BLASTX nr result

ID: Cimicifuga21_contig00022821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022821
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog ...   349   4e-94
emb|CBI16239.3| unnamed protein product [Vitis vinifera]              339   3e-91
ref|XP_004149537.1| PREDICTED: DNA repair protein RAD51 homolog ...   335   8e-90
ref|XP_003597136.1| DNA repair protein RAD51-like protein [Medic...   330   1e-88
ref|XP_003547508.1| PREDICTED: DNA repair protein RAD51 homolog ...   327   2e-87

>ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Vitis vinifera]
          Length = 439

 Score =  349 bits (895), Expect = 4e-94
 Identities = 177/223 (79%), Positives = 204/223 (91%)
 Frame = -3

Query: 677 MANKLIADMGLPKSMANLFAARNIHTAKDALSLTEFELMELLDVGIADVASAVAHISEIT 498
           MANKLI++MGLP S+AN+FAARNI TAK+ALSLTEFELMELLDVG+A V SAVAHISEI 
Sbjct: 1   MANKLISEMGLPTSIANIFAARNITTAKEALSLTEFELMELLDVGMARVTSAVAHISEIV 60

Query: 497 CPPYQTAHSLMEERVQNEYLRGHLPTRLKGLDEALCGGIPFGVLTELVGPPGIGKTQFCM 318
            PP QTA SLME+RVQNEY+ GHLPTRLKGLDEAL GGIPFGVLTELVGPPGIGKTQFC+
Sbjct: 61  SPPTQTALSLMEQRVQNEYMAGHLPTRLKGLDEALGGGIPFGVLTELVGPPGIGKTQFCL 120

Query: 317 KLSLLAALPSNRGGLNGRVIYIDIESKFSSKRMIEIGAKSFPEIFHLEGMAQEMAGRILV 138
           KLSLLA+LP++ GGL+GRVIYID ESKFSS+RMIEIG+KSFPEIFH+EGMA+EMAGRILV
Sbjct: 121 KLSLLASLPASYGGLDGRVIYIDAESKFSSRRMIEIGSKSFPEIFHVEGMAKEMAGRILV 180

Query: 137 LRPASLSEFTESLLQIQLSVLQHQVKLLIVDSVAGLASGEQER 9
           LRP SLSEFTESL  I++S+LQ+ VKLL++DS+A L +GE ++
Sbjct: 181 LRPTSLSEFTESLQHIKISLLQNHVKLLVIDSMAALVTGEYDQ 223


>emb|CBI16239.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  339 bits (870), Expect = 3e-91
 Identities = 173/223 (77%), Positives = 200/223 (89%)
 Frame = -3

Query: 677 MANKLIADMGLPKSMANLFAARNIHTAKDALSLTEFELMELLDVGIADVASAVAHISEIT 498
           MANKLI++MGLP S+AN+FAARNI TAK+ALSLTEFELMELLDVG+A V SAVAHISEI 
Sbjct: 1   MANKLISEMGLPTSIANIFAARNITTAKEALSLTEFELMELLDVGMARVTSAVAHISEIV 60

Query: 497 CPPYQTAHSLMEERVQNEYLRGHLPTRLKGLDEALCGGIPFGVLTELVGPPGIGKTQFCM 318
            PP QTA SLME+RVQNEY+ GHLPTRLKGLDEAL GGIPFGVLTELVGPPGIGKTQFC+
Sbjct: 61  SPPTQTALSLMEQRVQNEYMAGHLPTRLKGLDEALGGGIPFGVLTELVGPPGIGKTQFCL 120

Query: 317 KLSLLAALPSNRGGLNGRVIYIDIESKFSSKRMIEIGAKSFPEIFHLEGMAQEMAGRILV 138
           KLSLLA+LP++ GGL+GRVIYID ESKFSS+RMIEIG+KSFPEIFH+EGMA+E    ILV
Sbjct: 121 KLSLLASLPASYGGLDGRVIYIDAESKFSSRRMIEIGSKSFPEIFHVEGMAKEACPLILV 180

Query: 137 LRPASLSEFTESLLQIQLSVLQHQVKLLIVDSVAGLASGEQER 9
           LRP SLSEFTESL  I++S+LQ+ VKLL++DS+A L +GE ++
Sbjct: 181 LRPTSLSEFTESLQHIKISLLQNHVKLLVIDSMAALVTGEYDQ 223


>ref|XP_004149537.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cucumis
           sativus]
          Length = 371

 Score =  335 bits (858), Expect = 8e-90
 Identities = 171/225 (76%), Positives = 202/225 (89%)
 Frame = -3

