BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022844
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi...   305   1e-80
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi...   283   3e-74
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi...   274   2e-71
ref|XP_002511921.1| pentatricopeptide repeat-containing protein,...   263   4e-68
ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|2...   258   1e-66

>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial [Vitis vinifera]
            gi|297745328|emb|CBI40408.3| unnamed protein product
            [Vitis vinifera]
          Length = 765

 Score =  305 bits (781), Expect = 1e-80
 Identities = 152/229 (66%), Positives = 181/229 (79%)
 Frame = +2

Query: 5    SRAGRLDDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDD 184
            S+AG+LD A  + SKMK AGF  D VS+NVLINGFC+K KLD+ YE+L +ME  GI+PD 
Sbjct: 532  SQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDG 591

Query: 185  VTYNTLISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFNL 364
            VTYNTLIS  SK+GDFST HR M+KM   GLVPTVVTYGALIH YC  G L EA++IF  
Sbjct: 592  VTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRD 651

Query: 365  MGGATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDTN 544
            M   +KVPPNTVIYNILI+SLC++ +++ ALSLMD MK KGV PN  T+NAMFKGL++ N
Sbjct: 652  MSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKN 711

Query: 545  CLEKAFKLMNDMNEQDINPDYVTMEILTEWLSAAGKTDKLRSFVQGHEV 691
             L KAF+LM+ M E   NPDY+TMEILTEWLSA G+T KL+SFVQG+EV
Sbjct: 712  WLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYEV 760



 Score =  135 bits (341), Expect = 1e-29
 Identities = 80/220 (36%), Positives = 123/220 (55%), Gaps = 6/220 (2%)
 Frame = +2

Query: 35  SIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDM---EMTG--IQPDDVTYNT 199
           ++ ++MK      + V++ +LIN  CK +++D+  E+ + M   E  G  ++PD +TYNT
Sbjct: 326 TLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNT 385

Query: 200 LISSLSKSGDFSTVHRWMEKMTDRG-LVPTVVTYGALIHGYCKAGKLKEALEIFNLMGGA 376
           LI  L K G        +E+M  +   +P  VTY  LI GYCKA  ++ A E+F+ M   
Sbjct: 386 LIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMN-K 444

Query: 377 TKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDTNCLEK 556
             VPPN V  N L+D +CK  ++  A+   + M+GKG+  N VTY A+ +   + N +EK
Sbjct: 445 DGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEK 504

Query: 557 AFKLMNDMNEQDINPDYVTMEILTEWLSAAGKTDKLRSFV 676
           A +L ++M E   +PD +    L   LS AGK D+  SFV
Sbjct: 505 AMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDR-ASFV 543



 Score =  125 bits (313), Expect = 2e-26
 Identities = 76/227 (33%), Positives = 112/227 (49%), Gaps = 1/227 (0%)
 Frame = +2

Query: 14   GRLDDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDDVTY 193
            GR++ A    ++M+  G   +AV+Y  LI  FC    ++K  EL D+M   G  PD + Y
Sbjct: 465  GRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVY 524

Query: 194  NTLISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFNLMGG 373
             TLIS LS++G        + KM + G  P +V++  LI+G+C+  KL EA E+   M  
Sbjct: 525  YTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMEN 584

Query: 374  ATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDTNCLE 553
            A  + P+ V YN LI    K      A  LM  M  +G+VP VVTY A+         L+
Sbjct: 585  A-GIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLD 643

Query: 554  KAFKLMNDMNE-QDINPDYVTMEILTEWLSAAGKTDKLRSFVQGHEV 691
            +A K+  DM+    + P+ V   IL   L    + D   S +   +V
Sbjct: 644  EAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKV 690



 Score =  123 bits (308), Expect = 7e-26
 Identities = 65/215 (30%), Positives = 114/215 (53%), Gaps = 1/215 (0%)
 Frame = +2

Query: 8    RAGRLDDACSIASKMKNAGFFL-DAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDD 184
            + GR ++   +  +M++    + + V+YN LI+G+CK   ++   EL D M   G+ P+ 
Sbjct: 392  KVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNV 451

Query: 185  VTYNTLISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFNL 364
            VT NTL+  + K G  +    +  +M  +GL    VTY ALI  +C    +++A+E+F+ 
Sbjct: 452  VTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDE 511

