BLASTX nr result
ID: Cimicifuga21_contig00022738
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00022738
(1394 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containi... 374 e-101
ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containi... 362 2e-97
ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group] g... 261 4e-67
gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indi... 259 2e-66
ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [S... 254 3e-65
>ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial [Vitis vinifera]
gi|297738261|emb|CBI27462.3| unnamed protein product
[Vitis vinifera]
Length = 386
Score = 374 bits (959), Expect = e-101
Identities = 195/382 (51%), Positives = 271/382 (70%), Gaps = 7/382 (1%)
Frame = +1
Query: 109 SLAEERT-SFPISSHRQSKSSIRTESDAEKIAETFL-KTTEHPRSYRDRSLFHIAVQKLA 282
SLA T S P ++ +KS++ +E D EK+A F +++ R R R L+ ++ ++L+
Sbjct: 13 SLARFSTLSDPFTTFLAAKSAVESEPDPEKLAHIFHHQSSNFARFRRHRPLYQLSCRRLS 72
Query: 283 KLQRFDLVERILEHQKETNFLKTEGFWIRIIMLYSNARMLDQAIRTF-----DNMELRSE 447
+ R DLVER+++HQK +TEGFWIR+IMLYS + M+D A+RTF D ++L +E
Sbjct: 73 RSGRLDLVERLIDHQKTLPHPRTEGFWIRLIMLYSTSGMVDHALRTFHQMVQDRVQL-TE 131
Query: 448 KSLCALLSACLQNRRFDLVHQYFESVPSKIGITPGVVEHNLVMRAFCGEKKLDSARSLLG 627
KSLCA+L+ L N D +H F ++PS+IG++PG ++LV++AFC +K ++SAR LL
Sbjct: 132 KSLCAILTVYLDNDLIDQLHTVFNTMPSEIGVSPGTKSYSLVLKAFCQQKDMESARKLLH 191
Query: 628 KMESEKGLKPDVASYNVLLTAYLKNGEGSKFDELFKEFTKKGLEPNLVTYNLRLTRLCGN 807
KME+ PD+ SYNVLL AY +NG+G +FDE+ KE KGLE + TYN R+ R C N
Sbjct: 192 KMEN-----PDIGSYNVLLEAYSENGDGVEFDEILKEIKNKGLEHDCTTYNHRILRFCKN 246
Query: 808 KECVRAKKMLDEMISKGVKPNVNSFNIIIDGFCKVADFESAKQIFEKMRSDDDESVPPNS 987
KE VRAKK+LDEM++KGVKPN S+N+II GFCKV DFESA+++ +M +D V P S
Sbjct: 247 KESVRAKKLLDEMVAKGVKPNSASYNMIIHGFCKVGDFESAQKVLGRMLADG--YVAPCS 304
Query: 988 DTYITLIRHLVQEGEFEFALEMCKESLQRKWVPPFNSMEGLVNGLVKLSKVNEAKEIVED 1167
+YITL +H+V+EGEF+ AL MCKE ++RKWVPPF +M+GLV GLV++SKV AKE+VE
Sbjct: 305 ISYITLFQHMVKEGEFDSALNMCKEIIRRKWVPPFEAMDGLVKGLVEISKVEAAKEVVEK 364
Query: 1168 MKKRLRGTAPEAWTKVEGLLPL 1233
MKKRL+G A ++W E LPL
Sbjct: 365 MKKRLKGNAADSWKTHEAALPL 386
>ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449494815|ref|XP_004159654.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 362 bits (928), Expect = 2e-97
Identities = 192/407 (47%), Positives = 273/407 (67%), Gaps = 9/407 (2%)
Frame = +1
Query: 40 MAAIVLRNPKSHVSRILLRMFSSSLA---EERTSFPISSHRQSKSSIRTESDAEKIAETF 210
MAA + R P+ L FS S + + P S R +KS+I ++SD +K+A++F
Sbjct: 1 MAAALPRTPRRLFLISRLHSFSYSTTPPLQPTSDSPFPSLRAAKSAILSQSDPDKLAQSF 60
