BLASTX nr result

ID: Cimicifuga21_contig00023115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023115
         (1291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145895.1| PREDICTED: 28S ribosomal protein S9, mitocho...   375   e-101
ref|XP_002274146.1| PREDICTED: 28S ribosomal protein S9, mitocho...   373   e-101
ref|XP_002513668.1| ribosomal protein S9, putative [Ricinus comm...   372   e-100
ref|XP_003538940.1| PREDICTED: uncharacterized protein LOC100797...   342   2e-91
ref|XP_003540306.1| PREDICTED: uncharacterized protein LOC100796...   339   8e-91

>ref|XP_004145895.1| PREDICTED: 28S ribosomal protein S9, mitochondrial-like [Cucumis
            sativus]
          Length = 405

 Score =  375 bits (964), Expect = e-101
 Identities = 200/371 (53%), Positives = 257/371 (69%), Gaps = 13/371 (3%)
 Frame = +3

Query: 216  PNFNFI---FQTSRSFSSNRKNSGDDFTKPPSGSSSWKLSPDNDEDGGSIFGEDSGDFSG 386
            P+F  +   F T+ + S+N  NSG   +K    S+ WK+S +NDE+   +F +++ +  G
Sbjct: 27   PSFQLLPRFFSTNNNGSNNNNNSG---SKDQPTSNIWKISQENDENFDQLFTQEADNLDG 83

Query: 387  FADENGSFDDKPVKASVGRSNINVVESWGKDSSTSSDIFADIDKEFTSTKSXXXXXXXEW 566
             A+E+          S  R + + V S   D     D+FA ++KE    K        EW
Sbjct: 84   IAEED----------SAPRKDDSWVTSKSGDQDAEGDLFASLEKEVQGNKDGVSHD--EW 131

Query: 567  ETAEGYKPWSFEEEEKSEVFDI----------GDGIEGFPSIIDEITEREKSEANLQLEK 716
               + +  WS  EEEKS+VF+I          GDG++   +   E   + + E  ++LEK
Sbjct: 132  PMEKKFDVWSLVEEEKSDVFNIEEGEVKIGEFGDGLKEVDTESSEDARKLEKENAMKLEK 191

Query: 717  EEKELSVQLKGPNRAFGDLIAASGITDAMLDSLIALKDLAAVDGLPPLSEIEDIRLAKNE 896
            EE+EL+  LKGPNRAFGDLIAASG TD M+DSL+ALKDL  ++GLPPL+EIED+R  KN 
Sbjct: 192  EEQELTAVLKGPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLTEIEDMRYEKNT 251

Query: 897  MKNTRAEIERQKQEEISKSRVRRVDDKGRAYGTGRRKCSVARVFIQPGEGKFHINNKEFD 1076
             K++RAEIERQKQEE++K+RVR+VD+KGRAYGTGRRKCS+ARV+IQPG GKF +N+KEFD
Sbjct: 252  RKSSRAEIERQKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGNGKFVVNDKEFD 311

Query: 1077 VYFPILDHRADLLRPFSETKTLGLWDVRCTVKGGGTSGQVGAIRLGISRALQNWEPGLRP 1256
            VYFP+LD RA LL+PF+ETKTLGLWDV CTVKGGGT+GQVGAI+LGISRALQNWEP  RP
Sbjct: 312  VYFPMLDSRAILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISRALQNWEPEFRP 371

Query: 1257 SLRAVGFLTRD 1289
             LRA GFLTRD
Sbjct: 372  PLRASGFLTRD 382


>ref|XP_002274146.1| PREDICTED: 28S ribosomal protein S9, mitochondrial [Vitis vinifera]
            gi|147846771|emb|CAN80622.1| hypothetical protein
            VITISV_043432 [Vitis vinifera]
            gi|296084909|emb|CBI28318.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  373 bits (957), Expect = e-101
 Identities = 206/353 (58%), Positives = 238/353 (67%), Gaps = 1/353 (0%)
 Frame = +3