Query: 365  MGGATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDTN 544
            M  A    P+ ++Y  LI  L +  K++ A  ++  MK  G  P++V++N +  G    N
Sbjct: 512  MLEA-GCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKN 570

Query: 545  CLEKAFKLMNDMNEQDINPDYVTMEILTEWLSAAG 649
             L++A++++ +M    I PD VT   L    S  G
Sbjct: 571  KLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTG 605



 Score =  115 bits (288), Expect = 1e-23
 Identities = 63/220 (28%), Positives = 117/220 (53%), Gaps = 5/220 (2%)
 Frame = +2

Query: 8   RAGRLDDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDDV 187
           RA   ++   + SK      F +++    LI+  C+  + D+ +++L  +   G   +  
Sbjct: 247 RAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAA 306

Query: 188 TYNTLISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFNLM 367
           + N L+++L ++ +F  ++  + +M +  + P VVT+G LI+  CK  ++ EALE+F  M
Sbjct: 307 SCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM 366

Query: 368 GGATK----VPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGK-GVVPNVVTYNAMFKGL 532
            G       V P+ + YN LID LCK  + E+ L L++ M+ +   +PN VTYN +  G 
Sbjct: 367 NGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGY 426

Query: 533 RDTNCLEKAFKLMNDMNEQDINPDYVTMEILTEWLSAAGK 652
              + +E A +L + MN+  + P+ VT+  L + +   G+
Sbjct: 427 CKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGR 466


>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Cucumis sativus]
            gi|449475521|ref|XP_004154479.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  283 bits (725), Expect = 3e-74
 Identities = 142/228 (62%), Positives = 175/228 (76%), Gaps = 2/228 (0%)
 Frame = +2

Query: 5    SRAGRLDDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDD 184
            ++AGRLDDA S+ SK+K AGF LD V YNVLI+ FCKK KLD+  E L++ME+ G++PD 
Sbjct: 379  AQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDS 438

Query: 185  VTYNTLISSLSKSGDFSTVHRWMEKMTDR-GLVPTVVTYGALIHGYCKAGKLKEALEIFN 361
            VTYNTLIS  SK G+F   H++M+KMT+  GL PTV TYGALIH YC    + EA++IF 
Sbjct: 439  VTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFK 498

Query: 362  LMGG-ATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRD 538
             M   A+KVPPNTVIYNILIDSLCK+ ++  ALSL+D MK +GV+PN  TYN++FK LRD
Sbjct: 499  EMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRD 558

Query: 539  TNCLEKAFKLMNDMNEQDINPDYVTMEILTEWLSAAGKTDKLRSFVQG 682
             N L+KAFKLM+ M EQ  NPDY+TMEILTEWLSA G+  KL+ F QG
Sbjct: 559  KNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITKLKKFTQG 606



 Score =  128 bits (321), Expect = 2e-27
 Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 5/208 (2%)
 Frame = +2

Query: 23  DDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDDVTYNTL 202
           D+   + SK      F D ++   LI+  C+    +  + +LD++ M     D    N L
Sbjct: 99  DEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNAL 158

Query: 203 ISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFNLMGGATK 382
           ++ L K+ +F  ++  M KM D  + PTV+T+G LI+  CK  ++ +ALE+F  M G  +
Sbjct: 159 LTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKE 218

Query: 383 -----VPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDTNC 547
                V P+T++YN LID LCK  + E+AL LM  M+     P   T+N +  G   +  
Sbjct: 219 ETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGE 278

Query: 548 LEKAFKLMNDMNEQDINPDYVTMEILTE 631
           +E A KL N+M    I P+ +T+  L +
Sbjct: 279 IEVAHKLFNEMENAQIEPNVITLNTLVD 306



 Score =  110 bits (274), Expect = 6e-22
 Identities = 61/224 (27%), Positives = 111/224 (49%)
 Frame = +2

Query: 8   RAGRLDDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDDV 187
           + GR ++A  +  KM++        ++N LING+C+  +++  ++L ++ME   I+P+ +
Sbjct: 240 KVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVI 299

Query: 188 TYNTLISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFNLM 367
           T NTL+  + K    ST   +   M  +GL    VTY   I+ +C    + +A+E  + M
Sbjct: 300 TLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEM 359

Query: 368 GGATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDTNC 547
                  P+ V+Y  LI  L +  +++DA S++  +K  G   + V YN +       N 
Sbjct: 360 -SKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNK 418

