BLASTX nr result
ID: Cimicifuga21_contig00022755
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00022755
(1398 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534048.1| pentatricopeptide repeat-containing protein,... 507 e-141
ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi... 497 e-138
emb|CBI37948.3| unnamed protein product [Vitis vinifera] 497 e-138
ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containi... 454 e-125
ref|NP_195209.2| pentatricopeptide repeat-containing protein [Ar... 434 e-119
>ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525928|gb|EEF28334.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1129
Score = 507 bits (1306), Expect = e-141
Identities = 263/434 (60%), Positives = 313/434 (72%), Gaps = 6/434 (1%)
Frame = +2
Query: 113 DHKPNHAVSETINHKI------SGYSGVFKESPREELYTFYEENQGRTRCVSNSRDLKSI 274
+ K N S T+N +I S Y + K+S RE+LY FYEE+Q + SN L ++
Sbjct: 282 EEKSNDTASSTMNDEIGKKDGISSYYDITKKSAREDLYKFYEESQSTEKSPSNLNGLDTV 341
Query: 275 STHCVPQSKILSSLLRTNTLHRSEIXXXXXXXXXXXXXLEGQLPLAHYKDGSSSKRKEYR 454
S+H P S L+ N + + E +E ++ LA Y+ G+S K +
Sbjct: 342 SSHAAPLIGNNISSLKVNGVGK-EAELLSPQSPQFAETVERKVHLARYERGASRKNEHIG 400
Query: 455 RSGELPREMGKGFSHRSSQRGWPEAPQPNGRHPNSEDDAATYLSTYNRLLRDRRLADCIE 634
PRE KG + PE P PNG H ++D A + YNRLLRD RLA+C++
Sbjct: 401 GRRGFPREKEKGHVIQDEHTNLPEFPYPNGVHSTNKDHKAEQVHGYNRLLRDGRLAECVD 460
Query: 635 LLKSMEQKGLLDMDKIYHVKFFNICKSQKAVKEAFHFAKMIGNPTLSTFNMLLSVCASSQ 814
LL+ ME++GLLDM KIYH KFF ICK QKAVKEAF F K++ NP+LSTFNML+SVC+SSQ
Sbjct: 461 LLEDMERRGLLDMSKIYHAKFFKICKIQKAVKEAFRFCKLVPNPSLSTFNMLMSVCSSSQ 520
Query: 815 DSKGAFQVLRLVKEAGLRADCKLYTTLISTCAKSGKVDTMFKVFHEMVNAGVEPNLHTYG 994
DS GAF+VLRL + AGL+ADCKLYTTLISTCAKSGKVD MF+VFHEMVNAGVEPN+HTYG
Sbjct: 521 DSDGAFEVLRLAQGAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYG 580
Query: 995 ALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAE 1174
+LIDGCA+AGQ+AKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM AE
Sbjct: 581 SLIDGCAKAGQMAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAE 640
Query: 1175 PTPVDPDHVTVGALIKTCTQAGQFDRAREVYKMIHQYKIIGTPEVYTIAVGCSSQMGDLE 1354
P+DPDH+TVGAL+K C +AGQ DRA+EVY M+H+Y I GTPEVYTIAV SQ GD E
Sbjct: 641 THPIDPDHITVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPEVYTIAVNFCSQTGDWE 700
Query: 1355 FALSVYRDMTRNGV 1396
FA SVY DMTR GV
Sbjct: 701 FARSVYDDMTRKGV 714
Score = 77.4 bits (189), Expect = 8e-12
