BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023133
         (1201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17741.3| unnamed protein product [Vitis vinifera]              456   e-126
ref|XP_002268085.2| PREDICTED: crossover junction endonuclease M...   441   e-121
ref|XP_002303906.1| predicted protein [Populus trichocarpa] gi|2...   432   e-119
ref|XP_003538223.1| PREDICTED: crossover junction endonuclease M...   429   e-118
ref|XP_003598875.1| Crossover junction endonuclease MUS81 [Medic...   423   e-116

>emb|CBI17741.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score =  456 bits (1174), Expect = e-126
 Identities = 246/403 (61%), Positives = 303/403 (75%), Gaps = 5/403 (1%)
 Frame = +1

Query: 4    MGYSLEQIRTAFAKVSQDTLSKDVSSLLPAVIHHLQKDQVDVLLSVCRTSGKD---SQAT 174
            MGY+ E++  AF +V++ +  K +SSL PAV+  L+++QV    S  + + ++   S AT
Sbjct: 272  MGYTREEVLRAFTEVAETSQKKGMSSLWPAVLCCLRENQVYGFHSESQANLREDCLSTAT 331

Query: 175  SNTYNVKNIGRACSFVEENGRISR--GGARHGPDSLNSADSGQSSFTLQACSSSGYTVHK 348
            ++T+    I      + EN ++    GG    P S +  DS QSSFTL+ACSSS Y V K
Sbjct: 332  THTF----IDGQVDLISENSQMDSACGGPLLMPKSSHPVDSVQSSFTLRACSSSDYPVQK 387

Query: 349  SSPHDTVHTNANVLMVPPLRHEERFGDVYDVILILDDREQFINSNKGHRSRKIVENIRTE 528
             +  D +  N NVL +PPL   ERF DVY+V+LILDDREQF  + +G RSRKI+ENI T+
Sbjct: 388  LNS-DGLKVNMNVLTMPPLLVGERFEDVYEVVLILDDREQF--TTQGSRSRKIIENICTQ 444

Query: 529  FKIQIEVRRLPVGDAIWIARHKQLEDEYVLDFIVERKEVEDLRCSIRDNRYKDQKLRILR 708
            FKIQIEVRRLPVGD IW+ARHK L+ EYVLDFIVERK V DLRCSIRDNRYKDQKLR+LR
Sbjct: 445  FKIQIEVRRLPVGDGIWVARHKHLDSEYVLDFIVERKNVNDLRCSIRDNRYKDQKLRLLR 504

Query: 709  CGLQKLIYLVEGDPTVSEAAEAIKTACFTTEILEGFDVQRTNGLGDTFRKYGHLTLAITN 888
            CGL+KLIYLVEGDP  SEAAE+IKTACFTTEILEGFDVQRT+GL DT RKYG+LT AI +
Sbjct: 505  CGLKKLIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTSGLADTLRKYGYLTQAIAH 564

Query: 889  HYGTLLSSDNIRNTRTCPSFDDFLKKCEDLEKVTVSDVFAIQLMQVPQVTEEIALAVLGC 1068
             Y   +  D ++NT  CP F++F++ C  L+K+TVSDVFAIQLMQVPQVTEE+A+ VL  
Sbjct: 565  SYRLQVIEDKLKNTSVCPPFNEFIRSCNGLDKMTVSDVFAIQLMQVPQVTEEVAVVVLDL 624

Query: 1069 YPTPVSLARAYSLLDGDIRSQEEMLMTQSNNMISRVASKNIFK 1197
            YPT +SLARAYSLLDGDI +QEEML  QSNNM++ VAS+NIFK
Sbjct: 625  YPTLLSLARAYSLLDGDILAQEEMLRKQSNNMVNAVASRNIFK 667


>ref|XP_002268085.2| PREDICTED: crossover junction endonuclease MUS81-like [Vitis
            vinifera]
          Length = 702

 Score =  441 bits (1133), Expect = e-121
 Identities = 246/433 (56%), Positives = 303/433 (69%), Gaps = 35/433 (8%)
 Frame = +1

Query: 4    MGYSLEQIRTAFAKVSQDTLSKDVSSLLPAVIHHLQKDQVDVLLSVCRTSGKD---SQAT 174
            MGY+ E++  AF +V++ +  K +SSL PAV+  L+++QV    S  + + ++   S AT
Sbjct: 272  MGYTREEVLRAFTEVAETSQKKGMSSLWPAVLCCLRENQVYGFHSESQANLREDCLSTAT 331

