BLASTX nr result

ID: Cimicifuga21_contig00022876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022876
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302974.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-33
ref|XP_002275235.1| PREDICTED: probable ADP-ribosylation factor ...    93   1e-33
ref|XP_002282569.1| PREDICTED: probable ADP-ribosylation factor ...    94   3e-33
emb|CAN69475.1| hypothetical protein VITISV_014376 [Vitis vinife...    94   3e-33
gb|ACJ83963.1| unknown [Medicago truncatula] gi|388509716|gb|AFK...    98   1e-32

>ref|XP_002302974.1| predicted protein [Populus trichocarpa] gi|222844700|gb|EEE82247.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score = 97.1 bits (240), Expect(3) = 1e-33
 Identities = 42/54 (77%), Positives = 52/54 (96%)
 Frame = -1

Query: 872 KKLKTRVVKKNVNPEWNEELTLSVEDPDLPVKLKVYDKDTFTIDDKMGDAEFDI 711
           +KLKTRV+K+N+NPEWN++LTLSV DP+LPV +KVYDKDTF++DDKMGDAEFDI
Sbjct: 37  QKLKTRVIKQNINPEWNDDLTLSVVDPNLPVLIKVYDKDTFSLDDKMGDAEFDI 90



 Score = 60.1 bits (144), Expect(3) = 1e-33
 Identities = 25/35 (71%), Positives = 32/35 (91%)
 Frame = -2

Query: 691 LPNGTIITKVVPSREICLAEESCIIWSNGKVVQHV 587
           LPNGTII K+ PSRE CLAEESCI+W++GKV+Q++
Sbjct: 104 LPNGTIIRKIQPSRENCLAEESCIVWASGKVIQNM 138



 Score = 34.3 bits (77), Expect(3) = 1e-33
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -3

Query: 594 NTCLRLRNAETGVVVLELHWIDISTSKNM 508
           N  LRLR+ E+G V L+L WIDI  S+ M
Sbjct: 137 NMFLRLRHVESGEVELQLEWIDIPGSRGM 165


>ref|XP_002275235.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11 [Vitis vinifera]
           gi|296087148|emb|CBI33522.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score = 93.2 bits (230), Expect(3) = 1e-33
 Identities = 42/54 (77%), Positives = 50/54 (92%)
 Frame = -1

Query: 872 KKLKTRVVKKNVNPEWNEELTLSVEDPDLPVKLKVYDKDTFTIDDKMGDAEFDI 711
           +KLKTRVV KNVNPEWNE+LTLSV+D +LPVK+ VYD+DTF++DDKMGDAEF I
Sbjct: 37  QKLKTRVVNKNVNPEWNEDLTLSVDDTNLPVKIFVYDRDTFSLDDKMGDAEFQI 90



 Score = 62.4 bits (150), Expect(3) = 1e-33
 Identities = 28/41 (68%), Positives = 36/41 (87%)
 Frame = -2

Query: 709 RLLKSGLPNGTIITKVVPSREICLAEESCIIWSNGKVVQHV 587
           R+  +GLP+GTIIT+V P+RE CLAEESCIIW+ GKVVQ++
Sbjct: 98  RMELNGLPSGTIITRVQPNRENCLAEESCIIWTEGKVVQNL 138



 Score = 35.4 bits (80), Expect(3) = 1e-33
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -3

Query: 594 NTCLRLRNAETGVVVLELHWIDISTSKNM 508
           N  LRLRN E+G V L+L WIDI  S+ +
Sbjct: 137 NLVLRLRNVESGEVELQLQWIDIPGSRGL 165


>ref|XP_002282569.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11-like [Vitis vinifera]
          Length = 181

 Score = 93.6 bits (231), Expect(3) = 3e-33
 Identities = 42/54 (77%), Positives = 49/54 (90%)
 Frame = -1

Query: 872 KKLKTRVVKKNVNPEWNEELTLSVEDPDLPVKLKVYDKDTFTIDDKMGDAEFDI 711
           +KLKTRV+KKNVNPEWNE+LTLS+ DP+LP+KL VYD DTF+ DDKMGDAEF I
Sbjct: 53  QKLKTRVMKKNVNPEWNEDLTLSISDPNLPIKLTVYDHDTFSKDDKMGDAEFTI 106



