BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023043
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...   165   3e-39
ref|XP_002451844.1| hypothetical protein SORBIDRAFT_04g008547 [S...   165   4e-39
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   164   9e-39
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   158   4e-37
gb|EEE59262.1| hypothetical protein OsJ_11281 [Oryza sativa Japo...   153   2e-35

>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score =  165 bits (418), Expect = 3e-39
 Identities = 83/160 (51%), Positives = 112/160 (70%), Gaps = 2/160 (1%)
 Frame = -1

Query: 475 EELIKEVTLE-VKSALFAMDPHKAPGPDGFTPLFYQQYWDIINLDLLSTIRSFMTSGCLI 299
           E+LIK VT E V++ +F M   KAPGPDG   +FYQ++W I+  D+   +  F T+G ++
Sbjct: 435 EDLIKPVTREEVRNVVFQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYIL 494

Query: 298 KEMNHTNITLIPKISGPETLANFRPISLCNVSMRIITKILANRLKPLLDKIISPAQSAFV 119
           +E N TNI LIPK+  PE    FRPISLCNV  +II+KI+ANRLKP+L  I++P Q+AFV
Sbjct: 495 QEWNQTNICLIPKVERPEQACQFRPISLCNVIYKIISKIIANRLKPILKSIVTPYQNAFV 554

Query: 118 KGRQIFDNIVLAHEIVRTLK-RKKGAAGCMAIKLDMSKAF 2
            GR I DN ++AHE+V  +K RKKG     A+K+DM KA+
Sbjct: 555 PGRLISDNCLIAHEVVNLIKQRKKGTHFLAALKIDMFKAY 594


>ref|XP_002451844.1| hypothetical protein SORBIDRAFT_04g008547 [Sorghum bicolor]
           gi|241931675|gb|EES04820.1| hypothetical protein
           SORBIDRAFT_04g008547 [Sorghum bicolor]
          Length = 599

 Score =  165 bits (417), Expect = 4e-39
 Identities = 81/154 (52%), Positives = 107/154 (69%)
 Frame = -1

Query: 466 IKEVTLEVKSALFAMDPHKAPGPDGFTPLFYQQYWDIINLDLLSTIRSFMTSGCLIKEMN 287
           ++  +LEV+ ALF M  +KAPGPDGFT  FYQ +WD++   +   +  F+  G + + +N
Sbjct: 446 VRRDSLEVERALFMMGANKAPGPDGFTAGFYQNHWDVVGPSITKAVIHFLNGGHMPEGIN 505

Query: 286 HTNITLIPKISGPETLANFRPISLCNVSMRIITKILANRLKPLLDKIISPAQSAFVKGRQ 107
            T I LIPK+  P+ L NFRPISLCNV  +I +K+LANRL+  LD+IIS  QSAFV GR 
Sbjct: 506 QTTIVLIPKVKHPQDLKNFRPISLCNVIYKICSKVLANRLRVFLDEIISEEQSAFVPGRL 565

Query: 106 IFDNIVLAHEIVRTLKRKKGAAGCMAIKLDMSKA 5
           I DN+++A+E    LKRKKG  G  AIKLDM+KA
Sbjct: 566 ITDNVLVAYECTHYLKRKKGKTGACAIKLDMAKA 599


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  164 bits (414), Expect = 9e-39
 Identities = 84/161 (52%), Positives = 109/161 (67%), Gaps = 2/161 (1%)
 Frame = -1

Query: 478 NEELIK-EVTLEVKSALFAMDPHKAPGPDGFTPLFYQQYWDIINLDLLSTIRSFMTSGCL 302
           NEELIK    LE+K ALF++   KAPGPDGF+  F+  YWDII  D+   IRSF    CL
Sbjct: 362 NEELIKISSLLEIKEALFSISADKAPGPDGFSASFFHAYWDIIEADVSRDIRSFFVDSCL 421

Query: 301 IKEMNHTNITLIPKISGPETLANFRPISLCNVSMRIITKILANRLKPLLDKIISPAQSAF 122
              +N T++TLIPKIS P  ++++RPI+LCNV  +I+ KIL  RL+P L ++IS  QSAF
Sbjct: 422 SPRLNETHVTLIPKISAPRKVSDYRPIALCNVQYKIVAKILTRRLQPWLSELISLHQSAF 481

Query: 121 VKGRQIFDNIVLAHEIVRTLKRKKGAAGC-MAIKLDMSKAF 2
           V GR I DN+++ HEI+  L+       C MAIK DMSKA+
Sbjct: 482 VPGRAIADNVLITHEILHFLRVSGAKKYCSMAIKTDMSKAY 522


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/161 (47%), Positives = 108/161 (67%), Gaps = 1/161 (0%)
 Frame = -1

Query: 481 DNEELIKEVTLE-VKSALFAMDPHKAPGPDGFTPLFYQQYWDIINLDLLSTIRSFMTSGC 305
           DN  L   V+ E +K+A+F + P K+PGPDGF P F+Q+YW +I   +   +++F  SG 
Sbjct: 436 DNAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWTLIGKSVCRAVQAFFHSGY 495

Query: 304 LIKEMNHTNITLIPKISGPETLANFRPISLCNVSMRIITKILANRLKPLLDKIISPAQSA 125
           ++KE+NHT + LIPK+  P    +FRPISLC+   ++I+KI+ NRLK  L KII P Q A
Sbjct: 496 MLKEVNHTFLALIPKVDKPVNANHFRPISLCSTIYKVISKIITNRLKITLGKIIHPLQGA 555

Query: 124 FVKGRQIFDNIVLAHEIVRTLKRKKGAAGCMAIKLDMSKAF 2
           F+  R I DNI++AHE+  + K K G  G +AIKLDM KA+
Sbjct: 556 FIPERLIQDNILIAHEVFHSFKNKTGRGGWIAIKLDMEKAY 596


>gb|EEE59262.1| hypothetical protein OsJ_11281 [Oryza sativa Japonica Group]
          Length = 541

 Score =  153 bits (386), Expect = 2e-35
 Identities = 76/155 (49%), Positives = 102/155 (65%)
 Frame = -1

Query: 469 LIKEVTLEVKSALFAMDPHKAPGPDGFTPLFYQQYWDIINLDLLSTIRSFMTSGCLIKEM 290
           ++ +   EV  AL  M  HKAPGPD FT  FYQ +W+ I   +   + +F+  G L + +
Sbjct: 387 MVVDPVSEVDRALSMMGAHKAPGPDSFTVGFYQAHWETIGPSVTRAVLNFLNGGELPEAI 446

Query: 289 NHTNITLIPKISGPETLANFRPISLCNVSMRIITKILANRLKPLLDKIISPAQSAFVKGR 110
           N T + L PK+  P+ L NFRPISLCNV  ++ +K+LANRL+  LD+IIS  QSAFV GR
Sbjct: 447 NQTTLVLTPKVKHPQDLKNFRPISLCNVVYKLCSKVLANRLRVFLDEIISAEQSAFVPGR 506

Query: 109 QIFDNIVLAHEIVRTLKRKKGAAGCMAIKLDMSKA 5
            I DN+++A+E    LKRKKG  G  A+KLDM+KA
Sbjct: 507 LITDNVLVAYECTHYLKRKKGKTGACAVKLDMAKA 541