Query: 175  SNTYNVKNIGRACSFVEENGRISR--GGARHGPDSLNSADSGQSSFTLQACSSS------ 330
            ++T+    I      + EN ++    GG    P S +  DS QSSFTL+ACSSS      
Sbjct: 332  THTF----IDGQVDLISENSQMDSACGGPLLMPKSSHPVDSVQSSFTLRACSSSILYGGC 387

Query: 331  ------------------------GYTVHKSSPHDTVHTNANVLMVPPLRHEERFGDVYD 438
                                     Y V K +  D +  N NVL +PPL   ERF DVY+
Sbjct: 388  QLLLDPDLLFTIYLHNSCKSGYSDDYPVQKLNS-DGLKVNMNVLTMPPLLVGERFEDVYE 446

Query: 439  VILILDDREQFINSNKGHRSRKIVENIRTEFKIQIEVRRLPVGDAIWIARHKQLEDEYVL 618
            V+LILDDREQF  + +G RSRKI+ENI T+FKIQIEVRRLPVGD IW+ARHK L+ EYVL
Sbjct: 447  VVLILDDREQF--TTQGSRSRKIIENICTQFKIQIEVRRLPVGDGIWVARHKHLDSEYVL 504

Query: 619  DFIVERKEVEDLRCSIRDNRYKDQKLRILRCGLQKLIYLVEGDPTVSEAAEAIKTACFTT 798
            DFIVERK V DLRCSIRDNRYKDQKLR+LRCGL+KLIYLVEGDP  SEAAE+IKTACFTT
Sbjct: 505  DFIVERKNVNDLRCSIRDNRYKDQKLRLLRCGLKKLIYLVEGDPNSSEAAESIKTACFTT 564

Query: 799  EILEGFDVQRTNGLGDTFRKYGHLTLAITNHYGTLLSSDNIRNTRTCPSFDDFLKKCEDL 978
            EILEGFDVQRT+GL DT RKYG+LT AI + Y   +  D ++NT  CP F++F++ C  L
Sbjct: 565  EILEGFDVQRTSGLADTLRKYGYLTQAIAHSYRLQVIEDKLKNTSVCPPFNEFIRSCNGL 624

Query: 979  EKVTVSDVFAIQLMQVPQVTEEIALAVLGCYPTPVSLARAYSLLDGDIRSQEEMLMTQSN 1158
            +K+TVSDVFAIQLMQVPQVTEE+A+ VL  YPT +SLARAYSLLDGDI +QEEML  QSN
Sbjct: 625  DKMTVSDVFAIQLMQVPQVTEEVAVVVLDLYPTLLSLARAYSLLDGDILAQEEMLRKQSN 684

Query: 1159 NMISRVASKNIFK 1197
            NM++ VAS+NIFK
Sbjct: 685  NMVNAVASRNIFK 697


>ref|XP_002303906.1| predicted protein [Populus trichocarpa] gi|222841338|gb|EEE78885.1|
            predicted protein [Populus trichocarpa]
          Length = 699

 Score =  432 bits (1112), Expect = e-119
 Identities = 243/426 (57%), Positives = 305/426 (71%), Gaps = 28/426 (6%)
 Frame = +1

Query: 4    MGYSLEQIRTAFAKVSQDTLSKDVSSLLPAVIHHLQKDQVDVLLSVCRTSGKDSQATSNT 183
            MGYS E++  AF++VS+ +  K++S L PAV+ HL++D +  + S  +T  +D ++TS  
Sbjct: 273  MGYSKEKVLLAFSEVSETSQYKEISLLWPAVLCHLREDLIYGVHSEPQTLTEDFRSTSTA 332

Query: 184  Y-------------------NVKNIG--RACSF-------VEENGRISRGGARHGPDSLN 279
                                NV+ +   R C          + N   S    R+ P+ L 
Sbjct: 333  CTFSNGNKHTFLNAIISPVENVEKVSYPRLCKHPGQVDLATKSNQMGSNCDGRNMPN-LT 391

Query: 280  SADSGQSSFTLQACSSSGYTVHKSSPHDTVHTNANVLMVPPLRHEERFGDVYDVILILDD 459
            SA S  SSF+++ACSSS +++ KSS  D + TN NVL +PPL   ERF DVY+VILILDD
Sbjct: 392  SACSTSSSFSMRACSSSEHSMKKSSS-DRLDTNMNVLSLPPLSLGERFEDVYEVILILDD 450

