BLASTX nr result

ID: Cimicifuga21_contig00023109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023109
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADJ57588.1| mitochondrial small heat shock protein [Capsicum ...    59   6e-07
ref|XP_002267332.1| PREDICTED: 23.6 kDa heat shock protein, mito...    55   9e-06

>gb|ADJ57588.1| mitochondrial small heat shock protein [Capsicum annuum]
          Length = 211

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 32/94 (34%), Positives = 46/94 (48%)
 Frame = -3

Query: 283 YDGGESSLAVSGRAGYGRLRRRDSTPSLFAGVFDPYIHTREFGQLLKHIDQLIDKESLVE 104
           YD  + S+ V  R      RR+D  PS F+ VFDP+   R   QLL  +DQ+++      
Sbjct: 41  YDDDDRSVEVERRPDRSVSRRQDGLPSFFSDVFDPFSPPRSVSQLLNMMDQMMNSPFAAA 100

Query: 103 NXXXXXXXXXXXXXXAKEDDEAVYLWVDMPGLTK 2
                           +EDD+A+Y+ +DMPGL K
Sbjct: 101 PHAMGAGNPSRRGWDVREDDDALYIKMDMPGLDK 134


>ref|XP_002267332.1| PREDICTED: 23.6 kDa heat shock protein, mitochondrial isoform 1
           [Vitis vinifera] gi|359490209|ref|XP_003634050.1|
           PREDICTED: 23.6 kDa heat shock protein, mitochondrial
           isoform 2 [Vitis vinifera] gi|147765906|emb|CAN66697.1|
           hypothetical protein VITISV_022536 [Vitis vinifera]
           gi|296084208|emb|CBI24596.3| unnamed protein product
           [Vitis vinifera]
          Length = 208

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 35/95 (36%), Positives = 46/95 (48%)
 Frame = -3

Query: 286 DYDGGESSLAVSGRAGYGRLRRRDSTPSLFAGVFDPYIHTREFGQLLKHIDQLIDKESLV 107
           DYD  E  L V   +     RR D  PS F+ VFDP+  TR   Q+L  +D  +D   L 
Sbjct: 39  DYDDDERRLDVDRLSDRSFSRRGDFAPSSFSDVFDPFSPTRSLSQVLNLMDHFMDNPFL- 97

Query: 106 ENXXXXXXXXXXXXXXAKEDDEAVYLWVDMPGLTK 2
            +               KE D+A++L VDMPGL+K
Sbjct: 98  -STSRGMGTGIRRSWDVKETDDALHLRVDMPGLSK 131


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