BLASTX nr result

ID: Cimicifuga21_contig00023108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023108
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264188.2| PREDICTED: putative cyclin-B3-1-like [Vitis ...   293   2e-77
emb|CBI24160.3| unnamed protein product [Vitis vinifera]              293   2e-77
ref|XP_003530394.1| PREDICTED: putative cyclin-B3-1-like [Glycin...   284   1e-74
ref|XP_002311288.1| predicted protein [Populus trichocarpa] gi|2...   280   1e-73
ref|XP_002316151.1| predicted protein [Populus trichocarpa] gi|2...   278   6e-73

>ref|XP_002264188.2| PREDICTED: putative cyclin-B3-1-like [Vitis vinifera]
          Length = 673

 Score =  293 bits (749), Expect = 2e-77
 Identities = 143/188 (76%), Positives = 161/188 (85%)
 Frame = -2

Query: 626  SFVTIEKNEIQLVGLTALLLASKYEDFWHPKVKDLISISVDSYTRDDMLAMEKLILKKLM 447
            S V I+KN++QLVGLTALLLASKYEDFWHP+VKDLISIS +SYTRD ML MEK++L KL 
Sbjct: 486  SLVPIKKNDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKVVLNKLK 545

Query: 446  FRLNIPTPYVFMIRFLKAAQSDVKLEHLAFYLLELCLTEYEALKYKPSLLCASAIYVARC 267
            FRLN+PTPYVFM+RFLKAAQSD +LEHLAFYL+ELCL EYEALKYKPSLLCASAIY+ARC
Sbjct: 546  FRLNVPTPYVFMMRFLKAAQSDKRLEHLAFYLIELCLVEYEALKYKPSLLCASAIYLARC 605

Query: 266  TLQISPTWTLLLRKHAHYEESELRDCAEMILMFHKDSGKGALKVTYEKYMHPDVSSVARI 87
            TLQ +P WT LL KHA YEES++RDCAEMIL F K +  G LKVTYEKYM PD S VA I
Sbjct: 606  TLQRAPAWTPLLHKHARYEESQIRDCAEMILKFQKAARTGQLKVTYEKYMRPDQSGVAAI 665

Query: 86   KAVSSLPR 63
              ++ LPR
Sbjct: 666  TPLNRLPR 673


>emb|CBI24160.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  293 bits (749), Expect = 2e-77
 Identities = 143/188 (76%), Positives = 161/188 (85%)
 Frame = -2

Query: 626 SFVTIEKNEIQLVGLTALLLASKYEDFWHPKVKDLISISVDSYTRDDMLAMEKLILKKLM 447
           S V I+KN++QLVGLTALLLASKYEDFWHP+VKDLISIS +SYTRD ML MEK++L KL 
Sbjct: 417 SLVPIKKNDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKVVLNKLK 476

Query: 446 FRLNIPTPYVFMIRFLKAAQSDVKLEHLAFYLLELCLTEYEALKYKPSLLCASAIYVARC 267
           FRLN+PTPYVFM+RFLKAAQSD +LEHLAFYL+ELCL EYEALKYKPSLLCASAIY+ARC
Sbjct: 477 FRLNVPTPYVFMMRFLKAAQSDKRLEHLAFYLIELCLVEYEALKYKPSLLCASAIYLARC 536

Query: 266 TLQISPTWTLLLRKHAHYEESELRDCAEMILMFHKDSGKGALKVTYEKYMHPDVSSVARI 87
           TLQ +P WT LL KHA YEES++RDCAEMIL F K +  G LKVTYEKYM PD S VA I
Sbjct: 537 TLQRAPAWTPLLHKHARYEESQIRDCAEMILKFQKAARTGQLKVTYEKYMRPDQSGVAAI 596

Query: 86  KAVSSLPR 63
             ++ LPR
Sbjct: 597 TPLNRLPR 604


>ref|XP_003530394.1| PREDICTED: putative cyclin-B3-1-like [Glycine max]
          Length = 562

 Score =  284 bits (726), Expect = 1e-74
 Identities = 137/187 (73%), Positives = 159/187 (85%)
 Frame = -2

Query: 626 SFVTIEKNEIQLVGLTALLLASKYEDFWHPKVKDLISISVDSYTRDDMLAMEKLILKKLM 447
           S VTI+K ++QLVGLTALLLASKYEDFWHP+VKDLISIS +SYTRD ML MEKLIL+KL 
Sbjct: 365 SLVTIKKTDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKLILRKLK 424

