BLASTX nr result

ID: Cimicifuga21_contig00022774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022774
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   159   2e-37
emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]   159   2e-37
emb|CBI22982.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_002516947.1| conserved hypothetical protein [Ricinus comm...   127   1e-27

>ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group I protein-like
            [Vitis vinifera]
          Length = 1427

 Score =  159 bits (403), Expect = 2e-37
 Identities = 91/145 (62%), Positives = 106/145 (73%), Gaps = 5/145 (3%)
 Frame = -1

Query: 434  QENAQSKGIINKIKRENRCIPDLIFQIEDYEKYLIQLSKLTKINLLRHAKRSTARDFKIV 255
            QENA+S+G+++KIKRENRCIPDLIFQIEDYEKYLIQLSK TK+NLLRHAKRST+RDFKI+
Sbjct: 1285 QENAKSRGLLSKIKRENRCIPDLIFQIEDYEKYLIQLSKATKVNLLRHAKRSTSRDFKIL 1344

Query: 254  EVKDVNGXXXXXXXESNPVGSTASQNES---CD--EEDGSEKVVSPESSIAGAAADSESD 90
            +    N          N   STA QNE+   C+  E +GSE+  SPE     AA DSESD
Sbjct: 1345 DHPRTN---TGEEEPPNHNHSTAVQNETGQECEDNEGNGSERAPSPEPHSPLAAEDSESD 1401

Query: 89   GEDTNMNMKSKRAKMSKVVQDSDDE 15
            GED +     KR+KMSKVVQDSDDE
Sbjct: 1402 GEDRDALPNPKRSKMSKVVQDSDDE 1426


>emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]
          Length = 1413

 Score =  159 bits (403), Expect = 2e-37
 Identities = 91/145 (62%), Positives = 106/145 (73%), Gaps = 5/145 (3%)
 Frame = -1

Query: 434  QENAQSKGIINKIKRENRCIPDLIFQIEDYEKYLIQLSKLTKINLLRHAKRSTARDFKIV 255
            QENA+S+G+++KIKRENRCIPDLIFQIEDYEKYLIQLSK TK+NLLRHAKRST+RDFKI+
Sbjct: 1271 QENAKSRGLLSKIKRENRCIPDLIFQIEDYEKYLIQLSKATKVNLLRHAKRSTSRDFKIL 1330

Query: 254  EVKDVNGXXXXXXXESNPVGSTASQNES---CD--EEDGSEKVVSPESSIAGAAADSESD 90
            +    N          N   STA QNE+   C+  E +GSE+  SPE     AA DSESD
Sbjct: 1331 DHPRTN---TGEEEPPNHNHSTAVQNETGQECEDNEGNGSERAPSPEPHSPLAAEDSESD 1387

Query: 89   GEDTNMNMKSKRAKMSKVVQDSDDE 15
            GED +     KR+KMSKVVQDSDDE
Sbjct: 1388 GEDRDALPNPKRSKMSKVVQDSDDE 1412


>emb|CBI22982.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  145 bits (367), Expect = 3e-33
 Identities = 84/138 (60%), Positives = 99/138 (71%), Gaps = 5/138 (3%)
 Frame = -1

Query: 434  QENAQSKGIINKIKRENRCIPDLIFQIEDYEKYLIQLSKLTKINLLRHAKRSTARDFKIV 255
            QENA+S+G+++KIKRENRCIPDLIFQIEDYEKYLIQLSK TK+NLLRHAKRST+RDFKI+
Sbjct: 1218 QENAKSRGLLSKIKRENRCIPDLIFQIEDYEKYLIQLSKATKVNLLRHAKRSTSRDFKIL 1277

Query: 254  EVKDVNGXXXXXXXESNPVGSTASQNES---CD--EEDGSEKVVSPESSIAGAAADSESD 90
            +    N          N   STA QNE+   C+  E +GSE+  SPE     AA DSESD
Sbjct: 1278 DHPRTN---TGEEEPPNHNHSTAVQNETGQECEDNEGNGSERAPSPEPHSPLAAEDSESD 1334

Query: 89   GEDTNMNMKSKRAKMSKV 36
            GED +     KR+KMSKV
Sbjct: 1335 GEDRDALPNPKRSKMSKV 1352


>ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|222864551|gb|EEF01682.1|
            predicted protein [Populus trichocarpa]
          Length = 1406

 Score =  127 bits (319), Expect = 9e-28
 Identities = 74/146 (50%), Positives = 93/146 (63%), Gaps = 6/146 (4%)
 Frame = -1

Query: 434  QENAQSKGIINKIKRENRCIPDLIFQIEDYEKYLIQLSKLTKINLLRHAKRSTARDFKIV 255
            QENA SK   NKIKREN+CIPDLI+QIED EKYLIQLSK++KINLLRHAKRST+RDFKI+
Sbjct: 1262 QENANSKCTANKIKRENKCIPDLIYQIEDCEKYLIQLSKVSKINLLRHAKRSTSRDFKII 1321

Query: 254  EVKDVNGXXXXXXXESNPVGSTASQNESCDEEDG------SEKVVSPESSIAGAAADSES 93
            + + +            P    A+  E+   E G      S+KV+S +S    +  +S S
Sbjct: 1322 DSRKI--ITEEDEPNHEPACHAAATAENGSPESGDNEGNESDKVLSSQSGSPLSEEESAS 1379

Query: 92   DGEDTNMNMKSKRAKMSKVVQDSDDE 15
            DGE+      +KR K  +VV DSDDE
Sbjct: 1380 DGENGGALPHAKRVKRDRVVLDSDDE 1405


>ref|XP_002516947.1| conserved hypothetical protein [Ricinus communis]
            gi|223544035|gb|EEF45561.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1357

 Score =  127 bits (318), Expect = 1e-27
 Identities = 68/142 (47%), Positives = 93/142 (65%), Gaps = 2/142 (1%)
 Frame = -1

Query: 434  QENAQSKGIINKIKRENRCIPDLIFQIEDYEKYLIQLSKLTKINLLRHAKRSTARDFKIV 255
            QE   +KGIINKIKREN+CIP+LIFQIEDYEKYLI+LSK +K+NLL+HAKRST+RDF+I+
Sbjct: 1214 QEKPNTKGIINKIKRENKCIPELIFQIEDYEKYLIRLSKASKVNLLKHAKRSTSRDFRIL 1273

Query: 254  EVKDVNGXXXXXXXESN--PVGSTASQNESCDEEDGSEKVVSPESSIAGAAADSESDGED 81
            +  +           +N   VG+   ++    E++ S+K  S        A +SES+GED
Sbjct: 1274 DPPNDKEEADLNHEHNNDDAVGANVDRSHEDSEDNVSDKFSSRRKDSPEIAEESESEGED 1333

Query: 80   TNMNMKSKRAKMSKVVQDSDDE 15
                   KR +  +VVQD+DD+
Sbjct: 1334 GCGLPNGKRMRRDRVVQDTDDD 1355


Top