Query: 460  REQFINSNKGHRSRKIVENIRTEFKIQIEVRRLPVGDAIWIARHKQLEDEYVLDFIVERK 639
            REQF  + +  R RK++E I  E KI+I+VRRLPVGD IWIA HK L  EYVLDFIVERK
Sbjct: 451  REQF--AIQCSRGRKLIEFICKEHKIKIQVRRLPVGDGIWIACHKYLLSEYVLDFIVERK 508

Query: 640  EVEDLRCSIRDNRYKDQKLRILRCGLQKLIYLVEGDPTVSEAAEAIKTACFTTEILEGFD 819
            +V+DLR SIRDNRY+DQKLR+LRCGL+KLIYLVEGDP  SEAAE+IKTACFTTEILEGFD
Sbjct: 509  KVDDLRSSIRDNRYRDQKLRLLRCGLKKLIYLVEGDPNSSEAAESIKTACFTTEILEGFD 568

Query: 820  VQRTNGLGDTFRKYGHLTLAITNHYGTLLSSDNIRNTRTCPSFDDFLKKCEDLEKVTVSD 999
            VQRTN L DT +KY HLT +IT +Y  LL  D  ++TR CPSFD+F+K+C+DLEK+TVSD
Sbjct: 569  VQRTNSLRDTLKKYAHLTQSITQYYSLLLPEDQSKSTRVCPSFDEFIKRCQDLEKMTVSD 628

Query: 1000 VFAIQLMQVPQVTEEIALAVLGCYPTPVSLARAYSLLDGDIRSQEEMLMTQSNNMISRVA 1179
            VFAIQLMQVPQVTEE A+AVL  YPT +SLARAYSLLDGD+ +QE+ML  QS+N +S VA
Sbjct: 629  VFAIQLMQVPQVTEETAVAVLNLYPTLLSLARAYSLLDGDVSAQEDMLRKQSSNAVSAVA 688

Query: 1180 SKNIFK 1197
            S+NIF+
Sbjct: 689  SRNIFQ 694


>ref|XP_003538223.1| PREDICTED: crossover junction endonuclease MUS81-like [Glycine max]
          Length = 643

 Score =  429 bits (1102), Expect = e-118
 Identities = 240/403 (59%), Positives = 291/403 (72%), Gaps = 4/403 (0%)
 Frame = +1

Query: 4    MGYSLEQIRTAFAKVSQDTLSKDVSSLLPAVIHHLQKDQVDVLLSVCRTSG----KDSQA 171
            MGYS E I  AF +VS+   +KDVSSL PAV+ HL+++QV       + S     KDS+A
Sbjct: 269  MGYSKEHIIGAFTEVSKSHPNKDVSSLWPAVLCHLREEQVYGSQPESQRSRDLIVKDSRA 328

Query: 172  TSNTYNVKNIGRACSFVEENGRISRGGARHGPDSLNSADSGQSSFTLQACSSSGYTVHKS 351
             S   +V+NI   CS                             FTL+ACSS+   +   
Sbjct: 329  VS--LHVRNI---CSH------------------------DIPPFTLRACSSADRPMQNP 359

Query: 352  SPHDTVHTNANVLMVPPLRHEERFGDVYDVILILDDREQFINSNKGHRSRKIVENIRTEF 531
            +  + V +  N+L VPPL   ERF D YDV+LILDDREQF  + +G RSRKI+ENIR++F
Sbjct: 360  NKDELV-SKLNILNVPPLSLGERFEDAYDVVLILDDREQF--ATQGSRSRKIIENIRSQF 416

Query: 532  KIQIEVRRLPVGDAIWIARHKQLEDEYVLDFIVERKEVEDLRCSIRDNRYKDQKLRILRC 711
            KIQIEVRRLPVGD IWIARHK L  EYVLDFIVERK+  DL  SIRDNRYKDQKLR+LRC
Sbjct: 417  KIQIEVRRLPVGDGIWIARHKTLNSEYVLDFIVERKKTNDLCSSIRDNRYKDQKLRLLRC 476

Query: 712  GLQKLIYLVEGDPTVSEAAEAIKTACFTTEILEGFDVQRTNGLGDTFRKYGHLTLAITNH 891
            GL+KLIYLVEGDP  SEAAE+IKTACFTTEILEGFDVQRT+GLGDT RKYG+LT AI+ +
Sbjct: 477  GLKKLIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTSGLGDTLRKYGYLTQAISQY 536

