BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023154
         (1734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi...   690   0.0  
ref|XP_002529915.1| pentatricopeptide repeat-containing protein,...   658   0.0  
ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containi...   647   0.0  
ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containi...   647   0.0  
ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containi...   647   0.0  

>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Vitis vinifera]
            gi|297744374|emb|CBI37344.3| unnamed protein product
            [Vitis vinifera]
          Length = 497

 Score =  690 bits (1781), Expect = 0.0
 Identities = 335/412 (81%), Positives = 370/412 (89%)
 Frame = +2

Query: 212  IASKKAVSVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERVAALRWESALKVFELL 391
            IASKKA+SVILRREATKA+IEKKRGP NSKKLLPRTVLEALHER+ ALRWESALKVFELL
Sbjct: 69   IASKKAISVILRREATKAVIEKKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELL 128

Query: 392  REQLWYRPNPGVYIKLMVMLGKCQQPEKAHVLFQSMIEEGCIVNHESYTALASAYSRSGF 571
            REQLWYRPN G+YIKL+VMLGKC+QPEKAH LF +MI+EGC+VNHE+YTAL SAYSRSG 
Sbjct: 129  REQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSRSGL 188

Query: 572  FDKAFSLLNQMKNTPGCEPDIFTYTILIKSCLQVFAFDRVQTLLSDMADQGIKPNTVTYN 751
            FDKAFSLL +MKNTP C+PD+ TY++LIKSCLQV AFD+V  LLSDMA+QGIKPNTVTYN
Sbjct: 189  FDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPNTVTYN 248

Query: 752  TLIDAYGKAGRYAEMESTLMEMLRERECEPDVWTMNATLRAFGGSKQIETMESCYEKFQK 931
            TLIDAYGKA R+AEMESTL+EMLRE +CEPDVWTMN+TLRAFG S QIETME CYEKFQ 
Sbjct: 249  TLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQS 308

Query: 932  AGIRPDIKTFNVLLDSYGKAGSYEKMSAVMEYMQKYYFSWTIVTYNVVIDAFGRAGDLKQ 1111
            AGI P+IKTFN+LLDSYGKA  YEKMSAVMEYMQKY+FSWTIVTYNVVIDAFGRAGDLKQ
Sbjct: 309  AGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGRAGDLKQ 368

Query: 1112 MEYLFRLMRSEKIKPNCITLCSLIRAYGRVGSKDKIESVLRIIENSDVTLDTAFFNCLVD 1291
            MEYLFRLMRSE+IKP+C+TLCSL+RAYGR G  +KI  VLR IENSDV LD  FFNCLVD
Sbjct: 369  MEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDIVFFNCLVD 428

Query: 1292 AYGRMGCLAEMKEALEMMTQRGCIPDKITYSTMIKAYASNGITSRAKELRDI 1447
            AYGR+GC AEMK  LEMM ++GC PDKITY TMIKAY   G+TS AKEL+ +
Sbjct: 429  AYGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIGGMTSCAKELQGL 480


>ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223530592|gb|EEF32469.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 636

 Score =  658 bits (1697), Expect = 0.0
 Identities = 319/420 (75%), Positives = 363/420 (86%)
 Frame = +2

Query: 212  IASKKAVSVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERVAALRWESALKVFELL 391
            IAS+KA+SVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHER+ ALRWESALKVFELL
Sbjct: 86   IASRKAISVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERITALRWESALKVFELL 145

Query: 392  REQLWYRPNPGVYIKLMVMLGKCQQPEKAHVLFQSMIEEGCIVNHESYTALASAYSRSGF 571
            REQ+WYRP  G+YIKL+VMLGKC+QPEKAH LFQ+MI EGC V+HESYTAL SAY RSG 
Sbjct: 146  REQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGRSGL 205

Query: 572  FDKAFSLLNQMKNTPGCEPDIFTYTILIKSCLQVFAFDRVQTLLSDMADQGIKPNTVTYN 751
             DKAFSLL +MK  P C+PD+ TY+ILIKSC+QVFAFD+ +TLLS+M   GI PNT+TYN
Sbjct: 206  LDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNTITYN 265

Query: 752  TLIDAYGKAGRYAEMESTLMEMLRERECEPDVWTMNATLRAFGGSKQIETMESCYEKFQK 931
            TLIDAYGKA  + EME+TL++ML ++ CEPDVWTMN+TLRAFG S QIETME CYEKFQ 
Sbjct: 266  TLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEKFQG 325

Query: 932  AGIRPDIKTFNVLLDSYGKAGSYEKMSAVMEYMQKYYFSWTIVTYNVVIDAFGRAGDLKQ 1111
            AGI P I TFNVLLDSYGKAG Y+KMSAVMEYMQKY++SWTI+TYN+VIDAFGRAGDLKQ
Sbjct: 326  AGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAGDLKQ 385