Identities = 72/316 (22%), Positives = 124/316 (39%), Gaps = 44/316 (13%)
Frame = +2
Query: 581 LSTYNRLLR----DRRLADCIELLKSMEQKGLLDMDKIYHVKFFNICKSQK--AVKEAFH 742
LST+N L+ + E+L+ + GL K+Y KS K A+ E FH
Sbjct: 506 LSTFNMLMSVCSSSQDSDGAFEVLRLAQGAGLKADCKLYTTLISTCAKSGKVDAMFEVFH 565
Query: 743 FAKMIG-NPTLSTFNMLLSVCASSQDSKGAFQVLRLVKEAGLRADCKLYTTLISTC---- 907
G P + T+ L+ CA + AF +++ ++ D ++ LI+ C
Sbjct: 566 EMVNAGVEPNVHTYGSLIDGCAKAGQMAKAFGAYGILRSKNVKPDRVVFNALITACGQSG 625
Query: 908 ---------------------------------AKSGKVDTMFKVFHEMVNAGVEPNLHT 988
AK+G+VD +V++ + ++
Sbjct: 626 AVDRAFDVLAEMGAETHPIDPDHITVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPEV 685
Query: 989 YGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMR 1168
Y ++ C++ G A Y + K V PD + +AL+ G +G VD AF+ L E R
Sbjct: 686 YTIAVNFCSQTGDWEFARSVYDDMTRKGVAPDEMFLSALVDVAGHAGLVDIAFETLQEAR 745
Query: 1169 AEPTPVDPDHVTVGALIKTCTQAGQFDRAREVYKMIHQYKIIGTPEVYTIAVGCSSQMGD 1348
+ T + V +L+ C+ A + +A E+Y+ I K+ T +
Sbjct: 746 TQGTQL--GIVPYSSLMGACSNAKNWQKALELYEDIKAIKLKPTVSTMNALMTALCDGDQ 803
Query: 1349 LEFALSVYRDMTRNGV 1396
L+ AL +M G+
Sbjct: 804 LQKALETLSEMKSFGL 819
Score = 67.4 bits (163), Expect = 9e-09
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 6/233 (2%)
Frame = +2
Query: 674 DKIYHVKFFNICKSQKAVKEAFHFAKMIG------NPTLSTFNMLLSVCASSQDSKGAFQ 835
D++ C AV AF +G +P T L+ CA + A +
Sbjct: 610 DRVVFNALITACGQSGAVDRAFDVLAEMGAETHPIDPDHITVGALMKACAKAGQVDRAKE 669
Query: 836 VLRLVKEAGLRADCKLYTTLISTCAKSGKVDTMFKVFHEMVNAGVEPNLHTYGALIDGCA 1015
V ++ + ++ ++YT ++ C+++G + V+ +M GV P+ AL+D
Sbjct: 670 VYNMLHKYNIKGTPEVYTIAVNFCSQTGDWEFARSVYDDMTRKGVAPDEMFLSALVDVAG 729
Query: 1016 RAGQVAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEPTPVDPD 1195
AG V AF R++ + V +++L+ AC + +A ++ +++A + P
Sbjct: 730 HAGLVDIAFETLQEARTQGTQLGIVPYSSLMGACSNAKNWQKALELYEDIKA--IKLKPT 787
Query: 1196 HVTVGALIKTCTQAGQFDRAREVYKMIHQYKIIGTPEVYTIAVGCSSQMGDLE 1354
T+ AL+ Q +A E + + + Y+I + S + DL+
Sbjct: 788 VSTMNALMTALCDGDQLQKALETLSEMKSFGLCPNIVTYSILLVASERKDDLD 840
>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Vitis vinifera]
Length = 1115
Score = 497 bits (1280), Expect = e-138
Identities = 267/461 (57%), Positives = 325/461 (70%), Gaps = 2/461 (0%)
Frame = +2
Query: 20 EFGSESHGLVVQPVSNGYVIP-VNFENGETEQDHKPNHAVSETINHKISGYSGVFKESPR 196
EFG + VVQ S +P + G E+ ++ E+ +I ++G+F+++ R
Sbjct: 245 EFGYDLSTPVVQTKSIAASVPDIIALEGVNERKNRGGRPGEES---EIISFTGIFRDTIR 301
