BLASTX nr result

ID: Cimicifuga21_contig00023231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023231
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324514.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|NP_001148939.1| S-adenosylmethionine decarboxylase proenzyme...   166   2e-39
ref|XP_002446740.1| hypothetical protein SORBIDRAFT_06g021540 [S...   165   3e-39
ref|NP_001105713.1| S-adenosylmethionine decarboxylase proenzyme...   164   5e-39
gb|ACG40518.1| S-adenosylmethionine decarboxylase proenzyme [Zea...   164   5e-39

>ref|XP_002324514.1| predicted protein [Populus trichocarpa] gi|222865948|gb|EEF03079.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  170 bits (430), Expect = 1e-40
 Identities = 83/126 (65%), Positives = 95/126 (75%), Gaps = 5/126 (3%)
 Frame = -1

Query: 363 EMTNLSGINEILPESKICDFDFDPCGYSMNAIDGSGLSTIHVTPEDGFSYASYEAMRFDT 184
           EMT +SGINEI+P   ICDFDFDPCGYSMN IDG+ LST+HVTPEDGFSYASYEA  FD 
Sbjct: 209 EMTKMSGINEIMPSHMICDFDFDPCGYSMNGIDGTALSTVHVTPEDGFSYASYEATGFDC 268

Query: 183 SLVEFKPLIKRVLKCFGPSDFSIAVTCDG----GVDTWGQEDA-VDGYSCESSVKQELAG 19
             V  + L++RVLKCFGP DFS+AVTC G    GV  W  E A V+GY C+S V+QEL G
Sbjct: 269 GEVRLRGLVQRVLKCFGPRDFSVAVTCHGGGGIGVQWWAIECADVEGYLCDSVVRQELPG 328

Query: 18  GASVVY 1
           G  +VY
Sbjct: 329 GGCLVY 334


>ref|NP_001148939.1| S-adenosylmethionine decarboxylase proenzyme [Zea mays]
           gi|195623432|gb|ACG33546.1| S-adenosylmethionine
           decarboxylase proenzyme [Zea mays]
           gi|224031153|gb|ACN34652.1| unknown [Zea mays]
           gi|413918808|gb|AFW58740.1| S-adenosylmethionine
           decarboxylase proenzyme [Zea mays]
          Length = 393

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/125 (62%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
 Frame = -1

Query: 366 KEMTNLSGINEILPESKICDFDFDPCGYSMNAIDGSGLSTIHVTPEDGFSYASYEAMRFD 187
           KEMT LSGI+EI+PE +ICDFDF+PCGYSMNAI GS  STIHVTPEDGFSYASYE M  D
Sbjct: 215 KEMTKLSGISEIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVMGLD 274

Query: 186 TSLVEFKPLIKRVLKCFGPSDFSIAVTCDGG---VDTWGQEDAVDGYSCESSVKQELAGG 16
            + + +  L+KRVL CFGPS+FS+AVT  GG     TWG+E   + Y C + V+QEL GG
Sbjct: 275 ATALSYGDLVKRVLGCFGPSEFSVAVTIFGGRGQAGTWGKELGAEAYDCNNMVEQELPGG 334

Query: 15  ASVVY 1
             ++Y
Sbjct: 335 GILIY 339


>ref|XP_002446740.1| hypothetical protein SORBIDRAFT_06g021540 [Sorghum bicolor]
           gi|241937923|gb|EES11068.1| hypothetical protein
           SORBIDRAFT_06g021540 [Sorghum bicolor]
          Length = 396

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/125 (61%), Positives = 95/125 (76%), Gaps = 3/125 (2%)
 Frame = -1

Query: 366 KEMTNLSGINEILPESKICDFDFDPCGYSMNAIDGSGLSTIHVTPEDGFSYASYEAMRFD 187
           KEMT LSGI+EI+PE +ICDFDF+PCGYSMNAI GS  STIHVTPEDGFSYASYE M FD
Sbjct: 215 KEMTKLSGISEIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVMGFD 274