Query: 234  FQTSRSFSSNRKNSGDDFTKPPSGSSSWKLSPDNDEDGGSIFGEDSGDFSGFADENGSFD 413
            F   R FS+N  N+ D+ TK  S  +SWK+S + D +G SI G+++G  +G  DE G+  
Sbjct: 31   FTLPRFFSTNHNNN-DNNTKDRSTFNSWKISQEYDGNGDSIVGQEAGTLAGLTDEGGAAP 89

Query: 414  DKPVKASVGRSNINVVESWGKDSSTSSDIFADIDKEFTSTKSXXXXXXXEWETAEGYKPW 593
             +              ESW KDS                                   PW
Sbjct: 90   AED-------------ESWLKDS-----------------------------------PW 101

Query: 594  SFEEE-EKSEVFDIGDGIEGFPSIIDEITEREKSEANLQLEKEEKELSVQLKGPNRAFGD 770
            +FEEE EK  V D G  ++     +   T  E   +   LEKEE  LS  LKGPNRAFGD
Sbjct: 102  TFEEEREKGNVLDFGWELQEEVRAVGGETTIEGDGSKELLEKEESALSAVLKGPNRAFGD 161

Query: 771  LIAASGITDAMLDSLIALKDLAAVDGLPPLSEIEDIRLAKNEMKNTRAEIERQKQEEISK 950
            LIAASGITDAMLDSLIALKDL  V+GLPPLSEIEDIR  KN  K+TRAEIERQKQEE++K
Sbjct: 162  LIAASGITDAMLDSLIALKDLEGVEGLPPLSEIEDIRYEKNTRKSTRAEIERQKQEEVAK 221

Query: 951  SRVRRVDDKGRAYGTGRRKCSVARVFIQPGEGKFHINNKEFDVYFPILDHRADLLRPFSE 1130
            +RVR+VD+KGRAYGTGRRKCS+ARV++QPG+GKF IN+K+FDVYFP+LDHRA LLRPFSE
Sbjct: 222  ARVRQVDEKGRAYGTGRRKCSIARVWVQPGDGKFMINDKQFDVYFPMLDHRAALLRPFSE 281

Query: 1131 TKTLGLWDVRCTVKGGGTSGQVGAIRLGISRALQNWEPGLRPSLRAVGFLTRD 1289
            TKTLGLWDV CTVKGGG SGQVGAIRLGISRALQNWEPGLRP LR  GFLTRD
Sbjct: 282  TKTLGLWDVNCTVKGGGLSGQVGAIRLGISRALQNWEPGLRPQLREAGFLTRD 334


>ref|XP_002513668.1| ribosomal protein S9, putative [Ricinus communis]
            gi|223547576|gb|EEF49071.1| ribosomal protein S9,
            putative [Ricinus communis]
          Length = 398

 Score =  372 bits (954), Expect = e-100
 Identities = 209/356 (58%), Positives = 247/356 (69%), Gaps = 8/356 (2%)
 Frame = +3

Query: 246  RSFSSNRKNSGDDFTKPPSGSSSWKLSPDNDEDGGSIFGEDS--GDFSGFADENGSFDDK 419
            R FSSN+ N+ ++  +  S SS WKLS D   D  S F  DS  G  +G  D        
Sbjct: 39   RHFSSNQNNNNNN--EDQSSSSIWKLSSDEKFD--SFFAADSKEGSLAGITDS------- 87

Query: 420  PVKASVGRSNINVVESWGKDSSTSSDIFADIDKEFTSTKSXXXXXXXEWETAEGYKPWSF 599
            PV   +  S +   E    DS    DIF  I+KE     S       EW  +E YK W+ 
Sbjct: 88   PVHNQLQESWLEEEEGGSNDSK---DIFQGIEKE-----SAGGEDNNEWLQSEEYKMWNL 139