Query: 1112 MEYLFRLMRSEKIKPNCITLCSLIRAYGRVGSKDKIESVLRIIENSDVTLDTAFFNCLVD 1291
            MEYLFRLMRSE+IKP+C+TLCSL+RAYG+    +KIE VLR IENSD+TLDT FFNCLVD
Sbjct: 386  MEYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFNCLVD 445

Query: 1292 AYGRMGCLAEMKEALEMMTQRGCIPDKITYSTMIKAYASNGITSRAKELRDIANKGGSKL 1471
            AYGRMGC AEMK  L +M Q+G  PDKITY TMIKAY+S G+T   KEL+D+   G  K+
Sbjct: 446  AYGRMGCFAEMKGVLILMEQKGYRPDKITYRTMIKAYSSKGMTKHVKELQDLEAAGVRKV 505


>ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Cucumis sativus]
          Length = 511

 Score =  647 bits (1669), Expect = 0.0
 Identities = 310/423 (73%), Positives = 369/423 (87%), Gaps = 1/423 (0%)
 Frame = +2

Query: 212  IASKKAVSVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERVAALRWESALKVFELL 391
            IAS+KA+SVILRREATKA+IE+KRGP NSKKLLPRTVLEALH+R+  LRWESALKVFELL
Sbjct: 86   IASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHDRITTLRWESALKVFELL 145

Query: 392  REQLWYRPNPGVYIKLMVMLGKCQQPEKAHVLFQSMIEEGCIVNHESYTALASAYSRSGF 571
            REQLWYRP  G+YIKL+VMLGKC+Q EKA+ LFQ MIEEGC V+HESYTAL SAYSRSG 
Sbjct: 146  REQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGL 205

Query: 572  FDKAFSLLNQMKNTPGCEPDIFTYTILIKSCLQVFAFDRVQTLLSDMADQGIKPNTVTYN 751
             D+AFS+LN+MKN+P C+PD+ TY+ILIKSCLQVFAF++ QTLLSDM  +GIKPNT+TYN
Sbjct: 206  LDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYN 265

Query: 752  TLIDAYGKAGRYAEMESTLMEMLRERECEPDVWTMNATLRAFGGSKQIETMESCYEKFQK 931
            T IDAYGKA  +AEMES L++ML +  C+PDVWTMN+TLRAFG S Q+ETME CYEKFQ+
Sbjct: 266  TFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQE 325

Query: 932  AGIRPDIKTFNVLLDSYGKAGSYEKMSAVMEYMQKYYFSWTIVTYNVVIDAFGRAGDLKQ 1111
            AGI+P I+TFN+LLDSYGKA SYEKMSAVMEYMQKY++SWTIVTYN+VIDAFGRAG+LKQ
Sbjct: 326  AGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQ 385

Query: 1112 MEYLFRLMRSEKIKPNCITLCSLIRAYGRVGSKDKIESVLRIIENSDVTLDTAFFNCLVD 1291
            ME+LFRLMRSE+IKP+C+TLCSL+RAYG+ G ++KI+SVL ++ENSD+ LDT F+NCLVD
Sbjct: 386  MEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVD 445

Query: 1292 AYGRMGCLAEMKEALEMMTQRGCIPDKITYSTMIKAYASNGITSRAKELRD-IANKGGSK 1468
            AYGR+ C AEMK+ L MM QRGC PDK TY TM +AY+  G+ + AKE+++ I     SK
Sbjct: 446  AYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITTAEPSK 505

Query: 1469 LTR 1477
             TR
Sbjct: 506  RTR 508


>ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Cucumis sativus]
          Length = 456

 Score =  647 bits (1669), Expect = 0.0
 Identities = 310/423 (73%), Positives = 369/423 (87%), Gaps = 1/423 (0%)
 Frame = +2

Query: 212  IASKKAVSVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERVAALRWESALKVFELL 391
            IAS+KA+SVILRREATKA+IE+KRGP NSKKLLPRTVLEALH+R+  LRWESALKVFELL
Sbjct: 31   IASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHDRITTLRWESALKVFELL 90

Query: 392  REQLWYRPNPGVYIKLMVMLGKCQQPEKAHVLFQSMIEEGCIVNHESYTALASAYSRSGF 571
            REQLWYRP  G+YIKL+VMLGKC+Q EKA+ LFQ MIEEGC V+HESYTAL SAYSRSG 
Sbjct: 91   REQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGL 150

