BLASTX nr result

ID: Cimicifuga21_contig00022852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022852
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB53329.1| Rb7 [Solanum lycopersicum]                             233   9e-60
gb|AAB67881.1| membrane channel protein [Solanum tuberosum]           226   1e-57
sp|P24422.2|TIP2_TOBAC RecName: Full=Probable aquaporin TIP-type...   225   3e-57
sp|P21653.1|TIP1_TOBAC RecName: Full=Probable aquaporin TIP-type...   225   3e-57
sp|P33560.1|TIP_ANTMA RecName: Full=Probable aquaporin TIP-type;...   223   1e-56

>gb|AAB53329.1| Rb7 [Solanum lycopersicum]
          Length = 250

 Score =  233 bits (595), Expect = 9e-60
 Identities = 119/135 (88%), Positives = 126/135 (93%)
 Frame = +2

Query: 2   LALGSFGDSFSGGALKAYLAEFISTLLFVFAGVGSAIAFNKLTGGAALDPAGLVAIALAH 181
           +A GS GDS S G+LKAYLAEFI+TLLFVFAGVGSAIAFNKLT GAALDPAGLVAIA+AH
Sbjct: 4   IAFGSIGDSLSVGSLKAYLAEFIATLLFVFAGVGSAIAFNKLTSGAALDPAGLVAIAVAH 63

Query: 182 AFALFVGVSMAANISGGHLNPAVTFGLAVGGHITIFTGILYWVAQLLGSTVACLLLKFVT 361
           AFALFVGVSMAANISGGHLNPAVT GLAVGG+ITI TG+ YWVAQLLGSTVACLLLK+VT
Sbjct: 64  AFALFVGVSMAANISGGHLNPAVTLGLAVGGNITILTGLFYWVAQLLGSTVACLLLKYVT 123

Query: 362 NGEAVPTHGVAAGMS 406
           NG AVPTHGVAAGMS
Sbjct: 124 NGLAVPTHGVAAGMS 138


>gb|AAB67881.1| membrane channel protein [Solanum tuberosum]
          Length = 250

 Score =  226 bits (577), Expect = 1e-57
 Identities = 115/135 (85%), Positives = 124/135 (91%)
 Frame = +2

Query: 2   LALGSFGDSFSGGALKAYLAEFISTLLFVFAGVGSAIAFNKLTGGAALDPAGLVAIALAH 181
           +A GS GDS S G+LKAYLAEFI+TLLFVFAGVGSAIA+NKLT  AALDPAGLVAIA+AH
Sbjct: 4   IAFGSIGDSLSVGSLKAYLAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAIAVAH 63

Query: 182 AFALFVGVSMAANISGGHLNPAVTFGLAVGGHITIFTGILYWVAQLLGSTVACLLLKFVT 361
           AFALFVGVSMAANISGGHLNPAVT GLAVGG+IT  TG+ YWVAQLLGSTVACLLLK+VT
Sbjct: 64  AFALFVGVSMAANISGGHLNPAVTLGLAVGGNITTLTGLFYWVAQLLGSTVACLLLKYVT 123

Query: 362 NGEAVPTHGVAAGMS 406
           NG AVPTHGVAAGM+
Sbjct: 124 NGLAVPTHGVAAGMN 138


>sp|P24422.2|TIP2_TOBAC RecName: Full=Probable aquaporin TIP-type RB7-18C; AltName:
           Full=RT-TIP; AltName: Full=TobRB7; AltName:
           Full=Tonoplast intrinsic protein, root-specific RB7-18C
          Length = 250

 Score =  225 bits (574), Expect = 3e-57
 Identities = 112/135 (82%), Positives = 125/135 (92%)
 Frame = +2

Query: 2   LALGSFGDSFSGGALKAYLAEFISTLLFVFAGVGSAIAFNKLTGGAALDPAGLVAIALAH 181
           +A GS GDSFS G+LKAY+AEFI+TLLFVFAGVGSAIA+NKLT  AALDPAGLVA+A+AH
Sbjct: 4   IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAH 63

Query: 182 AFALFVGVSMAANISGGHLNPAVTFGLAVGGHITIFTGILYWVAQLLGSTVACLLLKFVT 361
           AFALFVGVS+AANISGGHLNPAVT GLAVGG+ITI TG  YW+AQLLGSTVACLLLK+VT
Sbjct: 64  AFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVT 123

Query: 362 NGEAVPTHGVAAGMS 406
           NG AVPTHGVAAG++
Sbjct: 124 NGLAVPTHGVAAGLN 138


>sp|P21653.1|TIP1_TOBAC RecName: Full=Probable aquaporin TIP-type RB7-5A; AltName:
           Full=RT-TIP; AltName: Full=TobRB7; AltName:
           Full=Tonoplast intrinsic protein, root-specific RB7-5A
           gi|20011|emb|CAA38634.1| possible membrane channel
           protein [Nicotiana tabacum] gi|7580481|gb|AAB23597.2|
           root-specific gene regulator [Nicotiana tabacum]
          Length = 250

 Score =  225 bits (574), Expect = 3e-57
 Identities = 112/135 (82%), Positives = 125/135 (92%)
 Frame = +2

Query: 2   LALGSFGDSFSGGALKAYLAEFISTLLFVFAGVGSAIAFNKLTGGAALDPAGLVAIALAH 181
           +A GS GDSFS G+LKAY+AEFI+TLLFVFAGVGSAIA+NKLT  AALDPAGLVA+A+AH
Sbjct: 4   IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAH 63

Query: 182 AFALFVGVSMAANISGGHLNPAVTFGLAVGGHITIFTGILYWVAQLLGSTVACLLLKFVT 361
           AFALFVGVS+AANISGGHLNPAVT GLAVGG+ITI TG  YW+AQLLGSTVACLLLK+VT
Sbjct: 64  AFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVT 123

Query: 362 NGEAVPTHGVAAGMS 406
           NG AVPTHGVAAG++
Sbjct: 124 NGLAVPTHGVAAGLN 138


>sp|P33560.1|TIP_ANTMA RecName: Full=Probable aquaporin TIP-type; AltName: Full=Dark
           intrinsic protein; AltName: Full=Tonoplast intrinsic
           protein DiP gi|414088|emb|CAA49854.1| integral membrane
           protein [Antirrhinum majus]
          Length = 250

 Score =  223 bits (569), Expect = 1e-56
 Identities = 110/136 (80%), Positives = 124/136 (91%)
 Frame = +2

Query: 2   LALGSFGDSFSGGALKAYLAEFISTLLFVFAGVGSAIAFNKLTGGAALDPAGLVAIALAH 181
           +A GS GDSFS  ++KAY+AEFI+TLLFVFAGVGSAIA+NKLT  AALDPAGLVA+A+AH
Sbjct: 4   IAFGSIGDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAH 63

Query: 182 AFALFVGVSMAANISGGHLNPAVTFGLAVGGHITIFTGILYWVAQLLGSTVACLLLKFVT 361
           AFALFVGVSMAAN+SGGHLNPAVT GLAVGG+ITI TG+ YW+AQ LGSTVACLLLKFVT
Sbjct: 64  AFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVT 123

Query: 362 NGEAVPTHGVAAGMSS 409
           NG +VPTHGVAAGM +
Sbjct: 124 NGLSVPTHGVAAGMDA 139


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