BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023200
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   164   7e-39
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   162   2e-38
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   157   6e-37
ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|2...   157   8e-37
ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35

>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  164 bits (415), Expect = 7e-39
 Identities = 76/138 (55%), Positives = 107/138 (77%)
 Frame = -3

Query: 417 KMTNESTIHATVKAVVDVVLKSDWNDDVKKKLGEFEVTLSENAILKIFRALREVPLKALG 238
           +M  E+ +   VK VV++V  S W+ +V+KKLGE + + S+N +L + R LR  PLKAL 
Sbjct: 191 RMVQENAMDEVVKKVVELVTMSVWSSEVEKKLGELKNSFSDNFVLHVLRELRGYPLKALR 250

Query: 237 FFRWVEDHKGYTHNAVTYNSILRVLGQEESIVRFWGVVKELKSLGHDIDIDTYIKISRQF 58
           FF+WV +  GY H+++TYN I RVLG+++SI  FW +V+E+KS GH++DIDTYIKISRQF
Sbjct: 251 FFQWVGECPGYEHSSITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKISRQF 310

Query: 57  QKNRMMKDAVELYELMMD 4
           QKN+M++DAV+LYE+MMD
Sbjct: 311 QKNKMLEDAVKLYEIMMD 328



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/119 (30%), Positives = 71/119 (59%)
 Frame = -3

Query: 378 AVVDVVLKSDWNDDVKKKLGEFEVTLSENAILKIFRALREVPLKALGFFRWVEDHKGYTH 199
           ++V++VL++DW+D+++ +L +    L+   ++ + + L + P +   FF WV +  G+  
Sbjct: 67  SIVELVLENDWSDELESELEKSSSVLTHETVIYVLKKLDKDPQRTWNFFNWVTEKNGFRP 126

Query: 198 NAVTYNSILRVLGQEESIVRFWGVVKELKSLGHDIDIDTYIKISRQFQKNRMMKDAVEL 22
           ++  Y+ ILR L   ES+ +FW  ++++K  G  ID +TY+ I   F+K +M  + V L
Sbjct: 127 SSAMYSLILRSLVHGESMKQFWVTIRKMKEQGFCIDKETYLTILGVFKKGKMASEEVAL 185


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  162 bits (411), Expect = 2e-38
 Identities = 75/138 (54%), Positives = 104/138 (75%)
 Frame = -3

Query: 417 KMTNESTIHATVKAVVDVVLKSDWNDDVKKKLGEFEVTLSENAILKIFRALREVPLKALG 238
           +M  ++ + + V+ VVD+VL SDW++DV  KL E  + LS+N ++++ + LR  PLKAL 
Sbjct: 184 RMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLKALS 243

Query: 237 FFRWVEDHKGYTHNAVTYNSILRVLGQEESIVRFWGVVKELKSLGHDIDIDTYIKISRQF 58
           FF WV     Y HN V+YN+I RVLG+++SI  FWGV++E+K   H+IDIDTYIKISRQF
Sbjct: 244 FFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQF 303

Query: 57  QKNRMMKDAVELYELMMD 4
           QK++MM +AV+LYELMMD
Sbjct: 304 QKSKMMGEAVKLYELMMD 321



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/120 (27%), Positives = 64/120 (53%)
 Frame = -3

Query: 381 KAVVDVVLKSDWNDDVKKKLGEFEVTLSENAILKIFRALREVPLKALGFFRWVEDHKGYT 202
           ++++ +V  +DW++ ++ +L     TL+   ++ + + L + P KA  FF W     G T
Sbjct: 59  QSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGST 118

Query: 201 HNAVTYNSILRVLGQEESIVRFWGVVKELKSLGHDIDIDTYIKISRQFQKNRMMKDAVEL 22
            ++  Y+ +LR+  Q ES+  FW  ++ +K  G  +D +TY  I    +K++   DA  L
Sbjct: 119 QSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGL 178


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  157 bits (398), Expect = 6e-37
 Identities = 69/138 (50%), Positives = 102/138 (73%)
 Frame = -3

Query: 417 KMTNESTIHATVKAVVDVVLKSDWNDDVKKKLGEFEVTLSENAILKIFRALREVPLKALG 238
           +M  E+ + + V  VV ++ +S+W D+V  +L + E+ LS+N ++++ + LR+ PLKA  
Sbjct: 190 RMLEENAMQSVVSNVVGIISRSEWGDEVVGELAKLEIQLSDNFVIRVLKELRKTPLKAYK 249

Query: 237 FFRWVEDHKGYTHNAVTYNSILRVLGQEESIVRFWGVVKELKSLGHDIDIDTYIKISRQF 58
           FF WV    GY H+ VTYN++ RVL + ESI  FW V++E+K +GH++DIDTYIKI+RQ 
Sbjct: 250 FFHWVGKQSGYEHDTVTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIKITRQL 309

