BLASTX nr result

ID: Cimicifuga21_contig00023079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023079
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                183   2e-44
emb|CAN65555.1| hypothetical protein VITISV_009833 [Vitis vinifera]   163   2e-38
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]   162   2e-38
emb|CAN75351.1| hypothetical protein VITISV_031045 [Vitis vinifera]   158   4e-37
gb|ACA61613.1| hypothetical protein AP2_E11.1 [Arabidopsis lyrat...   157   9e-37

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  183 bits (464), Expect = 2e-44
 Identities = 92/170 (54%), Positives = 120/170 (70%)
 Frame = +3

Query: 15   LTSNSLSFCNTIIAQLSAHFSMKDLGDLHYFLGLEIQRNSKGLFFSQSKYISDLLTKAHM 194
            +T +S++ C +II+QL   F +KDLGD++YFLG+E+ ++ +GL   Q+KY  DLL K  M
Sbjct: 1347 ITGSSVTECQSIISQLQTMFPVKDLGDINYFLGIEVHKSDQGLLLHQAKYALDLLKKTDM 1406

Query: 195  ENXXXXXXXXXXXXXLDPIAGDLLDDPFVYRSLVGGLQYLTWTRPDISFSVSQVSQFMHQ 374
                           LD  +G LL DP  YRS VG LQYLTWTRPD++F+V+QV Q+MH 
Sbjct: 1407 LGAKPCATPVSTSK-LDH-SGTLLSDPTSYRSTVGALQYLTWTRPDLAFAVNQVCQYMHS 1464

Query: 375  PRTSHLVAVKRILHFLKGTITNGIYFSKGSQLLTAYSDADWAGCAFDRRS 524
            P+T HL AVKRIL +LKGT+  G++F+KGSQ LTA+SDADWAGC  DRRS
Sbjct: 1465 PQTIHLQAVKRILRYLKGTVDLGLWFTKGSQCLTAWSDADWAGCPVDRRS 1514


>emb|CAN65555.1| hypothetical protein VITISV_009833 [Vitis vinifera]
          Length = 325

 Score =  163 bits (412), Expect = 2e-38
 Identities = 87/171 (50%), Positives = 109/171 (63%), Gaps = 1/171 (0%)
 Frame = +3

Query: 15  LTSNSLSFCNTIIAQLSAHFSMKDLGDLHYFLGLEIQRNSKGLFFSQSKYISDLLTKAHM 194
           +T ++ S  +T I +LS  FSMKDLG+LHYFLG+E+Q N KGLF SQ+KY  DLL +A M
Sbjct: 3   ITGSTPSLVHTFITRLSNEFSMKDLGBLHYFLGVEVQANEKGLFLSQTKYALDLLQRASM 62

Query: 195 ENXXXXXXXXXXXXXLDPIAGDLLDDPFVYRSLVGGLQYLTWTRPDISFSVSQVSQFMHQ 374
            +             L    G L  DP ++RSL G LQYLT TRPD+SFSV+ + QFMH 
Sbjct: 63  IDAKPISTPFVVGQHLSA-EGTLFSDPTLFRSLAGALQYLTITRPDLSFSVNSICQFMHA 121

Query: 375 PRTSHLVAVKRILHFLKGTITNGIYFSKGS-QLLTAYSDADWAGCAFDRRS 524
           P   H  A+KRIL ++KGT  +G+   K S + L  YSDADWAGC   RRS
Sbjct: 122 PTEDHFCALKRILRYVKGTAHHGLQLHKQSTRDLLGYSDADWAGCPDTRRS 172


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  162 bits (411), Expect = 2e-38
 Identities = 88/171 (51%), Positives = 109/171 (63%), Gaps = 1/171 (0%)
 Frame = +3

Query: 15   LTSNSLSFCNTIIAQLSAHFSMKDLGDLHYFLGLEIQRNSKGLFFSQSKYISDLLTKAHM 194
            +T ++ S  +T I +LS  FSMKDLGDLHYFLG+E+Q N KGLF SQ+KY  DLL +A M
Sbjct: 1039 ITGSTPSLVHTFITRLSNEFSMKDLGDLHYFLGVEVQANEKGLFLSQTKYALDLLQRASM 1098

