDNNWVEAERTWRLMEKNGCGATRITYSLLVSTFVRCNQNELAIDTYVKMV 317
Query: 885 QNGLKASEDTMQAIISACAKEGKWDSAHSVFQSMLKSGLHPNIVAYNALINSLGKAGEVE 706
QN K DTMQAII A +KEGKWD A VFQ MLK GL PN V++NALIN+LGKA EV
Sbjct: 318 QNSFKPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVT 377
Query: 705 LTFKIFGLMRSSGHTPDAYTWNALIGALNRGNRYMDALQLFESIKRKKSVQLNLHLYNTA 526
L F ++ +M+S GH+PD YTWNAL+GAL + NRY DA+ LFE +KR+K VQLN+H+YNT
Sbjct: 378 LAFSVYNVMKSMGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREK-VQLNIHIYNTI 436
Query: 525 LLSCQNLRLWDRSLQLLWQMEASDVPVSTESYNLVIGACEAARKPKVALQVYEQMVHKKC 346
L+SC L LW+R++Q+LW+ME S + +ST SYN+V+ ACE ARKP++ALQVYE+MVH+K
Sbjct: 437 LMSCSKLGLWERAVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKL 496
Query: 345 VPNMFTYLSLIRACIWGSLWSEVKQILDHVPPDVSLYNAAIHGMCLRGNISSAKKIYLKM 166
P+ FT+LSLIR CIWGSLW EV+ +L+ PDVS+YN I GMCLRG AKK+Y KM
Sbjct: 497 TPDTFTHLSLIRCCIWGSLWDEVELLLNKSAPDVSVYNVVIQGMCLRGKSDLAKKLYTKM 556
Query: 165 RESGLKPDGKTRSMMIQNLSRDSVKQNNRYLS 70
RE+G++PDGKTR++M+QNL +D ++ NR+ S
Sbjct: 557 RENGIQPDGKTRALMLQNLPKDPARRKNRWAS 588
>ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Cucumis sativus]
Length = 600
Score = 581 bits (1498), Expect = e-163
Identities = 294/512 (57%), Positives = 380/512 (74%), Gaps = 4/512 (0%)
Frame = -3
Query: 1593 QEEQEDMLIQEREGESGILSSEQKLPPWGNVSQDGNDFLTSGDEPIADPESLVCKL---E 1423
++E +++I E ES S E KLPPWG+++ D T E + P+ L K+ E
Sbjct: 84 EDEAIELVIDEGVEES---SREWKLPPWGDIAHQ--DEATFQSEDVNQPKILEGKVLENE 138
Query: 1422 PKLHFLEERDEEILSKRILGLSRCNKVRSALELYMSMEASGLQPNPHACNSLLSCLLRNG 1243
KLHFLEE D+ +LSKRIL LSR NKVRSALEL SM+ +GL P+ HA NSLL+CLLRN
Sbjct: 139 SKLHFLEETDKVMLSKRILILSRKNKVRSALELLRSMQLAGLLPSLHALNSLLACLLRNE 198
Query: 1242 FLSDALKVFDTMK-KEMTSGHTYSLILKAIASSRGCDSVLKKFMELEKEGTLVNVFDAIT 1066
+D L++F+ MK E+++GHTYSL+LKA+A++ G S L+ F E + L FDAI
Sbjct: 199 LFADGLRIFEFMKLNELSTGHTYSLVLKAVANAHGFLSALEMFKAWEHQCVLAQ-FDAIV 257
Query: 1065 YNTMISICGKANNWMQAERMWKNLKENGHCATIVTYNLLVSTFVRCGQTELAFDAYTEMV 886
YNTMISICGK NNW++AER W+ +++NG AT +TY+LLVSTFVRC Q ELA D Y +MV
Sbjct: 258 YNTMISICGKDNNWVEAERTWRLMEKNGCSATRITYSLLVSTFVRCNQNELAIDTYVKMV 317
Query: 885 QNGLKASEDTMQAIISACAKEGKWDSAHSVFQSMLKSGLHPNIVAYNALINSLGKAGEVE 706
QN K DTMQAII A +KEGKWD A VFQ MLK GL PN V++NALIN+LGKA EV
Sbjct: 318 QNSFKPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVT 377
Query: 705 LTFKIFGLMRSSGHTPDAYTWNALIGALNRGNRYMDALQLFESIKRKKSVQLNLHLYNTA 526
L F ++ +M+S GH+PD YTWNAL+GAL + NRY DA+ LFE +KR+K VQLN+H+YNT
Sbjct: 378 LAFSVYNVMKSMGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREK-VQLNIHIYNTI 436
Query: 525 LLSCQNLRLWDRSLQLLWQMEASDVPVSTESYNLVIGACEAARKPKVALQVYEQMVHKKC 346
L+SC L LW+R++Q+LW+ME S + +ST SYN+V+ ACE ARKP++ALQVYE+MVH+K
Sbjct: 437 LMSCSKLGLWERAVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKH 496
Query: 345 VPNMFTYLSLIRACIWGSLWSEVKQILDHVPPDVSLYNAAIHGMCLRGNISSAKKIYLKM 166
P+ FT+LSLIR CIWGSLW EV+ +L+ PDVS+YN I GMCLRG AKK+Y KM
Sbjct: 497 TPDTFTHLSLIRCCIWGSLWDEVELLLNKSAPDVSVYNVVIQGMCLRGKSDLAKKLYTKM 556
Query: 165 RESGLKPDGKTRSMMIQNLSRDSVKQNNRYLS 70
RE+G++PDGKTR++M+QNL +D ++ NR+ S
Sbjct: 557 RENGIQPDGKTRALMLQNLPKDPARRKNRWAS 588