Query: 572  FDKAFSLLNQMKNTPGCEPDIFTYTILIKSCLQVFAFDRVQTLLSDMADQGIKPNTVTYN 751
             D+AFS+LN+MKN+P C+PD+ TY+ILIKSCLQVFAF++ QTLLSDM  +GIKPNT+TYN
Sbjct: 151  LDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYN 210

Query: 752  TLIDAYGKAGRYAEMESTLMEMLRERECEPDVWTMNATLRAFGGSKQIETMESCYEKFQK 931
            T IDAYGKA  +AEMES L++ML +  C+PDVWTMN+TLRAFG S Q+ETME CYEKFQ+
Sbjct: 211  TFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQE 270

Query: 932  AGIRPDIKTFNVLLDSYGKAGSYEKMSAVMEYMQKYYFSWTIVTYNVVIDAFGRAGDLKQ 1111
            AGI+P I+TFN+LLDSYGKA SYEKMSAVMEYMQKY++SWTIVTYN+VIDAFGRAG+LKQ
Sbjct: 271  AGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQ 330

Query: 1112 MEYLFRLMRSEKIKPNCITLCSLIRAYGRVGSKDKIESVLRIIENSDVTLDTAFFNCLVD 1291
            ME+LFRLMRSE+IKP+C+TLCSL+RAYG+ G ++KI+SVL ++ENSD+ LDT F+NCLVD
Sbjct: 331  MEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVD 390

Query: 1292 AYGRMGCLAEMKEALEMMTQRGCIPDKITYSTMIKAYASNGITSRAKELRD-IANKGGSK 1468
            AYGR+ C AEMK+ L MM QRGC PDK TY TM +AY+  G+ + AKE+++ I     SK
Sbjct: 391  AYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITTAEPSK 450

Query: 1469 LTR 1477
             TR
Sbjct: 451  RTR 453


>ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Glycine max]
          Length = 515

 Score =  647 bits (1669), Expect = 0.0
 Identities = 310/418 (74%), Positives = 365/418 (87%), Gaps = 6/418 (1%)
 Frame = +2

Query: 212  IASKKAVSVILRREATKAIIEK------KRGPTNSKKLLPRTVLEALHERVAALRWESAL 373
            +AS+KAVSVIL REATKA+I+K      K+GP NSKKLLPRTVLEALHERV ALRWESAL
Sbjct: 82   VASQKAVSVILWREATKAMIDKSGGGRKKKGPINSKKLLPRTVLEALHERVTALRWESAL 141

Query: 374  KVFELLREQLWYRPNPGVYIKLMVMLGKCQQPEKAHVLFQSMIEEGCIVNHESYTALASA 553
            KVFELL EQ+WY+P+ GVYIKL+VMLGKC+QPEKAH LFQ+M++EGC+++ ESYTAL SA
Sbjct: 142  KVFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTALLSA 201

Query: 554  YSRSGFFDKAFSLLNQMKNTPGCEPDIFTYTILIKSCLQVFAFDRVQTLLSDMADQGIKP 733
            YSRSG  DKAFSLL +MKNTPGC+PD+ TY+IL+KSCLQVFAFD++Q+LLSDM ++GIKP
Sbjct: 202  YSRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMTNRGIKP 261

Query: 734  NTVTYNTLIDAYGKAGRYAEMESTLMEMLRERECEPDVWTMNATLRAFGGSKQIETMESC 913
            NTVTYNTLIDAYGKA +++EMES L+EML +R C+PDVWTMN+TLRAFG   QIETME C
Sbjct: 262  NTVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNSTLRAFGNIGQIETMEKC 321

Query: 914  YEKFQKAGIRPDIKTFNVLLDSYGKAGSYEKMSAVMEYMQKYYFSWTIVTYNVVIDAFGR 1093
            YEKFQ AGI+P+++TFN+LLDSYGKA  Y+KMSAVMEYMQKY++SWTIVT+N+VIDAFG+
Sbjct: 322  YEKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQKYHYSWTIVTFNIVIDAFGK 381

Query: 1094 AGDLKQMEYLFRLMRSEKIKPNCITLCSLIRAYGRVGSKDKIESVLRIIENSDVTLDTAF 1273
            AGDLKQMEYLFRLMRSE+IKP+C+TLCSL+RAY R G  +KI  VLR +ENSDV LDT F
Sbjct: 382  AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVF 441

Query: 1274 FNCLVDAYGRMGCLAEMKEALEMMTQRGCIPDKITYSTMIKAYASNGITSRAKELRDI 1447
            FNCLVDAY R+GCLAEMK  LEMM Q GC PD +TY TMIK Y   G+ S AKELR++
Sbjct: 442  FNCLVDAYARLGCLAEMKGVLEMMKQNGCKPDIVTYRTMIKTYTYKGMDSHAKELREL 499