BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022940
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27010.3| unnamed protein product [Vitis vinifera]              203   1e-50
ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containi...   203   1e-50
emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]   203   1e-50
ref|XP_002533966.1| pentatricopeptide repeat-containing protein,...   193   1e-47
ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containi...   189   2e-46

>emb|CBI27010.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  203 bits (516), Expect = 1e-50
 Identities = 98/143 (68%), Positives = 115/143 (80%)
 Frame = -1

Query: 429 NGLIAGYANKGRFFDVLGAFKRMLVESGVRPNDATLVYVLSACSRLGALALGKWVHVYAK 250
           N LI GYA+ G FF+VLG+FKRML ES V PNDATLV VLSAC+RLGAL LGKWVHVYA+
Sbjct: 141 NALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAE 200

Query: 249 SNDLMKNVFVGNGLIDMYSKCGSIEAAVDVFNGMVSKDLITWNIVIGGLATHGRGTDALQ 70
           S+ L  NV+VGN L+DMY+KCG IE A+ VF GM +KDLI+WN +IGGLA H RG DAL 
Sbjct: 201 SSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALN 260

Query: 69  VFDQMMKTGEKPDEITFVGVLCA 1
           +F QM   G+KPD ITF+G+LCA
Sbjct: 261 LFFQMKNAGQKPDGITFIGILCA 283


>ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 623

 Score =  203 bits (516), Expect = 1e-50
 Identities = 98/143 (68%), Positives = 115/143 (80%)
 Frame = -1

Query: 429 NGLIAGYANKGRFFDVLGAFKRMLVESGVRPNDATLVYVLSACSRLGALALGKWVHVYAK 250
           N LI GYA+ G FF+VLG+FKRML ES V PNDATLV VLSAC+RLGAL LGKWVHVYA+
Sbjct: 299 NALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAE 358

Query: 249 SNDLMKNVFVGNGLIDMYSKCGSIEAAVDVFNGMVSKDLITWNIVIGGLATHGRGTDALQ 70
           S+ L  NV+VGN L+DMY+KCG IE A+ VF GM +KDLI+WN +IGGLA H RG DAL 
Sbjct: 359 SSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALN 418

Query: 69  VFDQMMKTGEKPDEITFVGVLCA 1
           +F QM   G+KPD ITF+G+LCA
Sbjct: 419 LFFQMKNAGQKPDGITFIGILCA 441



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/123 (31%), Positives = 60/123 (48%)
 Frame = -1

Query: 429 NGLIAGYANKGRFFDVLGAFKRMLVESGVRPNDATLVYVLSACSRLGALALGKWVHVYAK 250
           N +  GYA    + +V+  F +M     +RPN  T   VL +C ++ AL  G+ VH +  
Sbjct: 105 NSMFRGYAQSESYREVVFLFFQMK-GMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLI 163

Query: 249 SNDLMKNVFVGNGLIDMYSKCGSIEAAVDVFNGMVSKDLITWNIVIGGLATHGRGTDALQ 70
                 N FVG  LIDMYS  G++  A  +F  M  ++++ W  +I G         A +
Sbjct: 164 KCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARR 223

Query: 69  VFD 61
           +FD
Sbjct: 224 LFD 226


>emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
          Length = 686

 Score =  203 bits (516), Expect = 1e-50
 Identities = 98/143 (68%), Positives = 115/143 (80%)
 Frame = -1

Query: 429 NGLIAGYANKGRFFDVLGAFKRMLVESGVRPNDATLVYVLSACSRLGALALGKWVHVYAK 250
           N LI GYA+ G FF+VLG+FKRML ES V PNDATLV VLSAC+RLGAL LGKWVHVYA+
Sbjct: 362 NALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAE 421

Query: 249 SNDLMKNVFVGNGLIDMYSKCGSIEAAVDVFNGMVSKDLITWNIVIGGLATHGRGTDALQ 70
           S+ L  NV+VGN L+DMY+KCG IE A+ VF GM +KDLI+WN +IGGLA H RG DAL 
Sbjct: 422 SSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALN 481