 Score = 59.3 bits (142), Expect(3) = 3e-33
 Identities = 25/41 (60%), Positives = 35/41 (85%)
 Frame = -2

Query: 709 RLLKSGLPNGTIITKVVPSREICLAEESCIIWSNGKVVQHV 587
           R+   GLP+GTII++V PSR+ CLAEESCI+W++G+VVQ +
Sbjct: 114 RMHLEGLPSGTIISRVQPSRQNCLAEESCIVWTDGRVVQDI 154



 Score = 37.0 bits (84), Expect(3) = 3e-33
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = -3

Query: 588 CLRLRNAETGVVVLELHWIDISTSKNM 508
           CLRLRN E G V L+L WID+  SK +
Sbjct: 155 CLRLRNVECGEVELQLQWIDLPGSKGL 181


>emb|CAN69475.1| hypothetical protein VITISV_014376 [Vitis vinifera]
           gi|297734335|emb|CBI15582.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score = 93.6 bits (231), Expect(3) = 3e-33
 Identities = 42/54 (77%), Positives = 49/54 (90%)
 Frame = -1

Query: 872 KKLKTRVVKKNVNPEWNEELTLSVEDPDLPVKLKVYDKDTFTIDDKMGDAEFDI 711
           +KLKTRV+KKNVNPEWNE+LTLS+ DP+LP+KL VYD DTF+ DDKMGDAEF I
Sbjct: 37  QKLKTRVMKKNVNPEWNEDLTLSISDPNLPIKLTVYDHDTFSKDDKMGDAEFTI 90



 Score = 59.3 bits (142), Expect(3) = 3e-33
 Identities = 25/41 (60%), Positives = 35/41 (85%)
 Frame = -2

Query: 709 RLLKSGLPNGTIITKVVPSREICLAEESCIIWSNGKVVQHV 587
           R+   GLP+GTII++V PSR+ CLAEESCI+W++G+VVQ +
Sbjct: 98  RMHLEGLPSGTIISRVQPSRQNCLAEESCIVWTDGRVVQDI 138



 Score = 37.0 bits (84), Expect(3) = 3e-33
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = -3

Query: 588 CLRLRNAETGVVVLELHWIDISTSKNM 508
           CLRLRN E G V L+L WID+  SK +
Sbjct: 139 CLRLRNVECGEVELQLQWIDLPGSKGL 165


>gb|ACJ83963.1| unknown [Medicago truncatula] gi|388509716|gb|AFK42924.1| unknown
           [Medicago truncatula]
          Length = 165

 Score = 98.2 bits (243), Expect(3) = 1e-32
 Identities = 54/81 (66%), Positives = 61/81 (75%), Gaps = 5/81 (6%)
 Frame = -1

Query: 926 LAFYHVVSCVLTFGLGMAK-KLKTRVVKKNVNPEWNEELTLSVEDPDLPVKLKVYDKDTF 750
           LA   VVS      + MAK KLKTRVVKKN+NPEWNE+LTLS+ DP  P+ L VYDKDTF
Sbjct: 18  LAIRDVVSSDPYVVIKMAKQKLKTRVVKKNLNPEWNEDLTLSISDPHTPIHLYVYDKDTF 77

Query: 749 TIDDKMGDAEFDI----EAVK 699
           ++DDKMGDAEFDI    EAVK
Sbjct: 78  SLDDKMGDAEFDIGPFFEAVK 98



 Score = 50.8 bits (120), Expect(3) = 1e-32
 Identities = 21/37 (56%), Positives = 30/37 (81%)
 Frame = -2

Query: 697 SGLPNGTIITKVVPSREICLAEESCIIWSNGKVVQHV 587
           +GLPN  I+T+V PSR+ CLAEES I+W +GK+ Q++
Sbjct: 102 AGLPNEAIVTRVQPSRQNCLAEESHIVWKDGKIFQNM 138



 Score = 38.5 bits (88), Expect(3) = 1e-32
 Identities = 18/29 (62%), Positives = 20/29 (68%)
 Frame = -3

Query: 594 NTCLRLRNAETGVVVLELHWIDISTSKNM 508
           N  LRLRN E G V L+LHW+DI  SK M
Sbjct: 137 NMVLRLRNVECGEVELQLHWVDIPGSKVM 165


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