Query: 446 FRLNIPTPYVFMIRFLKAAQSDVKLEHLAFYLLELCLTEYEALKYKPSLLCASAIYVARC 267
           FRLN PTPYVFM+RFLKAAQSD KLEH+AF+L++LCL EYEAL +KPSLLCASA+YVARC
Sbjct: 425 FRLNAPTPYVFMVRFLKAAQSDKKLEHMAFFLVDLCLVEYEALAFKPSLLCASALYVARC 484

Query: 266 TLQISPTWTLLLRKHAHYEESELRDCAEMILMFHKDSGKGALKVTYEKYMHPDVSSVARI 87
           TLQI+P WT LL KHA YE S++RDCA+MIL FHK +G G LKV YEKY   ++S VA +
Sbjct: 485 TLQITPPWTPLLHKHARYEVSQIRDCADMILKFHKAAGVGKLKVIYEKYSRQELSRVAAV 544

Query: 86  KAVSSLP 66
           K +  LP
Sbjct: 545 KPLDKLP 551


>ref|XP_002311288.1| predicted protein [Populus trichocarpa] gi|222851108|gb|EEE88655.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  280 bits (717), Expect = 1e-73
 Identities = 135/183 (73%), Positives = 158/183 (86%)
 Frame = -2

Query: 614 IEKNEIQLVGLTALLLASKYEDFWHPKVKDLISISVDSYTRDDMLAMEKLILKKLMFRLN 435
           I+KNE+QLVGLTAL LASKYEDFWHP++KDLISIS +SY+RD ML MEKL+LKKL FRLN
Sbjct: 150 IKKNELQLVGLTALFLASKYEDFWHPRIKDLISISAESYSRDQMLLMEKLLLKKLKFRLN 209

Query: 434 IPTPYVFMIRFLKAAQSDVKLEHLAFYLLELCLTEYEALKYKPSLLCASAIYVARCTLQI 255
            PTPYVFM+RFLKAAQS++KLEHLAFYL+ELCL EY+ALK+KPS+LCASAIYVAR TLQ+
Sbjct: 210 EPTPYVFMLRFLKAAQSEMKLEHLAFYLIELCLVEYKALKFKPSMLCASAIYVARSTLQM 269

Query: 254 SPTWTLLLRKHAHYEESELRDCAEMILMFHKDSGKGALKVTYEKYMHPDVSSVARIKAVS 75
            P WT LL +HAHY+ S++RDCAEMIL F K +    L+VTYEKYM PD+S VA IK +S
Sbjct: 270 VPAWTPLLARHAHYQVSQMRDCAEMILRFQKAARTSQLRVTYEKYMRPDLSGVAAIKPLS 329

Query: 74  SLP 66
            LP
Sbjct: 330 ELP 332


>ref|XP_002316151.1| predicted protein [Populus trichocarpa] gi|222865191|gb|EEF02322.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  278 bits (711), Expect = 6e-73
 Identities = 135/187 (72%), Positives = 157/187 (83%)
 Frame = -2

Query: 626 SFVTIEKNEIQLVGLTALLLASKYEDFWHPKVKDLISISVDSYTRDDMLAMEKLILKKLM 447
           S V I+K+E+QLVGLTALLLASKYEDFWHP++KDLISIS +SYTR  ML MEK  LKKL 
Sbjct: 146 SQVEIKKSELQLVGLTALLLASKYEDFWHPRIKDLISISAESYTRGQMLVMEKFFLKKLK 205

Query: 446 FRLNIPTPYVFMIRFLKAAQSDVKLEHLAFYLLELCLTEYEALKYKPSLLCASAIYVARC 267
           FRLN PTPYVFM+RFLKAAQ+D KLEHLAFYL+ELCL EY+ALK+KPS+LCASAIYVAR 
Sbjct: 206 FRLNEPTPYVFMLRFLKAAQTDQKLEHLAFYLIELCLVEYKALKFKPSMLCASAIYVARS 265

Query: 266 TLQISPTWTLLLRKHAHYEESELRDCAEMILMFHKDSGKGALKVTYEKYMHPDVSSVARI 87
           TLQ+SP WT LL +H HY+ S++RDCAEMIL F K +    L+VTYEKYM PD+S VA I
Sbjct: 266 TLQVSPAWTPLLTRHTHYQVSQIRDCAEMILRFQKAARTSQLRVTYEKYMRPDLSGVAAI 325

Query: 86  KAVSSLP 66
           K ++ LP
Sbjct: 326 KPLNELP 332


Top