Query: 677 MANKLIADMGLPKSMANLFAARNIHTAKDALSLTEFELMELLDVGIADVASAVAHISEIT 498
           MAN+LI  MGLP+S+AN+FAARNI+TAK+ALSLTEFELMELLDVG+++VASAVAHISEI 
Sbjct: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 497 CPPYQTAHSLMEERVQNEYLRGHLPTRLKGLDEALCGGIPFGVLTELVGPPGIGKTQFCM 318
            PPYQTA SLME+R+QNE+L GHL T LKGLDEAL GGIPFGVLTELVGP GIGKTQFC+
Sbjct: 61  SPPYQTALSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 317 KLSLLAALPSNRGGLNGRVIYIDIESKFSSKRMIEIGAKSFPEIFHLEGMAQEMAGRILV 138
           KLS LAALP + GGL+GRVIYID+ESKFSSKRMIEIG +SFP++F+ + MAQEMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLDGRVIYIDVESKFSSKRMIEIGMRSFPDVFNKKDMAQEMAGRILV 180

Query: 137 LRPASLSEFTESLLQIQLSVLQHQVKLLIVDSVAGLASGEQERDA 3
           LRPASLSEFTESL +I++S+L+ +VKL+I+DS+A L +GE E  A
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYELGA 225


>ref|XP_003597136.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|355486184|gb|AES67387.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 484

 Score =  330 bits (847), Expect = 1e-88
 Identities = 168/219 (76%), Positives = 193/219 (88%)
 Frame = -3

Query: 677 MANKLIADMGLPKSMANLFAARNIHTAKDALSLTEFELMELLDVGIADVASAVAHISEIT 498
           MANKLI  +GLPKS+AN+F ARNI TAKDALSLTEFELMELLDVG+++V SA+AHISE+ 
Sbjct: 1   MANKLINQLGLPKSIANIFTARNIITAKDALSLTEFELMELLDVGMSEVTSAMAHISELV 60

Query: 497 CPPYQTAHSLMEERVQNEYLRGHLPTRLKGLDEALCGGIPFGVLTELVGPPGIGKTQFCM 318
           CPP QT      +RV+NE L GHLPT+LKGLDEALCGGIPFGV+TELVGPPGIGKTQFC+
Sbjct: 61  CPPCQT------QRVRNESLAGHLPTQLKGLDEALCGGIPFGVVTELVGPPGIGKTQFCL 114

Query: 317 KLSLLAALPSNRGGLNGRVIYIDIESKFSSKRMIEIGAKSFPEIFHLEGMAQEMAGRILV 138
           KLSLLA+LP N GGL+GRVIYID+ESKFSSKR+IEIG KSFPEIFH +GMAQEMAGRIL+
Sbjct: 115 KLSLLASLPVNYGGLDGRVIYIDVESKFSSKRLIEIGTKSFPEIFHKKGMAQEMAGRILI 174

Query: 137 LRPASLSEFTESLLQIQLSVLQHQVKLLIVDSVAGLASG 21
           LRP SLSEF ESL +I++S+LQ QVKLLI+DS+A L  G
Sbjct: 175 LRPTSLSEFAESLQRIKVSLLQQQVKLLIIDSMAALVLG 213


>ref|XP_003547508.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Glycine max]
          Length = 378

 Score =  327 bits (838), Expect = 2e-87
 Identities = 168/225 (74%), Positives = 191/225 (84%)
 Frame = -3

Query: 677 MANKLIADMGLPKSMANLFAARNIHTAKDALSLTEFELMELLDVGIADVASAVAHISEIT 498
           MANKLI  MGLPKS+ N+F ARNI TAKDALS TEFELMELLDVG  +V SA+AH+SE+ 
Sbjct: 1   MANKLINQMGLPKSIVNIFTARNIITAKDALSHTEFELMELLDVGKEEVTSAMAHVSEVV 60

Query: 497 CPPYQTAHSLMEERVQNEYLRGHLPTRLKGLDEALCGGIPFGVLTELVGPPGIGKTQFCM 318
           CPP QTA  L+E+RV NE L GHL TRLKGLDEALCGGIPFGVLTELVGP GIGKTQFC+
Sbjct: 61  CPPCQTALLLLEQRVLNESLAGHLSTRLKGLDEALCGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 317 KLSLLAALPSNRGGLNGRVIYIDIESKFSSKRMIEIGAKSFPEIFHLEGMAQEMAGRILV 138
           KLSLLA+LP+N GGL+GRVIYID+ESKF SKR+IEIG  SFPEIF  +GMAQEMAGRIL+
Sbjct: 121 KLSLLASLPTNCGGLDGRVIYIDVESKFRSKRLIEIGINSFPEIFLKKGMAQEMAGRILI 180

Query: 137 LRPASLSEFTESLLQIQLSVLQHQVKLLIVDSVAGLASGEQERDA 3
           L P SLSEF ESL QI++S+LQ QVKLLI+DS+A L  GE + +A
Sbjct: 181 LHPTSLSEFAESLHQIRVSLLQQQVKLLIIDSMAALVLGEHDSEA 225


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