Query: 548 LEKAFKLMNDMNEQDINPDYVTMEILTEWLSAAGKTDKLRSFVQ 679
           L++A + +N+M    + PD VT   L  + S  G       F++
Sbjct: 419 LDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMK 462



 Score =  105 bits (263), Expect = 1e-20
 Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 6/231 (2%)
 Frame = +2

Query: 17  RLDDACSIASKMKN----AGFFL--DAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQP 178
           R+DDA  +  KMK        F+  D + YN LI+G CK  + ++   L+  M      P
Sbjct: 202 RIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAP 261

Query: 179 DDVTYNTLISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIF 358
              T+N LI+   +SG+    H+   +M +  + P V+T   L+ G CK  ++  A+E F
Sbjct: 262 TTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFF 321

Query: 359 NLMGGATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRD 538
            +M     +  N V Y + I++ C    M  A+  +D M   G  P+ V Y  +  GL  
Sbjct: 322 RVM-QQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQ 380

Query: 539 TNCLEKAFKLMNDMNEQDINPDYVTMEILTEWLSAAGKTDKLRSFVQGHEV 691
              L+ A  +++ + E     D V   +L        K D+ + ++   E+
Sbjct: 381 AGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMEL 431



 Score = 99.8 bits (247), Expect = 8e-19
 Identities = 71/264 (26%), Positives = 111/264 (42%), Gaps = 41/264 (15%)
 Frame = +2

Query: 8   RAGRLDDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDDV 187
           R+G  + A +I   +       DA   N L+ G  K ++  K+  L+  M+   IQP  +
Sbjct: 129 RSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVI 188

Query: 188 T-----------------------------------------YNTLISSLSKSGDFSTVH 244
           T                                         YNTLI  L K G      
Sbjct: 189 TFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEAL 248

Query: 245 RWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFNLMGGATKVPPNTVIYNILIDS 424
             M KM      PT  T+  LI+GYC++G+++ A ++FN M  A ++ PN +  N L+D 
Sbjct: 249 CLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENA-QIEPNVITLNTLVDG 307

Query: 425 LCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDTNCLEKAFKLMNDMNEQDINPD 604
           +CK  ++  A+     M+ KG+  N VTY        + N + KA + +++M++    PD
Sbjct: 308 MCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPD 367

Query: 605 YVTMEILTEWLSAAGKTDKLRSFV 676
            V    L   L+ AG+ D   S V
Sbjct: 368 AVVYYTLICGLAQAGRLDDASSVV 391



 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 53/197 (26%), Positives = 101/197 (51%)
 Frame = +2

Query: 2   FSRAGRLDDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPD 181
           + R+G ++ A  + ++M+NA    + ++ N L++G CK  ++    E    M+  G++ +
Sbjct: 273 YCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGN 332

Query: 182 DVTYNTLISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFN 361
           +VTY   I++     + +    ++++M+  G  P  V Y  LI G  +AG+L +A  + +
Sbjct: 333 NVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVS 392

Query: 362 LMGGATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDT 541
            +  A     + V YN+LI   CK+ K++ A   ++ M+  GV P+ VTYN +       
Sbjct: 393 KLKEA-GFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKI 451

Query: 542 NCLEKAFKLMNDMNEQD 592
              + A K M  M E++
Sbjct: 452 GNFKLAHKFMKKMTEEE 468


>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Glycine max]
          Length = 746

 Score =  274 bits (701), Expect = 2e-71
 Identities = 132/226 (58%), Positives = 171/226 (75%)
 Frame = +2

Query: 11   AGRLDDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDDVT 190
            AGR++DA  + SK+K AGF LD   YNVLI+GFCKKKKL++VYELL +ME TG++PD +T
Sbjct: 511  AGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTIT 570

Query: 191  YNTLISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFNLMG 370
            YNTLIS L K+GDF+T  + MEKM   GL P+VVTYGA+IH YC    + E ++IF  M 
Sbjct: 571  YNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMC 630

Query: 371  GATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDTNCL 550
              +KVPPNTVIYNILID+LC+   ++ A+SLM+ MK K V PN  TYNA+ KG+RD   L
Sbjct: 631  STSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKML 690

Query: 551  EKAFKLMNDMNEQDINPDYVTMEILTEWLSAAGKTDKLRSFVQGHE 688
             KAF+LM+ M E+   PDY+TME+LTEWLSA G+ +KL+ FV+G++
Sbjct: 691  HKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQ 736



