BLASTX nr result

ID: Cimicifuga21_contig00023042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023042
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                  123   2e-26
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...   122   3e-26
ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264...   120   2e-25
ref|XP_003543693.1| PREDICTED: uncharacterized protein LOC100792...   120   2e-25
emb|CBI29080.3| unnamed protein product [Vitis vinifera]              120   2e-25

>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/87 (63%), Positives = 71/87 (81%)
 Frame = -1

Query: 538  IRLLVPSNYPNCSPVLLDNLPLELSEGPQDLLEKSKLRFSRSLRYLSKPMSLGDMVRSWD 359
            +RLLVP+NYPNCSP+LLD  P+E+S+  +DL  K+K RFS SLR LS+PMSLG++ R+WD
Sbjct: 1313 LRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQPMSLGEIARTWD 1372

Query: 358  TCSRAVILEYCVQNGGGDFSTRYGTWE 278
             C+R VI EY  Q+GGG FS++YGTWE
Sbjct: 1373 VCARTVISEYAQQSGGGSFSSKYGTWE 1399


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
            gi|223530005|gb|EEF31930.1| transcription cofactor,
            putative [Ricinus communis]
          Length = 1382

 Score =  122 bits (307), Expect = 3e-26
 Identities = 55/87 (63%), Positives = 73/87 (83%)
 Frame = -1

Query: 538  IRLLVPSNYPNCSPVLLDNLPLELSEGPQDLLEKSKLRFSRSLRYLSKPMSLGDMVRSWD 359
            +RLLVP+NYPNCSP+LLD LP+E+S+  +DL  K+K RF+ SLR LS+PMSLG++ R+WD
Sbjct: 1290 LRLLVPTNYPNCSPILLDKLPVEVSKEYEDLSVKAKSRFNISLRSLSQPMSLGEIARTWD 1349

Query: 358  TCSRAVILEYCVQNGGGDFSTRYGTWE 278
             C+RAVI E+  Q+GGG FS++YGTWE
Sbjct: 1350 VCARAVISEHAQQSGGGSFSSKYGTWE 1376


>ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera]
          Length = 1671

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/87 (63%), Positives = 70/87 (80%)
 Frame = -1

Query: 538  IRLLVPSNYPNCSPVLLDNLPLELSEGPQDLLEKSKLRFSRSLRYLSKPMSLGDMVRSWD 359
            +RLLVP+NYPN SP+LLD  P+E+S+  +DL  K+K RFS SLR LS+PMSLG++ R+WD
Sbjct: 1579 LRLLVPTNYPNSSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQPMSLGEIARTWD 1638

Query: 358  TCSRAVILEYCVQNGGGDFSTRYGTWE 278
             C+RAVI EY  Q+GGG FS+RYG WE
Sbjct: 1639 VCARAVISEYAQQSGGGSFSSRYGAWE 1665


>ref|XP_003543693.1| PREDICTED: uncharacterized protein LOC100792913 [Glycine max]
          Length = 1324

 Score =  120 bits (300), Expect = 2e-25
 Identities = 54/87 (62%), Positives = 70/87 (80%)
 Frame = -1

Query: 538  IRLLVPSNYPNCSPVLLDNLPLELSEGPQDLLEKSKLRFSRSLRYLSKPMSLGDMVRSWD 359
            +RLLVP+NYPNCSP+LLD  P+E S+  +DL  K+K RFS SLR LS+PMSLG++ R+WD
Sbjct: 1233 LRLLVPTNYPNCSPILLDKFPVESSKENEDLSVKAKSRFSISLRSLSQPMSLGEIARTWD 1292

Query: 358  TCSRAVILEYCVQNGGGDFSTRYGTWE 278
             C+R VI E+  Q+GGG FS++YGTWE
Sbjct: 1293 VCARTVISEHAQQSGGGSFSSKYGTWE 1319


>emb|CBI29080.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/87 (63%), Positives = 70/87 (80%)
 Frame = -1

Query: 538 IRLLVPSNYPNCSPVLLDNLPLELSEGPQDLLEKSKLRFSRSLRYLSKPMSLGDMVRSWD 359
           +RLLVP+NYPN SP+LLD  P+E+S+  +DL  K+K RFS SLR LS+PMSLG++ R+WD
Sbjct: 208 LRLLVPTNYPNSSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQPMSLGEIARTWD 267

Query: 358 TCSRAVILEYCVQNGGGDFSTRYGTWE 278
            C+RAVI EY  Q+GGG FS+RYG WE
Sbjct: 268 VCARAVISEYAQQSGGGSFSSRYGAWE 294


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