Query: 186 TSLVEFKPLIKRVLKCFGPSDFSIAVTCDGG---VDTWGQEDAVDGYSCESSVKQELAGG 16
            + + +  L+KRVL+CFGP +FS+AVT  GG     TWG++   + Y C + V+QEL GG
Sbjct: 275 ATALSYGDLVKRVLRCFGPLEFSVAVTIFGGRGQAGTWGKQLGAEVYDCNNMVEQELPGG 334

Query: 15  ASVVY 1
             ++Y
Sbjct: 335 GLLIY 339


>ref|NP_001105713.1| S-adenosylmethionine decarboxylase proenzyme [Zea mays]
           gi|3913427|sp|O24575.1|DCAM_MAIZE RecName:
           Full=S-adenosylmethionine decarboxylase proenzyme;
           Short=AdoMetDC; Short=SAMDC; Contains: RecName:
           Full=S-adenosylmethionine decarboxylase alpha chain;
           Contains: RecName: Full=S-adenosylmethionine
           decarboxylase beta chain; Flags: Precursor
           gi|1532073|emb|CAA69075.1| S-adenosylmethionine
           decarboxylase [Zea mays] gi|194707464|gb|ACF87816.1|
           unknown [Zea mays] gi|414586539|tpg|DAA37110.1| TPA:
           S-adenosyl methionine decarboxylase2 isoform 1 [Zea
           mays] gi|414586540|tpg|DAA37111.1| TPA: S-adenosyl
           methionine decarboxylase2 isoform 2 [Zea mays]
          Length = 400

 Score =  164 bits (416), Expect = 5e-39
 Identities = 78/125 (62%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
 Frame = -1

Query: 366 KEMTNLSGINEILPESKICDFDFDPCGYSMNAIDGSGLSTIHVTPEDGFSYASYEAMRFD 187
           KEMT LSGI+EI+PE +ICDFDF+PCGYSMNAI GS  STIHVTPEDGFSYASYE M  D
Sbjct: 215 KEMTKLSGISEIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVMGLD 274

Query: 186 TSLVEFKPLIKRVLKCFGPSDFSIAVTCDGG---VDTWGQEDAVDGYSCESSVKQELAGG 16
            + + +  L+KRVL+CFGPS+FS+AVT  GG     TWG+    + Y C + V+QEL GG
Sbjct: 275 ATALSYGDLVKRVLRCFGPSEFSVAVTIFGGRGHAGTWGKALGAEVYDCNNMVEQELPGG 334

Query: 15  ASVVY 1
             +VY
Sbjct: 335 GLLVY 339


>gb|ACG40518.1| S-adenosylmethionine decarboxylase proenzyme [Zea mays]
          Length = 400

 Score =  164 bits (416), Expect = 5e-39
 Identities = 78/125 (62%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
 Frame = -1

Query: 366 KEMTNLSGINEILPESKICDFDFDPCGYSMNAIDGSGLSTIHVTPEDGFSYASYEAMRFD 187
           KEMT LSGI+EI+PE +ICDFDF+PCGYSMNAI GS  STIHVTPEDGFSYASYE M  D
Sbjct: 215 KEMTKLSGISEIIPEMEICDFDFEPCGYSMNAIHGSSFSTIHVTPEDGFSYASYEVMGLD 274

Query: 186 TSLVEFKPLIKRVLKCFGPSDFSIAVTCDGG---VDTWGQEDAVDGYSCESSVKQELAGG 16
            + + +  L+KRVL+CFGPS+FS+AVT  GG     TWG+    + Y C + V+QEL GG
Sbjct: 275 ATALSYGDLVKRVLRCFGPSEFSVAVTIFGGRGHTGTWGKALGAEVYDCNNMVEQELPGG 334

Query: 15  ASVVY 1
             +VY
Sbjct: 335 GLLVY 339


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