 Score =  119 bits (298), Expect = 1e-24
 Identities = 68/222 (30%), Positives = 113/222 (50%), Gaps = 6/222 (2%)
 Frame = +2

Query: 26  DACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDDVTYNTLI 205
           +   + +K+   G F D      L+   C  +K    +E+L  +   G   D  + N L+
Sbjct: 229 EVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALL 288

Query: 206 SSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFNLMGGA--- 376
           + L +  D   ++  + +M  R + P+VVT+G L++  CKA ++ EAL++F+ + G    
Sbjct: 289 TWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGS 348

Query: 377 --TKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMK-GKGVVPNVVTYNAMFKGLRDTNC 547
               V P+ V++N LID LCK  K ED LSL++ MK G    PN VTYN +  G      
Sbjct: 349 NWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGN 408

Query: 548 LEKAFKLMNDMNEQDINPDYVTMEILTEWLSAAGKTDKLRSF 673
            ++A +L   MNE+ + P+ +T+  L + L   G+  +   F
Sbjct: 409 FDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEF 450



 Score =  113 bits (282), Expect = 7e-23
 Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
 Frame = +2

Query: 8    RAGRLDDACSIASKMKNAGFFL-DAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDD 184
            + G+ +D  S+  +MK       + V+YN LI+GF K    D+ +EL   M   G+QP+ 
Sbjct: 369  KVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNV 428

Query: 185  VTYNTLISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFNL 364
            +T NTL+  L K G       +  +M  +GL     TY ALI  +C    +  A++ F  
Sbjct: 429  ITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEE 488

Query: 365  MGGATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDTN 544
            M  ++   P+ V+Y  LI  LC   +M DA  ++  +K  G   +   YN +  G     
Sbjct: 489  M-LSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKK 547

Query: 545  CLEKAFKLMNDMNEQDINPDYVTMEILTEWLSAAG 649
             LE+ ++L+ +M E  + PD +T   L  +L   G
Sbjct: 548  KLERVYELLTEMEETGVKPDTITYNTLISYLGKTG 582



 Score =  107 bits (267), Expect = 4e-21
 Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
 Frame = +2

Query: 80  VSYNVLINGFCKKKKLDKVYELLDDME------MTGIQPDDVTYNTLISSLSKSGDFSTV 241
           V++ +L+N  CK +++D+  ++ D +         G++PD V +NTLI  L K G     
Sbjct: 317 VTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDG 376

Query: 242 HRWMEKMTDRGLV-PTVVTYGALIHGYCKAGKLKEALEIFNLMGGATKVPPNTVIYNILI 418
              +E+M    +  P  VTY  LI G+ KAG    A E+F  M     V PN +  N L+
Sbjct: 377 LSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMN-EEGVQPNVITLNTLV 435

Query: 419 DSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDTNCLEKAFKLMNDMNEQDIN 598
           D LCK  ++  A+   + MKGKG+  N  TY A+       N + +A +   +M     +
Sbjct: 436 DGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCS 495

Query: 599 PDYVTMEILTEWLSAAGK 652
           PD V    L   L  AG+
Sbjct: 496 PDAVVYYSLISGLCIAGR 513



 Score =  106 bits (265), Expect = 6e-21
 Identities = 60/204 (29%), Positives = 102/204 (50%)
 Frame = +2

Query: 2    FSRAGRLDDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPD 181
            F +AG  D A  +  +M   G   + ++ N L++G CK  ++ +  E  ++M+  G++ +
Sbjct: 403  FFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGN 462

Query: 182  DVTYNTLISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFN 361
              TY  LIS+     + +   +  E+M   G  P  V Y +LI G C AG++ +A  + +
Sbjct: 463  AATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVS 522

Query: 362  LMGGATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDT 541
             +  A     +   YN+LI   CK+KK+E    L+  M+  GV P+ +TYN +   L  T
Sbjct: 523  KLKLA-GFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKT 581

Query: 542  NCLEKAFKLMNDMNEQDINPDYVT 613
                 A K+M  M ++ + P  VT
Sbjct: 582  GDFATASKVMEKMIKEGLRPSVVT 605



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 6/194 (3%)
 Frame = +2

Query: 62  GFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDDVTYNTLISSLSKSGDFSTV 241
           G  +DA S N L+    + + + ++ ELL +ME   I+P  VT+  L++ L K+      
Sbjct: 276 GGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEA 335

