BLASTX nr result

ID: Cimicifuga21_contig00023191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023191
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315264.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09
emb|CBI25321.3| unnamed protein product [Vitis vinifera]               58   1e-06
emb|CAN81622.1| hypothetical protein VITISV_012437 [Vitis vinifera]    58   1e-06
ref|XP_002275708.2| PREDICTED: uncharacterized protein LOC100241...    57   2e-06
ref|XP_003536786.1| PREDICTED: uncharacterized protein LOC100780...    56   4e-06

>ref|XP_002315264.1| predicted protein [Populus trichocarpa] gi|222864304|gb|EEF01435.1|
           predicted protein [Populus trichocarpa]
          Length = 954

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
 Frame = +2

Query: 83  FSC--DAIAFPNSTSNIPHQPSDYPVCNRSLNPERQQFSDRLGERAGSRKECLTQNFNSP 256
           FSC  D     +S+S+  HQ  D+    R+L PER+  + R         E         
Sbjct: 98  FSCTNDETISSSSSSSGAHQQRDHSSRRRNLTPERRAKTKRF--------EVAATGLERS 149

Query: 257 GSSKLDYDXXXXXXXXXRFPRKCESARFDHASNEVLDLYIDGEQKDSNTRTKVTSSPRKP 436
           G SK  YD                ++   + S++++D YIDGEQ+   ++ K  S  R  
Sbjct: 150 GHSKSHYDSSG-------------NSSSSNVSSKIVDRYIDGEQEQEMSKPKHCSQ-RNF 195

Query: 437 SANANRNGWRPPKVQSTAPGTPTGSFSELSGSHSIKEMRDSSLHLITRN 583
           + + N  G  PP+VQ TAP +P  +  +   SHS +E R +     +RN
Sbjct: 196 TGSGNAGGRLPPRVQYTAPASPADNIKDKPRSHSFREFRGARQKFSSRN 244


>emb|CBI25321.3| unnamed protein product [Vitis vinifera]
          Length = 920

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
 Frame = +2

Query: 83  FSCDAIAFPNSTSNIPHQPSDYPVCNRSLNPERQQFSDRLGERAGSRKECLTQNFNSPGS 262
           +SC +    + +SN   QP      +R   PERQ    +  E    R     +   S GS
Sbjct: 56  WSCLSDQSRSPSSNTSVQPHS----SRRCTPERQSKGKQF-EAEVMRNAHGLERPGSAGS 110

Query: 263 SKLDYDXXXXXXXXXRFPRKCESARF--DHASNEVLDLYIDGEQKDSNTRTKVTSSPRKP 436
           S+   D               ES+ F   + S +VLD +IDGEQ+   +R K + S +  
Sbjct: 111 SRAGNDFS-------------ESSSFCSSNVSGKVLDRFIDGEQQQEMSRLKNSYSQKNH 157

Query: 437 SANANRNGWRPPKVQSTAPGTPTGSFSELSGSH 535
           + N N  G RPP+VQ TAP +PT +++E    H
Sbjct: 158 AGNGNGGGRRPPRVQYTAPTSPTDNWAENGFGH 190


>emb|CAN81622.1| hypothetical protein VITISV_012437 [Vitis vinifera]
          Length = 884

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 52/169 (30%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
 Frame = +2

Query: 83  FSCDAIAFPNSTSNIPHQPSDYPVCNRSLNPERQQFSDRLGERAGSRKECLTQNFNSPGS 262
           +SC +    + +SN   QP      +R   PERQ    +  E    R     +   S GS
Sbjct: 94  WSCLSDQSRSPSSNTSVQPHS----SRRRTPERQSKGKQF-EAEVMRNAHGLERPGSAGS 148

Query: 263 SKLDYDXXXXXXXXXRFPRKCESARF--DHASNEVLDLYIDGEQKDSNTRTKVTSSPRKP 436
           S+   D               ES+ F   + S +VLD +IDGEQ+   +R K + S +  
Sbjct: 149 SRAGNDFS-------------ESSSFCSSNVSGKVLDRFIDGEQQQEMSRLKNSYSQKNH 195

Query: 437 SANANRNGWRPPKVQSTAPGTPTGSFSELSGSHSIKEMRDSSLHLITRN 583
           + N N  G RPP+VQ TAP +PT S  E   S    E   + L+  +R+
Sbjct: 196 AGNGNGGGRRPPRVQYTAPTSPTDSMKENPRSCLFGETVGTRLYFSSRD 244


>ref|XP_002275708.2| PREDICTED: uncharacterized protein LOC100241537 [Vitis vinifera]
          Length = 926

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
 Frame = +2

Query: 326 ESARF--DHASNEVLDLYIDGEQKDSNTRTKVTSSPRKPSANANRNGWRPPKVQSTAPGT 499
           ES+ F   + S +VLD +IDGEQ+   +R K + S +  + N N  G RPP+VQ TAP +
Sbjct: 131 ESSSFCSSNVSGKVLDRFIDGEQQQEMSRLKNSYSQKNHAGNGNGGGRRPPRVQYTAPTS 190

Query: 500 PTGSFSELSGSHSIKEMRDSSLHLITRN 583
           PT S  E   S    E   + L+  +R+
Sbjct: 191 PTDSMKENPRSCLFGETVGTRLYFSSRD 218


>ref|XP_003536786.1| PREDICTED: uncharacterized protein LOC100780589 [Glycine max]
          Length = 935

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/78 (38%), Positives = 45/78 (57%)
 Frame = +2

Query: 350 SNEVLDLYIDGEQKDSNTRTKVTSSPRKPSANANRNGWRPPKVQSTAPGTPTGSFSELSG 529
           S++++D YIDGEQ    +R K  +S R  S + N    RPPKVQ TAP +PT    +   
Sbjct: 141 SSKIVDRYIDGEQHPEESRPK-NNSQRSNSRHGNYGVKRPPKVQLTAPNSPTHGVKDKPR 199

Query: 530 SHSIKEMRDSSLHLITRN 583
           +HS +E + + L   +R+
Sbjct: 200 THSFREAKATRLRFSSRD 217


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