BLASTX nr result

ID: Cimicifuga21_contig00022836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022836
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282109.1| PREDICTED: uncharacterized protein LOC100264...   337   2e-90
ref|XP_002512512.1| conserved hypothetical protein [Ricinus comm...   325   8e-87
ref|XP_002872241.1| hypothetical protein ARALYDRAFT_489516 [Arab...   318   1e-84
ref|XP_002318950.1| predicted protein [Populus trichocarpa] gi|2...   318   1e-84
ref|NP_198037.3| uncharacterized protein [Arabidopsis thaliana] ...   317   2e-84

>ref|XP_002282109.1| PREDICTED: uncharacterized protein LOC100264846 [Vitis vinifera]
           gi|296089778|emb|CBI39597.3| unnamed protein product
           [Vitis vinifera]
          Length = 1002

 Score =  337 bits (865), Expect = 2e-90
 Identities = 168/267 (62%), Positives = 193/267 (72%), Gaps = 3/267 (1%)
 Frame = -1

Query: 792 MGFMSRRVVPVCGQMCVCCPALRSRSRQPVKRYKKLLADIFPKSPDAPPNERKIVKLCEY 613
           MGF+SRR+ P CG MCVCCPALRSRSRQPVKRYKKLLA+IFPKS D PPNERKIVKLCEY
Sbjct: 1   MGFISRRIFPACGSMCVCCPALRSRSRQPVKRYKKLLAEIFPKSIDGPPNERKIVKLCEY 60

Query: 612 AAKNPFRIPKIAQHLERRIYKELVRNHHFNFITVAMEAYNKFLFICKHHMPYFAAXXXXX 433
           AAKNPFRIPKIA++LE R YKEL R  H  FI +  EAYNK L +CK  M YFA      
Sbjct: 61  AAKNPFRIPKIAKYLEERCYKEL-RCEHIKFIAIVTEAYNKLLCMCKDQMAYFAVSLLNV 119

Query: 432 XXXXLDNTNQHHLSILGCQTLTSFVYSQEDGTYARNIEILVPKVCMMAREVGDEHSKCCL 253
               LD   +  + ILGCQTLT F+Y Q D TY  NIE  V KVCM+ARE GDE     L
Sbjct: 120 VSELLDKPKKDAMRILGCQTLTRFIYCQADSTYTHNIENFVRKVCMLAREAGDEQQTSTL 179

Query: 252 RASSLQCISSMVWFMTEFSHFFAGFDDIVHVTLDNYEPDVCHVDNDESGETHHNWVADVI 73
           +ASSLQC+S+MVWFM EFS  F+ FD+IVHVTLDNYE D  + ++DE GE HHNWV +V+
Sbjct: 180 KASSLQCLSAMVWFMAEFSLIFSDFDEIVHVTLDNYERDTHNGEDDERGEPHHNWVDEVV 239

Query: 72  RSEARGAV---SDVSQSYMIIWPHSEK 1
           R E RG     S++S S  +I P +EK
Sbjct: 240 RCEGRGGAGVGSEISPSCPVIRPQTEK 266


>ref|XP_002512512.1| conserved hypothetical protein [Ricinus communis]
           gi|223548473|gb|EEF49964.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 972

 Score =  325 bits (834), Expect = 8e-87
 Identities = 169/266 (63%), Positives = 187/266 (70%), Gaps = 2/266 (0%)
 Frame = -1

Query: 792 MGFMSRRVVPVCGQMCVCCPALRSRSRQPVKRYKKLLADIFPKSPDAPPNERKIVKLCEY 613
           MGF+SR++ P C  MCVCCPALRSRSRQPVKRYKKLLA+IFPKS D PPNERKIVKLCEY
Sbjct: 47  MGFVSRKIFPACESMCVCCPALRSRSRQPVKRYKKLLAEIFPKS-DGPPNERKIVKLCEY 105

Query: 612 AAKNPFRIPKIAQHLERRIYKELVRNHHFNFITVAMEAYNKFLFICKHHMPYFAAXXXXX 433
           AAKNPFRIPKIA++LE R  KEL R+ H  FI    E YNK L +CK  M YFA      
Sbjct: 106 AAKNPFRIPKIAKYLEERCCKEL-RSEHIKFINTVTETYNKLLCVCKEQMAYFAVSLLNV 164