Query: 242 HRWMEKMTDRG------LVPTVVTYGALIHGYCKAGKLKEALEIFNLMGGATKVPPNTVI 403
            +  +++  +G      + P VV +  LI G CK GK ++ L +   M       PNTV 
Sbjct: 336 LQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVT 395

Query: 404 YNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDTNCLEKAFKLMNDMN 583
           YN LID   K    + A  L   M  +GV PNV+T N +  GL     + +A +  N+M 
Sbjct: 396 YNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMK 455

Query: 584 EQDINPDYVTMEIL 625
            + +  +  T   L
Sbjct: 456 GKGLKGNAATYTAL 469


>ref|XP_002511921.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549101|gb|EEF50590.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 248

 Score =  263 bits (672), Expect = 4e-68
 Identities = 131/222 (59%), Positives = 162/222 (72%), Gaps = 1/222 (0%)
 Frame = +2

Query: 5   SRAGRLDDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDD 184
           S+A R+DDA S+ +K+K AGF  D V YN+LI GFC K +LDK  E+L+DME  G++PD 
Sbjct: 21  SQARRMDDAASVLTKLKEAGFCPDIVCYNILIGGFCNKNRLDKAREMLNDMEEAGLEPDT 80

Query: 185 VTYNTLISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFNL 364
           +TYNTLIS   K GD    HR M++M   GL PTVVTYG+LIH YC  G + EA++IF  
Sbjct: 81  ITYNTLISYFGKIGDIKVAHRMMKQMIKDGLQPTVVTYGSLIHAYCLNGNVDEAMKIFKA 140

Query: 365 M-GGATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDT 541
           M   A++V PN VIYNILIDSLC+   +E ALSLMD M+ KGV PN  TYNAMFKGLR+ 
Sbjct: 141 MDAAASRVAPNNVIYNILIDSLCENNDIELALSLMDDMRVKGVKPNTGTYNAMFKGLRER 200

Query: 542 NCLEKAFKLMNDMNEQDINPDYVTMEILTEWLSAAGKTDKLR 667
             L +A +LM+ M EQ  NPDY+TMEILTEWLSA G+T+KL+
Sbjct: 201 KWLNQALELMDRMMEQPCNPDYITMEILTEWLSAVGETEKLK 242



 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 29/87 (33%), Positives = 50/87 (57%)
 Frame = +2

Query: 389 PNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDTNCLEKAFKL 568
           P+ ++Y  LI  L + ++M+DA S++  +K  G  P++V YN +  G  + N L+KA ++
Sbjct: 8   PDAMVYYKLISGLSQARRMDDAASVLTKLKEAGFCPDIVCYNILIGGFCNKNRLDKAREM 67

Query: 569 MNDMNEQDINPDYVTMEILTEWLSAAG 649
           +NDM E  + PD +T   L  +    G
Sbjct: 68  LNDMEEAGLEPDTITYNTLISYFGKIG 94


>ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|222861600|gb|EEE99142.1|
            predicted protein [Populus trichocarpa]
          Length = 775

 Score =  258 bits (660), Expect = 1e-66
 Identities = 129/237 (54%), Positives = 164/237 (69%)
 Frame = +2

Query: 2    FSRAGRLDDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPD 181
            FS+AGR+ DA  + +++K  G   D V YN LI GFC+  K  +V+E+L +ME  G++PD
Sbjct: 534  FSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPD 593

Query: 182  DVTYNTLISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFN 361
             +TYNTLI+  SK+GD     + M KM   G+VPTV TYGA+I+ YC  G   EA+EIF 
Sbjct: 594  TITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFK 653

Query: 362  LMGGATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDT 541
             M  A+KVPPNTVIYNILI+SLCK  K++ A+SLM+ MK  GV PN  TYNA+FKGLRD 
Sbjct: 654  DMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDE 713

Query: 542  NCLEKAFKLMNDMNEQDINPDYVTMEILTEWLSAAGKTDKLRSFVQGHEVCEPTHTK 712
              LEK F+ M+ M E   NPDY+TMEILTEWLSA G+ ++L+ FV G EV   T  K
Sbjct: 714  KDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGCEVSSSTAQK 770