Query: 57  QKNRMMKDAVELYELMMD 4
           Q+NRMM+DAV+LYELMMD
Sbjct: 310 QRNRMMEDAVKLYELMMD 327



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/119 (27%), Positives = 68/119 (57%)
 Frame = -3

Query: 378 AVVDVVLKSDWNDDVKKKLGEFEVTLSENAILKIFRALREVPLKALGFFRWVEDHKGYTH 199
           ++V+++L +DW+  ++ KL     ++    +L + + L + P KA  FF WV     +  
Sbjct: 66  SIVELLLTNDWSQALELKLENRFPSMPHETVLYVIKRLDKNPEKASCFFNWVCKKVWFRP 125

Query: 198 NAVTYNSILRVLGQEESIVRFWGVVKELKSLGHDIDIDTYIKISRQFQKNRMMKDAVEL 22
           +   Y+ I+R+L  ++++ +FW  ++ +K  G  +D +TY+ IS  F++ +M  D+V L
Sbjct: 126 SCSVYSLIVRILAAKDTMKQFWVTLRMMKENGFFLDEETYLTISVGFKREKMDSDSVAL 184


>ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|222868635|gb|EEF05766.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  157 bits (397), Expect = 8e-37
 Identities = 70/138 (50%), Positives = 105/138 (76%)
 Frame = -3

Query: 417 KMTNESTIHATVKAVVDVVLKSDWNDDVKKKLGEFEVTLSENAILKIFRALREVPLKALG 238
           +M +E+     VK VV ++L+ +WN +V+KKL    + L++N ++++ + LR  P+KAL 
Sbjct: 38  RMIDENAKDNVVKDVVRIILEREWNKEVEKKLVGMRIVLTDNFVIRVLKELRSYPVKALR 97

Query: 237 FFRWVEDHKGYTHNAVTYNSILRVLGQEESIVRFWGVVKELKSLGHDIDIDTYIKISRQF 58
           FF+WV+  +GY HN VTYN+++RVLG+++SI  FW VV E+K+ G+++DIDTYIKISRQF
Sbjct: 98  FFQWVDRREGYQHNTVTYNALVRVLGRDDSIGEFWSVVDEMKNAGYEMDIDTYIKISRQF 157

Query: 57  QKNRMMKDAVELYELMMD 4
           QK ++M+DAV LYE MMD
Sbjct: 158 QKIKLMEDAVRLYEFMMD 175


>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  152 bits (384), Expect = 3e-35
 Identities = 67/134 (50%), Positives = 96/134 (71%)
 Frame = -3

Query: 405 ESTIHATVKAVVDVVLKSDWNDDVKKKLGEFEVTLSENAILKIFRALREVPLKALGFFRW 226
           E+ +   V  VVD++  S+W D+V   L + E+ +S+N + ++ + LR  PLKA  FF W
Sbjct: 198 ENAMQIVVTKVVDIISGSEWGDEVMSNLAKLEIRMSDNFVTRVLKELRNCPLKAYEFFNW 257

Query: 225 VEDHKGYTHNAVTYNSILRVLGQEESIVRFWGVVKELKSLGHDIDIDTYIKISRQFQKNR 46
           V    GY H+ VTYN+I RVL   +SI +FW V++E+KS+GH++DIDTYIKIS++ QKN+
Sbjct: 258 VGKQSGYEHDTVTYNAIARVLASTDSIEKFWSVIEEMKSVGHELDIDTYIKISKKLQKNK 317

Query: 45  MMKDAVELYELMMD 4
           MM+DAV+LYEL MD
Sbjct: 318 MMEDAVKLYELTMD 331



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/119 (31%), Positives = 66/119 (55%)
 Frame = -3

Query: 378 AVVDVVLKSDWNDDVKKKLGEFEVTLSENAILKIFRALREVPLKALGFFRWVEDHKGYTH 199
           ++V++VL SDW+  ++++L +   +++   ++ + + +   P KA  FF WV   + Y  
Sbjct: 70  SIVELVLTSDWSKGLEQELEKCYPSMTHETVVYVLKRMEANPEKAWCFFNWVSAKEWYRP 129

Query: 198 NAVTYNSILRVLGQEESIVRFWGVVKELKSLGHDIDIDTYIKISRQFQKNRMMKDAVEL 22
           ++  Y  ILRVL  EE+I  FW  ++ +K+ G   D + Y  I   F++  M KD V L
Sbjct: 130 SSSLYGLILRVLATEETIKLFWITLRTMKTKGFYFDEEMYFPILAGFKRKNMNKDRVSL 188