Query: 892  YGTLLSSDNIRNTRTCPSFDDFLKKCEDLEKVTVSDVFAIQLMQVPQVTEEIALAVLGCY 1071
            Y + +  DN++ +  CP FD+F+K+C+DLEK TVSDVFA+QLMQVPQVTEE+A+AVL  +
Sbjct: 537  YKSEIFEDNVKGSGACPPFDEFIKRCQDLEKTTVSDVFAMQLMQVPQVTEEVAMAVLDLF 596

Query: 1072 PTPVSLARAYSLLDGDIRSQEEMLMTQSNNMISRVASKNIFKF 1200
            PT  SLARAYSLLDGD  +QEEML  QSN++I+ VAS+NIF+F
Sbjct: 597  PTLFSLARAYSLLDGDGCAQEEMLRRQSNSVINAVASRNIFQF 639


>ref|XP_003598875.1| Crossover junction endonuclease MUS81 [Medicago truncatula]
            gi|355487923|gb|AES69126.1| Crossover junction
            endonuclease MUS81 [Medicago truncatula]
          Length = 735

 Score =  423 bits (1087), Expect = e-116
 Identities = 241/420 (57%), Positives = 296/420 (70%), Gaps = 21/420 (5%)
 Frame = +1

Query: 1    HMGYSLEQIRTAFAKVSQDTLSKDVSSLLPAVIHHLQKDQVDVLLSVCRTSGKDSQATSN 180
            +MGYS EQI +AF +VS+   +KDVSSL PAV+  L+++QV         S  +SQ   N
Sbjct: 326  NMGYSKEQIISAFKEVSRSHPNKDVSSLWPAVLCQLREEQV-------YGSQPESQILMN 378

Query: 181  TYNVKNIGRACSFVEENGRISRG-GARHGPDSLNSADSGQSSFTLQACSSSGYTVHKSSP 357
               V N  +        G+ SR   +  G +  N        F+++ACSS+G T+ K + 
Sbjct: 379  ANTVVNDPKG-----PIGKQSRTLSSSFGGNVANLCSPDIPPFSMRACSSAGNTIQKPNK 433

Query: 358  HDTVHTNANVLMVPPLRHEERFGDVYDVILILDDREQFINSNKGHRSRKIVENIRTEFKI 537
             D + +  N+L VPPL   ERF D Y+VILILDDREQF  + KG RSRKI+ENI + FKI
Sbjct: 434  -DEIKSKMNILSVPPLSFGERFEDAYEVILILDDREQF--ATKGSRSRKIIENICSNFKI 490

Query: 538  QIEVRRLPVGDAIWIARHKQLEDEYVLDFIVERKEVEDLRCSIRDNRYKDQKLRI----- 702
            QIEVRRLPVGD IWIARHK L  EYVLDFIVERK+++DLR SIRDNRYKDQKLR+     
Sbjct: 491  QIEVRRLPVGDGIWIARHKTLGSEYVLDFIVERKKIDDLRSSIRDNRYKDQKLRLVVSIP 550

Query: 703  --LRCGLQKLIYLVEGDPTVSEAAEAIKTACFTTEILEGFDVQRTNGLGDTFRKYGHLTL 876
              +RCGL+KLIYLVEGDP  SEAAE+IKTACFTTEILEGFDVQRT+GLGDT RKYGHLT 
Sbjct: 551  SKIRCGLKKLIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTSGLGDTLRKYGHLTQ 610

Query: 877  AITNHYGTLLSSDNIRNTRTCPSFDDFLKKCEDLEKVTVSDVFAIQLMQ----------- 1023
            AI  +Y +    DN + +  CP +D+F+++C+DLEK+TVSDVFAIQLMQ           
Sbjct: 611  AIYQYYKSDFFEDNNKCSAICPPYDEFVRRCQDLEKMTVSDVFAIQLMQVPTISKLILNR 670

Query: 1024 --VPQVTEEIALAVLGCYPTPVSLARAYSLLDGDIRSQEEMLMTQSNNMISRVASKNIFK 1197
              VPQVTEEIA+AVL  YPT +SLARAYSLLDG+ R+QE+ML  QSNN+I+  AS+NIF+
Sbjct: 671  YLVPQVTEEIAMAVLDLYPTLMSLARAYSLLDGNSRTQEQMLQRQSNNVINGSASRNIFQ 730