Query: 197 EELYTFYEENQGRTRCVSNSRDLKSISTHC-VPQSKILSSLLRTNTLHRSEIXXXXXXXX 373
EELYTFYE Q + + N +K+++++ + +S +R T +E+
Sbjct: 302 EELYTFYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATSKEAELSAQNSHSS 361
Query: 374 XXXXXLEGQLPLAHYKDGSSSKRKEYRRSGELPREMGKGFSHRSSQRGWPEAPQPNGRHP 553
+EG++ L+ YK+GSS KR + + PR+ S R + P NG
Sbjct: 362 ADY--VEGKMSLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFPLSNGMTV 419
Query: 554 NSEDDAATYLSTYNRLLRDRRLADCIELLKSMEQKGLLDMDKIYHVKFFNICKSQKAVKE 733
+ + S YNRLL + RL+DCI+LL+ ME+ GLLDMDK+YH KFF IC+SQKAV E
Sbjct: 420 KEKYHDSEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRSQKAVTE 479
Query: 734 AFHFAKMIGNPTLSTFNMLLSVCASSQDSKGAFQVLRLVKEAGLRADCKLYTTLISTCAK 913
AF FAK+I PTLSTFNML+SVCA+SQDS GAFQVL+LV+EAGL+ADCKLYTTLISTCAK
Sbjct: 480 AFRFAKLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAK 539
Query: 914 SGKVDTMFKVFHEMVNAGVEPNLHTYGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVV 1093
SGKVD MF+VFHEMVNA VEPN+HTYGALIDGC RAGQVAKAFGAYGI+RSK V+PDRVV
Sbjct: 540 SGKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVV 599
Query: 1094 FNALITACGQSGAVDRAFDVLAEMRAEPTPVDPDHVTVGALIKTCTQAGQFDRAREVYKM 1273
FNALITACGQSGAVDRAFDVLAEMRAE P+DPDH+TVGALIK CT AGQ DRAREVYKM
Sbjct: 600 FNALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKM 659
Query: 1274 IHQYKIIGTPEVYTIAVGCSSQMGDLEFALSVYRDMTRNGV 1396
I QY I GTPEVYTIAV SQ+GD EFA SVY DMTR GV
Sbjct: 660 IDQYNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGV 700
Score = 84.7 bits (208), Expect = 5e-14
Identities = 81/351 (23%), Positives = 136/351 (38%), Gaps = 79/351 (22%)
Frame = +2
Query: 581 LSTYNRLLR----DRRLADCIELLKSMEQKGLLDMDKIYHVKFFNICKSQK--AVKEAFH 742
LST+N L+ + A ++L+ + + GL K+Y KS K A+ E FH
Sbjct: 492 LSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEVFH 551
Query: 743 FAKMIG---NPTLSTFNMLLSVCASSQDSKGAFQVLRLVKEAGLRADCKLYTTLISTCAK 913
+M+ P + T+ L+ C + AF +++ + D ++ LI+ C +
Sbjct: 552 --EMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQ 609
Query: 914 SGKVDTMFKVFHEM--VNAGVEPNLHTYGALIDGCARAGQVAKAFGAYGILRSKNVK--- 1078
SG VD F V EM ++P+ T GALI C AGQV +A Y ++ N+K
Sbjct: 610 SGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTP 669
Query: 1079 --------------------------------PDRVVFNALITACGQSGAVDRAFDVLAE 1162
PD + +ALI G +G +D AF+V+ E
Sbjct: 670 EVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQE 729
Query: 1163 MRAEPTPV---------------------------------DPDHVTVGALIKTCTQAGQ 1243
R + P+ +P T+ ALI + Q