Query: 432 XXXXLDNTNQHHLSILGCQTLTSFVYSQEDGTYARNIEILVPKVCMMAREVGDEHSKCCL 253
               LD   Q  L ILGCQTLT F+YSQ DGTY  NIE  V KVC +ARE GDEH K  L
Sbjct: 165 VSELLDKPKQDALLILGCQTLTRFIYSQTDGTYTHNIEKFVQKVCKLAREHGDEHHKSRL 224

Query: 252 RASSLQCISSMVWFMTEFSHFFAGFDDIVHVTLDNYEPDVCHVDNDESGETHHNWVADVI 73
           RASSLQC+S+MVWFM EF + F  FD+IV VTLDNYEPD     +DE GE  HNWV +V+
Sbjct: 225 RASSLQCLSAMVWFMAEFLYIFGAFDEIVQVTLDNYEPD---KHDDERGEPQHNWVDEVV 281

Query: 72  RSEARGAV--SDVSQSYMIIWPHSEK 1
           RSE RGA    D S +   I P  EK
Sbjct: 282 RSEGRGAAVSYDTSSNCTTIRPRPEK 307


>ref|XP_002872241.1| hypothetical protein ARALYDRAFT_489516 [Arabidopsis lyrata subsp.
           lyrata] gi|297318078|gb|EFH48500.1| hypothetical protein
           ARALYDRAFT_489516 [Arabidopsis lyrata subsp. lyrata]
          Length = 983

 Score =  318 bits (815), Expect = 1e-84
 Identities = 160/264 (60%), Positives = 184/264 (69%)
 Frame = -1

Query: 792 MGFMSRRVVPVCGQMCVCCPALRSRSRQPVKRYKKLLADIFPKSPDAPPNERKIVKLCEY 613
           MGF+SR V P C  MCVCCPALRSRSRQPVKRYKKLL +IFPKSPD  PNERKIVKLCEY
Sbjct: 1   MGFISRNVFPACESMCVCCPALRSRSRQPVKRYKKLLGEIFPKSPDGAPNERKIVKLCEY 60

Query: 612 AAKNPFRIPKIAQHLERRIYKELVRNHHFNFITVAMEAYNKFLFICKHHMPYFAAXXXXX 433
           AAKNP RIPKIA+ LE R YK+L R+    FI +  EAYNK L  CK  M YFA      
Sbjct: 61  AAKNPIRIPKIAKFLEERCYKDL-RSEQMKFINIVTEAYNKMLCHCKDQMAYFATSLLNV 119

Query: 432 XXXXLDNTNQHHLSILGCQTLTSFVYSQEDGTYARNIEILVPKVCMMAREVGDEHSKCCL 253
               LDN+ Q   +ILGCQTLT F+YSQ DGTY  +IE    KVC +ARE G+EH K CL
Sbjct: 120 VTELLDNSKQDTPTILGCQTLTRFIYSQVDGTYTHSIEKFALKVCSLAREEGEEHQKQCL 179

Query: 252 RASSLQCISSMVWFMTEFSHFFAGFDDIVHVTLDNYEPDVCHVDNDESGETHHNWVADVI 73
           RAS LQC+S+MVW+M EFSH FA  D+IVH  LDNYE D+    N++  E + NWV +VI
Sbjct: 180 RASGLQCLSAMVWYMGEFSHIFATVDEIVHAILDNYEADMIVQTNEDREEQNCNWVNEVI 239

Query: 72  RSEARGAVSDVSQSYMIIWPHSEK 1
           R E RG     S SYMI+ P + +
Sbjct: 240 RCEGRGTTVCNSPSYMIVRPRTAR 263


>ref|XP_002318950.1| predicted protein [Populus trichocarpa] gi|222857326|gb|EEE94873.1|
           predicted protein [Populus trichocarpa]
          Length = 1012

 Score =  318 bits (815), Expect = 1e-84
 Identities = 167/274 (60%), Positives = 194/274 (70%), Gaps = 10/274 (3%)
 Frame = -1

Query: 792 MGFMSRRVVPVCGQMCVCCPALRSRSRQPVKRYKKLLADIFPKSPDAPPNERKIVKLCEY 613
           MG +SR + P C  MCVCCPALRSRSRQPVKRYKKLLA+IFPKS D  PNERKIVKLCEY
Sbjct: 1   MGLISRNIFPACESMCVCCPALRSRSRQPVKRYKKLLAEIFPKSLDGHPNERKIVKLCEY 60