Query: 195  ENXXXXXXXXXXXXXLDPIAGDLLDDPFVYRSLVGGLQYLTWTRPDISFSVSQVSQFMHQ 374
             +             L    G L  DP ++RSL G LQYLT TRPD+SFSV+ + QFMH 
Sbjct: 1099 IDAKPISTPFVVGQHLSA-EGTLFSDPTLFRSLAGALQYLTITRPDLSFSVNSIFQFMHA 1157

Query: 375  PRTSHLVAVKRILHFLKGTITNGIYFSKGS-QLLTAYSDADWAGCAFDRRS 524
            P   H  A+KRIL ++KGT  +G+   K S + L  YSDADWAGC   RRS
Sbjct: 1158 PTEDHFRALKRILRYVKGTAHHGLQLHKQSTRDLLGYSDADWAGCPDTRRS 1208


>emb|CAN75351.1| hypothetical protein VITISV_031045 [Vitis vinifera]
          Length = 300

 Score =  158 bits (400), Expect = 4e-37
 Identities = 86/171 (50%), Positives = 107/171 (62%), Gaps = 1/171 (0%)
 Frame = +3

Query: 15  LTSNSLSFCNTIIAQLSAHFSMKDLGDLHYFLGLEIQRNSKGLFFSQSKYISDLLTKAHM 194
           +T ++ S  +T I +LS  FSMKDLGDLHYFLG+E+Q N KGLF SQ+KY  DLL +A M
Sbjct: 3   ITGSTPSLVHTFITRLSNEFSMKDLGDLHYFLGVEVQANEKGLFLSQTKYALDLLQRASM 62

Query: 195 ENXXXXXXXXXXXXXLDPIAGDLLDDPFVYRSLVGGLQYLTWTRPDISFSVSQVSQFMHQ 374
            +             L    G L  DP ++RSL G LQYLT T PD+SFSV+ + QFMH 
Sbjct: 63  IDAKPISTPFVVGQHLSA-EGTLFSDPTLFRSLAGALQYLTITSPDLSFSVNSICQFMHA 121

Query: 375 PRTSHLVAVKRILHFLKGTITNGIYFSKGS-QLLTAYSDADWAGCAFDRRS 524
           P   H  A+KRIL ++KGT  +G+   K S + L  YSDADW GC   RRS
Sbjct: 122 PTEDHFRALKRILRYVKGTAHHGLQLHKQSTRDLLGYSDADWDGCPDTRRS 172


>gb|ACA61613.1| hypothetical protein AP2_E11.1 [Arabidopsis lyrata subsp. petraea]
          Length = 471

 Score =  157 bits (397), Expect = 9e-37
 Identities = 80/171 (46%), Positives = 111/171 (64%), Gaps = 1/171 (0%)
 Frame = +3

Query: 15  LTSNSLSFCNTIIAQLSAHFSMKDLGDLHYFLGLEIQRNSKGLFFSQSKYISDLLTKAHM 194
           LT++S      II++L   F M D+G LH+FLG++   N+KGLF SQS Y  +++ +A M
Sbjct: 156 LTASSTLLLQKIISKLKTEFPMTDMGKLHHFLGVKADFNTKGLFLSQSVYAQEIIQRAGM 215

Query: 195 ENXXXXXXXXXXXXXLDPIAGDLLDDPFVYRSLVGGLQYLTWTRPDISFSVSQVSQFMHQ 374
           E+             L    G+L+++P  YR L G LQYLT+TRPDIS++V QV  +MH+
Sbjct: 216 EDCKPLATPVDLQSKLSVDDGELIENPTFYRRLAGALQYLTFTRPDISYAVHQVCLYMHK 275

Query: 375 PRTSHLVAVKRILHFLKGTITNGIYFSKGS-QLLTAYSDADWAGCAFDRRS 524
           PR  HL A+KRI+ +L+GT++ GI  ++G    LTAYSDADWAGC   RRS
Sbjct: 276 PRVPHLQALKRIIRYLQGTLSYGIQMTRGRIDTLTAYSDADWAGCPDTRRS 326


Top