Sbjct: 730 ARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQ 789
Query: 1244 FDRAREVYKMIHQYKIIGTPEVYTIAVGCSSQMGDLEFALSVYRDMTRNGV 1396
++A EV + + + Y+I + S + D++ L + ++ V
Sbjct: 790 LEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSV 840
>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
Length = 1550
Score = 497 bits (1280), Expect = e-138
Identities = 267/461 (57%), Positives = 325/461 (70%), Gaps = 2/461 (0%)
Frame = +2
Query: 20 EFGSESHGLVVQPVSNGYVIP-VNFENGETEQDHKPNHAVSETINHKISGYSGVFKESPR 196
EFG + VVQ S +P + G E+ ++ E+ +I ++G+F+++ R
Sbjct: 680 EFGYDLSTPVVQTKSIAASVPDIIALEGVNERKNRGGRPGEES---EIISFTGIFRDTIR 736
Query: 197 EELYTFYEENQGRTRCVSNSRDLKSISTHC-VPQSKILSSLLRTNTLHRSEIXXXXXXXX 373
EELYTFYE Q + + N +K+++++ + +S +R T +E+
Sbjct: 737 EELYTFYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATSKEAELSAQNSHSS 796
Query: 374 XXXXXLEGQLPLAHYKDGSSSKRKEYRRSGELPREMGKGFSHRSSQRGWPEAPQPNGRHP 553
+EG++ L+ YK+GSS KR + + PR+ S R + P NG
Sbjct: 797 ADY--VEGKMSLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFPLSNGMTV 854
Query: 554 NSEDDAATYLSTYNRLLRDRRLADCIELLKSMEQKGLLDMDKIYHVKFFNICKSQKAVKE 733
+ + S YNRLL + RL+DCI+LL+ ME+ GLLDMDK+YH KFF IC+SQKAV E
Sbjct: 855 KEKYHDSEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRSQKAVTE 914
Query: 734 AFHFAKMIGNPTLSTFNMLLSVCASSQDSKGAFQVLRLVKEAGLRADCKLYTTLISTCAK 913
AF FAK+I PTLSTFNML+SVCA+SQDS GAFQVL+LV+EAGL+ADCKLYTTLISTCAK
Sbjct: 915 AFRFAKLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAK 974
Query: 914 SGKVDTMFKVFHEMVNAGVEPNLHTYGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVV 1093
SGKVD MF+VFHEMVNA VEPN+HTYGALIDGC RAGQVAKAFGAYGI+RSK V+PDRVV
Sbjct: 975 SGKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVV 1034
Query: 1094 FNALITACGQSGAVDRAFDVLAEMRAEPTPVDPDHVTVGALIKTCTQAGQFDRAREVYKM 1273
FNALITACGQSGAVDRAFDVLAEMRAE P+DPDH+TVGALIK CT AGQ DRAREVYKM
Sbjct: 1035 FNALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKM 1094
Query: 1274 IHQYKIIGTPEVYTIAVGCSSQMGDLEFALSVYRDMTRNGV 1396
I QY I GTPEVYTIAV SQ+GD EFA SVY DMTR GV
Sbjct: 1095 IDQYNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGV 1135
Score = 84.7 bits (208), Expect = 5e-14
Identities = 81/351 (23%), Positives = 136/351 (38%), Gaps = 79/351 (22%)
Frame = +2
Query: 581 LSTYNRLLR----DRRLADCIELLKSMEQKGLLDMDKIYHVKFFNICKSQK--AVKEAFH 742
LST+N L+ + A ++L+ + + GL K+Y KS K A+ E FH
Sbjct: 927 LSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEVFH 986