Query: 612 AAKNPFRIPKIAQHLERRIYKELVRNHHFNFITVAMEAYNKFLFICKHHMPYFAAXXXXX 433
           AAKNPFRIPKIA++LE R YKEL R+ H  FI +  EAYNK L +CK  M YFA      
Sbjct: 61  AAKNPFRIPKIAKYLEERCYKEL-RSGHVKFINIVTEAYNKLLCMCKDQMAYFAISLLNV 119

Query: 432 XXXXLDNTNQHHLSILGCQTLTSFVYSQEDGTYARNIEILVPKVCMMAREVGDEHSKCCL 253
               L+ + Q  L ILGCQTLT F+YSQ DGTY+ NIE  V KVC +ARE G+E++K CL
Sbjct: 120 VNELLEKSKQDPLMILGCQTLTRFIYSQADGTYSHNIEKFVHKVCNLARENGNENNKSCL 179

Query: 252 RASSLQCISSM----------VWFMTEFSHFFAGFDDIVHVTLDNYEPDVCHVDNDESGE 103
           RASSLQC+S+M          VWFM EFS+ FA FD+IVHVTLDNYEPD    ++D   +
Sbjct: 180 RASSLQCLSAMVHQFGLTFRAVWFMAEFSYIFAAFDEIVHVTLDNYEPD---EEDDGRED 236

Query: 102 THHNWVADVIRSEARGAVSDVSQSYMIIWPHSEK 1
            HHNW+ DV+R E  G V+D+  S M I P  EK
Sbjct: 237 AHHNWL-DVVRCE--GRVADMGSSCMAIRPRPEK 267


>ref|NP_198037.3| uncharacterized protein [Arabidopsis thaliana]
           gi|186525992|ref|NP_001031947.2| uncharacterized protein
           [Arabidopsis thaliana] gi|186525996|ref|NP_001031948.2|
           uncharacterized protein [Arabidopsis thaliana]
           gi|334187962|ref|NP_001190405.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332006230|gb|AED93613.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332006231|gb|AED93614.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332006232|gb|AED93615.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332006233|gb|AED93616.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 983

 Score =  317 bits (813), Expect = 2e-84
 Identities = 159/264 (60%), Positives = 184/264 (69%)
 Frame = -1

Query: 792 MGFMSRRVVPVCGQMCVCCPALRSRSRQPVKRYKKLLADIFPKSPDAPPNERKIVKLCEY 613
           MGF+SR V P C  MC+CCPALRSRSRQPVKRYKKLL +IFPKSPD  PNERKIVKLCEY
Sbjct: 1   MGFISRNVFPACESMCICCPALRSRSRQPVKRYKKLLGEIFPKSPDGGPNERKIVKLCEY 60

Query: 612 AAKNPFRIPKIAQHLERRIYKELVRNHHFNFITVAMEAYNKFLFICKHHMPYFAAXXXXX 433
           AAKNP RIPKIA+ LE R YK+L R+    FI +  EAYNK L  CK  M YFA      
Sbjct: 61  AAKNPIRIPKIAKFLEERCYKDL-RSEQMKFINIVTEAYNKMLCHCKDQMAYFATSLLNV 119

Query: 432 XXXXLDNTNQHHLSILGCQTLTSFVYSQEDGTYARNIEILVPKVCMMAREVGDEHSKCCL 253
               LDN+ Q   +ILGCQTLT F+YSQ DGTY  +IE    KVC +ARE G+EH K CL
Sbjct: 120 VTELLDNSKQDTPTILGCQTLTRFIYSQVDGTYTHSIEKFALKVCSLAREEGEEHQKQCL 179

Query: 252 RASSLQCISSMVWFMTEFSHFFAGFDDIVHVTLDNYEPDVCHVDNDESGETHHNWVADVI 73
           RAS LQC+S+MVW+M EFSH FA  D+IVH  LDNYE D+    N++  E + NWV +VI
Sbjct: 180 RASGLQCLSAMVWYMGEFSHIFATVDEIVHAILDNYEADMIVQTNEDREEQNCNWVNEVI 239

Query: 72  RSEARGAVSDVSQSYMIIWPHSEK 1
           R E RG     S SYMI+ P + +
Sbjct: 240 RCEGRGTTICNSPSYMIVRPRTAR 263


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