Query: 600  E--EEEKSEVFDI----GDGIEGFPSIIDEITEREKSEANLQLEKEEKELSVQLKGPNRA 761
            +  E++K  VFDI     D    F +      E+EK+E    LE EEKEL+  LKG NRA
Sbjct: 140  DDAEDQKDHVFDIEEINADTSSEFTTESSANVEKEKTEEQKMLEAEEKELTAVLKGSNRA 199

Query: 762  FGDLIAASGITDAMLDSLIALKDLAAVDGLPPLSEIEDIRLAKNEMKNTRAEIERQKQEE 941
            FGDLIAASGITDAMLDSLIAL+D   V+GLPPLSEIED+R  KN  K+TRA+IERQKQEE
Sbjct: 200  FGDLIAASGITDAMLDSLIALRDFEGVEGLPPLSEIEDMRYEKNTRKSTRADIERQKQEE 259

Query: 942  ISKSRVRRVDDKGRAYGTGRRKCSVARVFIQPGEGKFHINNKEFDVYFPILDHRADLLRP 1121
            ++KSRVR+VD+KGRAYGTGRRKCSVARV+I+PG+GKF +N+K+FDVYFP+LDHRA LLRP
Sbjct: 260  VAKSRVRQVDEKGRAYGTGRRKCSVARVWIEPGDGKFIVNDKQFDVYFPMLDHRAALLRP 319

Query: 1122 FSETKTLGLWDVRCTVKGGGTSGQVGAIRLGISRALQNWEPGLRPSLRAVGFLTRD 1289
            FSETKTLGLWDV+CTVKGGGT+GQVGAI+LGISRA+QNWEP LRP LR  GFLTRD
Sbjct: 320  FSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRAMQNWEPDLRPPLRNAGFLTRD 375


>ref|XP_003538940.1| PREDICTED: uncharacterized protein LOC100797241 [Glycine max]
          Length = 415

 Score =  342 bits (876), Expect = 2e-91
 Identities = 197/371 (53%), Positives = 240/371 (64%), Gaps = 12/371 (3%)
 Frame = +3

Query: 213  NPNFNFIFQTSRSFSSNR---KNSGDDFTKPPSGSSSWKLSPDNDEDGGSIFGEDSGDFS 383
            NP F  +    + FS+NR    N GD   K P  S  WK   + +E   + F E+  + S
Sbjct: 28   NPYFTVV--VPKHFSTNRGGGNNDGDG--KDPFSSRVWKDFRETEEKLDAFFEEEEEEES 83

Query: 384  G----FADENGSFDDK--PVKASVGRSNINVVESWGKDSSTSSDIFADIDKEFTSTKSXX 545
            G      D+ GS   +    +  +       ++  G D +    IF  ID+E        
Sbjct: 84   GSLVRMNDDGGSSGGRRRDERGWLQEEEQGWLQQKGLDDADEDAIFKGIDEESGGEAGGG 143

Query: 546  XXXXXEWETAEG--YKPWSF-EEEEKSEVFDIGDGIEGFPSIIDEITEREKSEANLQLEK 716
                  +    G  +KPWS  EEE+K +VFD  D + G    I  +  + K +   QLEK
Sbjct: 144  GFDESNFGVGAGEDFKPWSMKEEEDKEDVFDFKDDV-GHAGDITALDIKPKVDVE-QLEK 201

Query: 717  EEKELSVQLKGPNRAFGDLIAASGITDAMLDSLIALKDLAAVDGLPPLSEIEDIRLAKNE 896
            EE+ L+  +KGP RAFGDLIAASGITD MLDSLIALKD   V GLPPLS IED+R  KN 
Sbjct: 202  EEQALTAIVKGPKRAFGDLIAASGITDEMLDSLIALKDFDGVHGLPPLSVIEDMRYEKNT 261

Query: 897  MKNTRAEIERQKQEEISKSRVRRVDDKGRAYGTGRRKCSVARVFIQPGEGKFHINNKEFD 1076
             K+TR E+ER KQEE +K+RV++VDDKGRAYGTGRRKCSVARV++QPG G+F +N+KEFD
Sbjct: 262  RKSTRGEMERLKQEEAAKARVKQVDDKGRAYGTGRRKCSVARVWVQPGNGQFVVNDKEFD 321