 Score =  127 bits (319), Expect = 4e-27
 Identities = 67/225 (29%), Positives = 119/225 (52%), Gaps = 8/225 (3%)
 Frame = +2

Query: 23  DDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDDVTYNTL 202
           D+  ++  K    G  + +     LI   C+ +K ++ ++L  +M   G   +    N+L
Sbjct: 252 DEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSL 311

Query: 203 ISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFNLMGG--- 373
           ++ L++ G+F+ ++  MEKM +  + P VVT+G LI+  CK  ++ +ALE+   M G   
Sbjct: 312 LTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKE 371

Query: 374 ----ATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKG-KGVVPNVVTYNAMFKGLRD 538
               +  V P+ VIYN LID LCK  + ++ L LM+ M+  KG  P+ +TYN +  G   
Sbjct: 372 SGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCK 431

Query: 539 TNCLEKAFKLMNDMNEQDINPDYVTMEILTEWLSAAGKTDKLRSF 673
              +EK  +L ++MN++ + P+ VT+  L   +   G+     +F
Sbjct: 432 AGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNF 476



 Score =  126 bits (317), Expect = 6e-27
 Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 3/217 (1%)
 Frame = +2

Query: 8    RAGRLDDACSIASKMKNA-GFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPDD 184
            + GR  +   +  +M++  G   D ++YN LI+GFCK  +++K  EL D+M   G+ P+ 
Sbjct: 395  KVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNV 454

Query: 185  VTYNTLISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFN- 361
            VT NTL+  + ++G  S+   +  +   RG+    VTY ALI+ +C     ++A+E+FN 
Sbjct: 455  VTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNE 514

Query: 362  -LMGGATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRD 538
             L  G +   P+ ++Y  LI    +  +M DA  ++  +K  G+ P+ V YN +  G   
Sbjct: 515  MLKSGCS---PDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCR 571

Query: 539  TNCLEKAFKLMNDMNEQDINPDYVTMEILTEWLSAAG 649
            TN   + F+++ +M E  + PD +T   L  + S  G
Sbjct: 572  TNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNG 608



 Score =  115 bits (289), Expect = 1e-23
 Identities = 68/225 (30%), Positives = 112/225 (49%), Gaps = 9/225 (4%)
 Frame = +2

Query: 5   SRAGRLDDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDME-------- 160
           +R G  +    +  KM       + V++ +LIN  CK +++D   E+L+ M         
Sbjct: 316 AREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGI 375

Query: 161 MTGIQPDDVTYNTLISSLSKSGDFSTVHRWMEKM-TDRGLVPTVVTYGALIHGYCKAGKL 337
              ++PD V YNTLI  L K G        ME+M + +G  P  +TY  LI G+CKAG++
Sbjct: 376 SVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEI 435

Query: 338 KEALEIFNLMGGATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNA 517
           ++  E+F+ M     V PN V  N L+  +C+  ++  A++     + +G+  + VTY A
Sbjct: 436 EKGKELFDEMN-KEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTA 494

Query: 518 MFKGLRDTNCLEKAFKLMNDMNEQDINPDYVTMEILTEWLSAAGK 652
           +     + N  EKA +L N+M +   +PD +    L    S AG+
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGR 539



 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 50/204 (24%), Positives = 91/204 (44%)
 Frame = +2

Query: 2    FSRAGRLDDACSIASKMKNAGFFLDAVSYNVLINGFCKKKKLDKVYELLDDMEMTGIQPD 181
            F +AG ++    +  +M   G   + V+ N L+ G C+  ++        + +  G++ D
Sbjct: 429  FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGD 488

Query: 182  DVTYNTLISSLSKSGDFSTVHRWMEKMTDRGLVPTVVTYGALIHGYCKAGKLKEALEIFN 361
             VTY  LI++     +F        +M   G  P  + Y  LI G+ +AG++ +A  +  
Sbjct: 489  AVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLA 548

Query: 362  LMGGATKVPPNTVIYNILIDSLCKEKKMEDALSLMDGMKGKGVVPNVVTYNAMFKGLRDT 541
             +     + P+TV YN LI   C+  K      ++  M+  G+ P+ +TYN +       
Sbjct: 549  EL-KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKN 607

Query: 542  NCLEKAFKLMNDMNEQDINPDYVT 613
              L+ A K+M  M +  + P   T
Sbjct: 608  GDLKFAQKVMRKMIKAGVVPTVAT 631