Query: 743 FAKMIG---NPTLSTFNMLLSVCASSQDSKGAFQVLRLVKEAGLRADCKLYTTLISTCAK 913
+M+ P + T+ L+ C + AF +++ + D ++ LI+ C +
Sbjct: 987 --EMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQ 1044
Query: 914 SGKVDTMFKVFHEM--VNAGVEPNLHTYGALIDGCARAGQVAKAFGAYGILRSKNVK--- 1078
SG VD F V EM ++P+ T GALI C AGQV +A Y ++ N+K
Sbjct: 1045 SGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTP 1104
Query: 1079 --------------------------------PDRVVFNALITACGQSGAVDRAFDVLAE 1162
PD + +ALI G +G +D AF+V+ E
Sbjct: 1105 EVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQE 1164
Query: 1163 MRAEPTPV---------------------------------DPDHVTVGALIKTCTQAGQ 1243
R + P+ +P T+ ALI + Q
Sbjct: 1165 ARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQ 1224
Query: 1244 FDRAREVYKMIHQYKIIGTPEVYTIAVGCSSQMGDLEFALSVYRDMTRNGV 1396
++A EV + + + Y+I + S + D++ L + ++ V
Sbjct: 1225 LEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSV 1275
>ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Cucumis sativus]
Length = 1108
Score = 454 bits (1168), Expect = e-125
Identities = 242/414 (58%), Positives = 295/414 (71%), Gaps = 9/414 (2%)
Frame = +2
Query: 182 KESPREELYTFYEENQGRTRCVSNSRDLKSISTHCVPQSKILSSLLRTNTLHRSEIXXXX 361
+E RE++Y FYE+ + SN + S ++H Q SSL+ +E+
Sbjct: 299 EEPAREDIYMFYEDTKS-----SNQTETSSRTSHLYNQK--FSSLMVNGVSRVAELVLED 351
Query: 362 XXXXXXXXXLEGQLPLAHYKDGSSSKRKEYRRSGELPREMGKGFSHRSSQRGWPEA---- 529
++ ++P YK+GSS RK +SG G S R +R P
Sbjct: 352 SLPVAGY--VQREVPDVRYKEGSSGNRK---KSG------GNNIS-RHGERKEPSLHKGK 399
Query: 530 -----PQPNGRHPNSEDDAATYLSTYNRLLRDRRLADCIELLKSMEQKGLLDMDKIYHVK 694
P PNG+H + ++ +YN+ L+ RL DCI +L+ ME++G+LDM+KIYH K
Sbjct: 400 VVNGLPHPNGKHVHYKNLDVDQYKSYNQCLKGGRLHDCIRILQDMEKEGILDMNKIYHGK 459
Query: 695 FFNICKSQKAVKEAFHFAKMIGNPTLSTFNMLLSVCASSQDSKGAFQVLRLVKEAGLRAD 874
FFNICKS+KAV+EAF + +I NPTLSTFNML+SVCASSQDS+ AFQV+RLV+EAG++AD
Sbjct: 460 FFNICKSKKAVQEAFQYTALIQNPTLSTFNMLMSVCASSQDSERAFQVVRLVQEAGMKAD 519
Query: 875 CKLYTTLISTCAKSGKVDTMFKVFHEMVNAGVEPNLHTYGALIDGCARAGQVAKAFGAYG 1054
CKLYTTLISTC KSGKVD MF+VFH MVNAGVEPN+HTYGALIDGCARA QVAKAFG YG
Sbjct: 520 CKLYTTLISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCARAAQVAKAFGVYG 579
Query: 1055 ILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEPTPVDPDHVTVGALIKTCTQ 1234
I+RSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM AE P++PDH+T+GAL+K C
Sbjct: 580 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDHITIGALMKACAN 639
