BLASTX nr result

ID: Cimicifuga21_contig00023045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023045
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20378.3| unnamed protein product [Vitis vinifera]              120   4e-25
ref|XP_002316934.1| cyclic nucleotide-gated channel [Populus tri...   108   2e-21
ref|XP_002330422.1| predicted protein [Populus trichocarpa] gi|2...   103   5e-20
ref|XP_002281734.1| PREDICTED: uncharacterized protein LOC100247...   100   5e-19
ref|XP_002521829.1| conserved hypothetical protein [Ricinus comm...    92   1e-16

>emb|CBI20378.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score =  120 bits (301), Expect = 4e-25
 Identities = 67/157 (42%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
 Frame = +1

Query: 229 DHWAFLEEIDAPMWVDLALESTSIDQDINASWFEVVHPFHQLSSHHL------LGEGKVI 390
           DHWAFLEE +APMW DL LE+ + +QD++  WF + HPFHQ SSH L        EG   
Sbjct: 8   DHWAFLEEFEAPMWADLTLEAKTNNQDVDDKWFHISHPFHQFSSHQLKSAFSGSSEGSEN 67

Query: 391 SDAEXXXXXXXXXXXXXXXXRGKHYRSRRWKGDSYTLSVGKKHPIKSFGAKTSLMVSSSF 570
            D +                RGKHYRSR W  ++   S+ K+HP+KS   KTS + S S 
Sbjct: 68  LDFDLHGPSSPKLPSSVSRSRGKHYRSRNWGKENGGFSLNKQHPVKSLSGKTSWVDSGSS 127

Query: 571 QEGKPKVKISSGNPKRTSSWKGKLFSEKSAIEAMRPD 681
           QE KPK   S GN K T S K  L  + S+     P+
Sbjct: 128 QEIKPKP--SCGNLKGTCSSKTSLGCDSSSTRTSIPN 162


>ref|XP_002316934.1| cyclic nucleotide-gated channel [Populus trichocarpa]
           gi|222859999|gb|EEE97546.1| cyclic nucleotide-gated
           channel [Populus trichocarpa]
          Length = 565

 Score =  108 bits (269), Expect = 2e-21
 Identities = 78/208 (37%), Positives = 98/208 (47%), Gaps = 6/208 (2%)
 Frame = +1

Query: 229 DHWAFLEEIDAPMWVDLALESTSIDQDINASWFEVVHPFHQLSSHHL------LGEGKVI 390
           DHWAFLEEI+APMWVD  +E  S  QD++  WF   HPFHQ +S  L        E  + 
Sbjct: 9   DHWAFLEEIEAPMWVDFTIEEKSNYQDVDDKWFHTSHPFHQCTSLRLKAAFAHSSERSMS 68

Query: 391 SDAEXXXXXXXXXXXXXXXXRGKHYRSRRWKGDSYTLSVGKKHPIKSFGAKTSLMVSSSF 570
           SD E                RGKHY   +W G    LS+ KKHP+K    K+S + S   
Sbjct: 69  SDFEFKGPSSPNIPSSVSRSRGKHYAGMKWGGGECDLSMNKKHPVKVLNDKSSRVNSEPS 128

Query: 571 QEGKPKVKISSGNPKRTSSWKGKLFSEKSAIEAMRPDLLQRKPKLQNPKITPNLKASSVG 750
            E KP  K+S  N K TS  K  + S KS                +N K T +LKA S G
Sbjct: 129 DEIKP--KLSLANSKGTSRSKLSMVSGKSF--------------TRNAKET-DLKAKS-G 170

Query: 751 EGTSSNTRNPKNGVKSCFGDSKNTSSFT 834
           +G S ++ N    + S      NTS+ T
Sbjct: 171 QGGSESSLNSGMAMVS----DSNTSTVT 194


>ref|XP_002330422.1| predicted protein [Populus trichocarpa] gi|222871807|gb|EEF08938.1|
           predicted protein [Populus trichocarpa]
          Length = 490

 Score =  103 bits (257), Expect = 5e-20
 Identities = 59/149 (39%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
 Frame = +1