Query: 1077 VYFPILDHRADLLRPFSETKTLGLWDVRCTVKGGGTSGQVGAIRLGISRALQNWEPGLRP 1256
            VYFP+L+HRA LLRPFSETKTLGLWDV CTVKGGG SGQVGAIRLGIS+ALQNWEP LRP
Sbjct: 322  VYFPMLEHRATLLRPFSETKTLGLWDVSCTVKGGGVSGQVGAIRLGISKALQNWEPDLRP 381

Query: 1257 SLRAVGFLTRD 1289
            +LR  GFLTRD
Sbjct: 382  ALRNAGFLTRD 392


>ref|XP_003540306.1| PREDICTED: uncharacterized protein LOC100796918 [Glycine max]
          Length = 411

 Score =  339 bits (870), Expect = 8e-91
 Identities = 196/367 (53%), Positives = 239/367 (65%), Gaps = 8/367 (2%)
 Frame = +3

Query: 213  NPNFNFIFQTSRSFSSNRKNSGDDFTKPPSGSSSWKLSPDNDEDGGSIFGEDS--GDFSG 386
            NP F  +    + FS+NR    D   K P  S  WK   + +E   + F E+   G  +G
Sbjct: 28   NPFFTVV--VPKHFSTNRGGGNDGDGKDPFSSRVWKDFRETEEKLDAFFEEEEECGSLAG 85

Query: 387  FADENGSFDDKPVKAS-VGRSNINVVESWGKDSSTSSDIFADIDKEFTSTKSXXXXXXXE 563
              D+  S   +  +   +       ++  G D +    IF  ID+E              
Sbjct: 86   MNDDGSSGGRRREERGWLQEEEQGWLQEKGLDDADEDAIFKGIDEESGDAGGGGFDESNF 145

Query: 564  WETA-EGYKPWSF--EEEEKSEVFDIGD--GIEGFPSIIDEITEREKSEANLQLEKEEKE 728
               A E +KPWS   EE++K +VFD  +  G EG  + +D I  +   E   QLEKEE+ 
Sbjct: 146  GVRAGEDFKPWSMKGEEDDKKDVFDFKEDVGHEGNFTALD-INPKVDVE---QLEKEEQA 201

Query: 729  LSVQLKGPNRAFGDLIAASGITDAMLDSLIALKDLAAVDGLPPLSEIEDIRLAKNEMKNT 908
            L+  +KGP RAFGDLIAASGITD MLDSLIALKD   V GLPPLS IED+R  KN  K+T
Sbjct: 202  LTAVVKGPKRAFGDLIAASGITDEMLDSLIALKDFDGVHGLPPLSVIEDMRYEKNTRKST 261

Query: 909  RAEIERQKQEEISKSRVRRVDDKGRAYGTGRRKCSVARVFIQPGEGKFHINNKEFDVYFP 1088
            R E+ER KQEE +K+RV++VDDKGRAYGTGRRKCSVARV++QPG G+F +N+KEFDVYFP
Sbjct: 262  RGEMERLKQEEAAKARVKQVDDKGRAYGTGRRKCSVARVWVQPGNGQFTVNDKEFDVYFP 321

Query: 1089 ILDHRADLLRPFSETKTLGLWDVRCTVKGGGTSGQVGAIRLGISRALQNWEPGLRPSLRA 1268
            +L+HRA LLRPFSETKTLGLWDV CTVKGGG SGQVGAIRLGIS+ALQNWEP LRP+LR 
Sbjct: 322  MLEHRATLLRPFSETKTLGLWDVDCTVKGGGVSGQVGAIRLGISKALQNWEPDLRPALRN 381

Query: 1269 VGFLTRD 1289
             GFLTRD
Sbjct: 382  AGFLTRD 388


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