Query: 1235 AGQFDRAREVYKMIHQYKIIGTPEVYTIAVGCSSQMGDLEFALSVYRDMTRNGV 1396
AGQ DRAREVYKMIH YKI GTPEVYTIAV C SQ D +FA ++Y+DMTR GV
Sbjct: 640 AGQVDRAREVYKMIHDYKIKGTPEVYTIAVNCCSQSCDWDFASNIYQDMTRKGV 693
Score = 77.8 bits (190), Expect = 6e-12
Identities = 60/285 (21%), Positives = 120/285 (42%), Gaps = 6/285 (2%)
Frame = +2
Query: 560 EDDAATYLSTYNRLLRDRRLADCIELLKSMEQKGLLDMDKIYHVKFFNICKSQKAVKEAF 739
E + TY + + R ++A + M K + D++ C AV AF
Sbjct: 552 EPNVHTYGALIDGCARAAQVAKAFGVYGIMRSKNVKP-DRVVFNALITACGQSGAVDRAF 610
Query: 740 HFAKMIG------NPTLSTFNMLLSVCASSQDSKGAFQVLRLVKEAGLRADCKLYTTLIS 901
+G P T L+ CA++ A +V +++ + ++ ++YT ++
Sbjct: 611 DVLAEMGAELHPIEPDHITIGALMKACANAGQVDRAREVYKMIHDYKIKGTPEVYTIAVN 670
Query: 902 TCAKSGKVDTMFKVFHEMVNAGVEPNLHTYGALIDGCARAGQVAKAFGAYGILRSKNVKP 1081
C++S D ++ +M GV+P+ ALID AG++ AF G ++ ++
Sbjct: 671 CCSQSCDWDFASNIYQDMTRKGVQPDEIFLSALIDVAGHAGKLDAAFEVLGEAKTLGIRV 730
Query: 1082 DRVVFNALITACGQSGAVDRAFDVLAEMRAEPTPVDPDHVTVGALIKTCTQAGQFDRARE 1261
V +++L+ AC + +A + ++++ + TV ALI + Q A +
Sbjct: 731 GIVSYSSLMGACSNAKNWQKALALYEDLKSMKLRLTVS--TVNALITALSDGEQLQMAMD 788
Query: 1262 VYKMIHQYKIIGTPEVYTIAVGCSSQMGDLEFALSVYRDMTRNGV 1396
+ + + + Y+I S + DLE AL + +G+
Sbjct: 789 ILTEMKELGLSPNNITYSILTAASDRNNDLEIALMLLSQAKEDGI 833
Score = 69.7 bits (169), Expect = 2e-09
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 1/211 (0%)
Frame = +2
Query: 719 KAVKEAFHFAKMIGNPTLSTFNMLLSVCASSQDSKGAFQVLRLVKEAGLRADCKLYTTLI 898
+ V + H K+ G P + T + ++ C+ S D A + + + G++ D + LI
Sbjct: 647 REVYKMIHDYKIKGTPEVYT--IAVNCCSQSCDWDFASNIYQDMTRKGVQPDEIFLSALI 704
Query: 899 STCAKSGKVDTMFKVFHEMVNAGVEPNLHTYGALIDGCARAGQVAKAFGAYGILRSKNVK 1078
+GK+D F+V E G+ + +Y +L+ C+ A KA Y L+S ++
Sbjct: 705 DVAGHAGKLDAAFEVLGEAKTLGIRVGIVSYSSLMGACSNAKNWQKALALYEDLKSMKLR 764
Query: 1079 PDRVVFNALITACGQSGAVDRAFDVLAEMRAEPTPVDPDHVTVGALIKTCTQAGQFDRAR 1258
NALITA + A D+L EM+ + P+++T L + + A
Sbjct: 765 LTVSTVNALITALSDGEQLQMAMDILTEMK--ELGLSPNNITYSILTAASDRNNDLEIAL 822
Query: 1259 EVYKMIHQYKIIGTPEVYTIAVG-CSSQMGD 1348
+ + I+ T +Y +G C ++ D
Sbjct: 823 MLLSQAKEDGIVPTLTMYRCIIGMCLRRIAD 853
>ref|NP_195209.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635623|sp|Q0WLC6.2|PP349_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g34830, chloroplastic; Flags: Precursor
gi|332661026|gb|AEE86426.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 1089
Score = 434 bits (1116), Expect = e-119