Query: 69  VFDQMMKTGEKPDEITFVGVLCA 1
           +F QM   G+KPD ITF+G+LCA
Sbjct: 482 LFFQMKNAGQKPDGITFIGILCA 504



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/123 (31%), Positives = 60/123 (48%)
 Frame = -1

Query: 429 NGLIAGYANKGRFFDVLGAFKRMLVESGVRPNDATLVYVLSACSRLGALALGKWVHVYAK 250
           N +  GYA    + +V+  F +M     +RPN  T   VL +C ++ AL  G+ VH +  
Sbjct: 168 NSMFRGYAQSESYREVVFLFFQMK-GMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLI 226

Query: 249 SNDLMKNVFVGNGLIDMYSKCGSIEAAVDVFNGMVSKDLITWNIVIGGLATHGRGTDALQ 70
                 N FVG  LIDMYS  G++  A  +F  M  ++++ W  +I G         A +
Sbjct: 227 KCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARR 286

Query: 69  VFD 61
           +FD
Sbjct: 287 LFD 289


>ref|XP_002533966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526049|gb|EEF28413.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 515

 Score =  193 bits (491), Expect = 1e-47
 Identities = 93/143 (65%), Positives = 112/143 (78%)
 Frame = -1

Query: 429 NGLIAGYANKGRFFDVLGAFKRMLVESGVRPNDATLVYVLSACSRLGALALGKWVHVYAK 250
           NGLI GYA+ G F +VL +FKRMLV+  V PNDATLV VLSAC+RLGAL LGKWVH+YA+
Sbjct: 327 NGLIGGYAHHGCFLEVLSSFKRMLVDGIVVPNDATLVTVLSACARLGALDLGKWVHMYAQ 386

Query: 249 SNDLMKNVFVGNGLIDMYSKCGSIEAAVDVFNGMVSKDLITWNIVIGGLATHGRGTDALQ 70
           SN    NV++GN LIDMY+KCG++E A+ VF  +  KDLI+WN +IGGLA HGR  DAL 
Sbjct: 387 SNGYKGNVYIGNALIDMYAKCGNVENAIVVFKSLDKKDLISWNTLIGGLAVHGRAADALY 446

Query: 69  VFDQMMKTGEKPDEITFVGVLCA 1
           +F +M   GEKPD ITF+GVLCA
Sbjct: 447 LFSRMKDAGEKPDGITFLGVLCA 469


>ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like, partial [Cucumis sativus]
          Length = 610

 Score =  189 bits (481), Expect = 2e-46
 Identities = 95/143 (66%), Positives = 110/143 (76%)
 Frame = -1

Query: 429 NGLIAGYANKGRFFDVLGAFKRMLVESGVRPNDATLVYVLSACSRLGALALGKWVHVYAK 250
           NGLI GYA+ G FF+VL  FKRML++  V PNDATLV VLSAC+RLGAL LGKWVHVYA 
Sbjct: 286 NGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAA 345

Query: 249 SNDLMKNVFVGNGLIDMYSKCGSIEAAVDVFNGMVSKDLITWNIVIGGLATHGRGTDALQ 70
           +     +++VGN LIDMYSKCG IE A++VF  M  KDLITWN +I GLATHG G DAL 
Sbjct: 346 TIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALT 405

Query: 69  VFDQMMKTGEKPDEITFVGVLCA 1
           +F QM   GEKPD ITF+GVLC+
Sbjct: 406 LFHQMKINGEKPDGITFIGVLCS 428



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/123 (31%), Positives = 63/123 (51%)
 Frame = -1

Query: 429 NGLIAGYANKGRFFDVLGAFKRMLVESGVRPNDATLVYVLSACSRLGALALGKWVHVYAK 250
           N +  GY +   + +V+  F +M     VRPN  T   VL +C+++GA   G+ +H    
Sbjct: 92  NAISRGYFHNAFYREVVFLFGKMK-SMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVI 150

Query: 249 SNDLMKNVFVGNGLIDMYSKCGSIEAAVDVFNGMVSKDLITWNIVIGGLATHGRGTDALQ 70
              L  N FV   LID+YS   +I +A  +F GM+ ++++ W  +I G     R   A +
Sbjct: 151 KGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARR 210

Query: 69  VFD 61
           +FD
Sbjct: 211 LFD 213