BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023169
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]           80   2e-13
gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa]               75   6e-12
gb|ABO26299.1| polyprotein [Nicotiana tabacum]                         72   4e-11
emb|CAL69016.1| pol domain [Agave tequilana]                           71   1e-10
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]    69   5e-10

>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/56 (66%), Positives = 45/56 (80%)
 Frame = +1

Query: 1   RMKHIDVHYHFVRDVIEDSDISLLKVGTKDNPADMLMKVVTGVKFQDCLGLLQILR 168
           R KHIDV YH+VR++IE  D+ L K+ TKDNP+DML KVV+ VKFQ CL L+QILR
Sbjct: 240 RTKHIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLTKVVSEVKFQHCLKLIQILR 295


>gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa]
          Length = 353

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 32/51 (62%), Positives = 41/51 (80%)
 Frame = +1

Query: 1   RMKHIDVHYHFVRDVIEDSDISLLKVGTKDNPADMLMKVVTGVKFQDCLGL 153
           R KHIDV +HFVR+++++ DI L K+GT DNPADML K V+G+KFQ CL L
Sbjct: 48  RTKHIDVRFHFVREIVDEGDILLQKIGTADNPADMLTKCVSGIKFQHCLDL 98


>gb|ABO26299.1| polyprotein [Nicotiana tabacum]
          Length = 57

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/55 (58%), Positives = 42/55 (76%)
 Frame = +1

Query: 1   RMKHIDVHYHFVRDVIEDSDISLLKVGTKDNPADMLMKVVTGVKFQDCLGLLQIL 165
           R KHIDV YHFVR++IE+  +++ K+ T +NPADML KVV  VKFQ CL L+ I+
Sbjct: 1   RTKHIDVRYHFVREIIEEGGVTVKKIHTTENPADMLTKVVIAVKFQHCLDLINIV 55


>emb|CAL69016.1| pol domain [Agave tequilana]
          Length = 52

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/50 (64%), Positives = 41/50 (82%)
 Frame = +1

Query: 19  VHYHFVRDVIEDSDISLLKVGTKDNPADMLMKVVTGVKFQDCLGLLQILR 168
           V YHFVR+++E+ DI+LLK+ T +NPADML KVV+GVKF  C  LLQIL+
Sbjct: 1   VRYHFVREILEEDDINLLKIHTSENPADMLTKVVSGVKFAHCKDLLQILQ 50


>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
          Length = 939

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = +1

Query: 1    RMKHIDVHYHFVRDVIEDSDISLLKVGTKDNPADMLMKVVTGVKFQDCLGLLQI 162
            R KHIDV +HF+RD+ E   +++ K+ TKDNPADML K ++ VKF+ CL L+ +
Sbjct: 883  RTKHIDVRFHFIRDIAEQGLVNVSKISTKDNPADMLTKPISKVKFKQCLNLINV 936