Identities = 230/407 (56%), Positives = 283/407 (69%)
Frame = +2
Query: 176 VFKESPREELYTFYEENQGRTRCVSNSRDLKSISTHCVPQSKILSSLLRTNTLHRSEIXX 355
+F ES REE++TFY N + S LK++S + L + N + ++
Sbjct: 274 IFAESKREEIHTFYGSNHSSAKS-SRLPSLKAVSPAVTSATNSLFLDHKNNGVIDTQFPG 332
Query: 356 XXXXXXXXXXXLEGQLPLAHYKDGSSSKRKEYRRSGELPREMGKGFSHRSSQRGWPEAPQ 535
E + AH G S RK+ + + P + GK H+ + P+ P
Sbjct: 333 QSSGQATGDVQEENLV--AHSNGGVSHIRKDVKGDWKFPSD-GKHVGHQIDE-SMPQFPA 388
Query: 536 PNGRHPNSEDDAATYLSTYNRLLRDRRLADCIELLKSMEQKGLLDMDKIYHVKFFNICKS 715
N NS + YNRLLRD R+ DCI LL+ ++Q+ LLDMDKIYH FF CK
Sbjct: 389 RNFELHNSNGRSPETSDAYNRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKK 448
Query: 716 QKAVKEAFHFAKMIGNPTLSTFNMLLSVCASSQDSKGAFQVLRLVKEAGLRADCKLYTTL 895
Q+AVKEAF F K+I NPT+STFNML+SVCASSQD +GA VLRLV+E+G+ ADCKLYTTL
Sbjct: 449 QRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTL 508
Query: 896 ISTCAKSGKVDTMFKVFHEMVNAGVEPNLHTYGALIDGCARAGQVAKAFGAYGILRSKNV 1075
IS+CAKSGKVD MF+VFH+M N+GVE NLHT+GALIDGCARAGQVAKAFGAYGILRSKNV
Sbjct: 509 ISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNV 568
Query: 1076 KPDRVVFNALITACGQSGAVDRAFDVLAEMRAEPTPVDPDHVTVGALIKTCTQAGQFDRA 1255
KPDRVVFNALI+ACGQSGAVDRAFDVLAEM+AE P+DPDH+++GAL+K C AGQ +RA
Sbjct: 569 KPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERA 628
Query: 1256 REVYKMIHQYKIIGTPEVYTIAVGCSSQMGDLEFALSVYRDMTRNGV 1396
+EVY+MIH+Y I GTPEVYTIAV S+ GD +FA S+Y+DM V
Sbjct: 629 KEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDV 675
Score = 72.0 bits (175), Expect = 3e-10
Identities = 53/247 (21%), Positives = 111/247 (44%), Gaps = 6/247 (2%)
Frame = +2
Query: 674 DKIYHVKFFNICKSQKAVKEAFH-FAKMIG-----NPTLSTFNMLLSVCASSQDSKGAFQ 835
D++ + C AV AF A+M +P + L+ C ++ + A +
Sbjct: 571 DRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKE 630
Query: 836 VLRLVKEAGLRADCKLYTTLISTCAKSGKVDTMFKVFHEMVNAGVEPNLHTYGALIDGCA 1015
V +++ + G+R ++YT +++C+KSG D ++ +M V P+ + ALID
Sbjct: 631 VYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAG 690
Query: 1016 RAGQVAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEPTPVDPD 1195
A + +AFG +S+ ++ + +++L+ AC + +A ++ ++++ + P
Sbjct: 691 HAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS--IKLRPT 748
Query: 1196 HVTVGALIKTCTQAGQFDRAREVYKMIHQYKIIGTPEVYTIAVGCSSQMGDLEFALSVYR 1375
T+ ALI + Q +A E I + Y++ + S + D E + +
Sbjct: 749 ISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLS 808
Query: 1376 DMTRNGV 1396
+GV
Sbjct: 809 QAKGDGV 815