Query: 229 DHWAFLEEIDAPMWVDLALESTSIDQDINASWFEVVHPFHQLSSHHL------LGEGKVI 390
           DHWAFLEEI+AP+WVD  +E+ S  QD++  WF   HPFHQ SS  L       GE    
Sbjct: 9   DHWAFLEEIEAPIWVDFLVEAKSNYQDVDDEWFRTSHPFHQCSSGQLKAAFAYSGEKSTS 68

Query: 391 SDAEXXXXXXXXXXXXXXXXRGKHYRSRRWKGDSYTLSVGKKHPIKSFGAKTSLMVSSSF 570
           SD E                RGKHY S++W G  + +S+ K+HP+K     + +   +S 
Sbjct: 69  SDFECKGSFSPNIPSSVSRSRGKHYASKKWGGGGHDISMNKQHPVKVLSKSSRV---NSE 125

Query: 571 QEGKPKVKISSGNPKRTSSWKGKLFSEKS 657
              K K K+S  N K TS  K  + S KS
Sbjct: 126 PNDKIKPKLSLVNSKGTSRSKVSVVSGKS 154


>ref|XP_002281734.1| PREDICTED: uncharacterized protein LOC100247040 [Vitis vinifera]
          Length = 445

 Score =  100 bits (248), Expect = 5e-19
 Identities = 63/157 (40%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
 Frame = +1

Query: 229 DHWAFLEEIDAPMWVDLALESTSIDQDINASWFEVVHPFHQLSSHHLLG------EGKVI 390
           DHWAFLEE +APMW DL LE+ + +QD+          FHQ SSH L        EG   
Sbjct: 8   DHWAFLEEFEAPMWADLTLEAKTNNQDV----------FHQFSSHQLKSAFSGSSEGSEN 57

Query: 391 SDAEXXXXXXXXXXXXXXXXRGKHYRSRRWKGDSYTLSVGKKHPIKSFGAKTSLMVSSSF 570
            D +                RGKHYRSR W  ++   S+ K+HP+KS   KTS + S S 
Sbjct: 58  LDFDLHGPSSPKLPSSVSRSRGKHYRSRNWGKENGGFSLNKQHPVKSLSGKTSWVDSGSS 117

Query: 571 QEGKPKVKISSGNPKRTSSWKGKLFSEKSAIEAMRPD 681
           QE KPK   S GN K T S K  L  + S+     P+
Sbjct: 118 QEIKPKP--SCGNLKGTCSSKTSLGCDSSSTRTSIPN 152


>ref|XP_002521829.1| conserved hypothetical protein [Ricinus communis]
           gi|223539042|gb|EEF40639.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 373

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 68/203 (33%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
 Frame = +1

Query: 229 DHWAFLEEIDAPMWVDLALESTSIDQDINASWFEVVHPFHQLSSHHL------LGEGKVI 390
           DHWAFL+EI+APMWVDL LE+ S   D++  WF   H FHQ SS  L       GEG   
Sbjct: 13  DHWAFLDEIEAPMWVDLTLEANSNYTDVDDGWFHTSHLFHQCSSLQLKAAFAYSGEGSAS 72

Query: 391 SD-AEXXXXXXXXXXXXXXXXRGKHYRSRRWKGDSYTLSVGKKHPIKSFGAKTSLMVS-- 561
           SD  +                RGKHY S++W G     S+ KKHP+K+   K++   +  
Sbjct: 73  SDIIDLKRTSSPELPSSVSRSRGKHYASKKWGGKCPDFSLNKKHPVKALSGKSTTESTGF 132

Query: 562 -------SSFQEGKPKVKI---SSGNPKRTSSWKGKLFSEKS-AIEAMRPDLLQRKPKLQ 708
                  S   + K K+K+   SS N      W     +++S      R +    +    
Sbjct: 133 VGNETKLSFIIQSKLKLKLVWCSSSNSGYDVQWPTFALTQQSEQTPNSRNEARMIRVMKD 192

Query: 709 NPKITPNLKASSV-GEGTSSNTR 774
             K +   KAS V G+G +SN+R
Sbjct: 193 KVKASYASKASFVQGKGGTSNSR 215


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