Query: 211 LKTTEHPRSYRDRSLFHIAVQKLAKLQRFDLVERILEHQKETNFLKTEGFWIRIIMLYSN 390
++ + P R R ++H +++KLA+ QRFDL++ I++ ++ +EGFWIR+IMLYS+
Sbjct: 61 IQASTLPSFCRYRPIYHQSIRKLARAQRFDLIDVIIQSHHKSPSATSEGFWIRLIMLYSS 120
Query: 391 ARMLDQAIRTFDNMELR-----SEKSLCALLSACLQNRRFDLVHQYFESVPSKIGITPGV 555
M++QA+ D L SEKSLCA+LS L N + VH+ F S+P KIG+TP
Sbjct: 121 VGMVNQALYILDQAILHKSCNLSEKSLCAILSVFLDNSMPEKVHEMFRSIPEKIGVTPTA 180
Query: 556 VEHNLVMRAFCGEKKLDSARSLLGKM-ESEKGLKPDVASYNVLLTAYLKNGEGSKFDELF 732
V HNLV++AF + L SAR+ + ++ + + + P++ S+ +LL AY NG+ FDE+
Sbjct: 181 VSHNLVLKAFVRQNDLPSARNWIDELCKDDAKVIPNIDSFTILLGAYWSNGDMIGFDEIE 240
Query: 733 KEFTKKGLEPNLVTYNLRLTRLCGNKECVRAKKMLDEMISKGVKPNVNSFNIIIDGFCKV 912
KE +K+GLE NL TYN R++RLC NKEC RAKK+LDEMISKGVKPN +S++ II G+C V
Sbjct: 241 KEISKRGLEFNLATYNYRISRLCKNKECARAKKILDEMISKGVKPNSSSYDSIIHGYCDV 300
Query: 913 ADFESAKQIFEKMRSDDDESVPPNSDTYITLIRHLVQEGEFEFALEMCKESLQRKWVPPF 1092
D ESA +I + + +D V P S Y LIR +V+EGEFE ALE C+E+++R+WVPPF
Sbjct: 301 GDIESAMKILKGIL--EDGHVSPTSRIYYRLIRSMVKEGEFEMALETCRETIKRRWVPPF 358
Query: 1093 NSMEGLVNGLVKLSKVNEAKEIVEDMKKRLRGTAPEAWTKVEGLLPL 1233
+ME LV GLV +SKV EAKE+VE MKKRL+G A ++W K+E LPL
Sbjct: 359 EAMEALVRGLVAMSKVEEAKEVVEKMKKRLKGPAVDSWRKIEAALPL 405
>ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group]
gi|48716331|dbj|BAD22943.1| membrane-associated
salt-inducible protein-like [Oryza sativa Japonica Group]
gi|113538140|dbj|BAF10523.1| Os02g0829800 [Oryza sativa
Japonica Group] gi|125584252|gb|EAZ25183.1| hypothetical
protein OsJ_08983 [Oryza sativa Japonica Group]
gi|215769058|dbj|BAH01287.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 423
Score = 261 bits (666), Expect = 4e-67
Identities = 155/396 (39%), Positives = 228/396 (57%), Gaps = 11/396 (2%)
Frame = +1
Query: 64 PKSHVSRILLRMFSSSLAEERTSFPISSHRQSKSSIRTESDA-EKIAETFLKTTEHPRSY 240
P + R LL F S+ + +T P + K+SIR+ + E +A+ F+ HP
Sbjct: 17 PALLLRRQLLMRFLSTQTQSQTQTP-ADLATLKNSIRSAAHTPEALADLFISGLSHPAFL 75
Query: 241 RDRSLFHIAVQKLAKLQRFDLVERILEHQKETNFLK--TEGFWIRIIMLYSNARMLDQAI 414
DR +F ++V +LA R DLV IL + +EGF IR+I LYS A M D ++
Sbjct: 76 ADRPIFTLSVHRLASAGRRDLVASILSSSLTSLPAPHPSEGFLIRLISLYSAAGMPDHSL 135
Query: 415 RTFDNMELRSEKSLCALLSACLQNRRFDLVHQYFESVPSKIGITPGVVEHNLVMRAFCGE 594
TF + S+++L ALLSA NR +D Q F ++P+++GI P VV HN+++++F
Sbjct: 136 STFRIVTPPSDRALSALLSAYHDNRLYDRAIQAFRTLPAELGIKPSVVSHNVLLKSFVAS 195
Query: 595 KKLDSARSLLGKMESEKGLKPDVASYNVLLTAYLKNGEGSKFDELFKEFT-----KKGLE 759
L SAR+L +M S+ ++PD+ S N +L YL + + FD+ K+ T K+ L+
Sbjct: 196 GDLASARALFDEMPSKADVEPDIVSCNEILKGYLNAADYAAFDQFLKDNTTAAGGKRRLK 255
Query: 760 PNLVTYNLRLTRLCGNKECVRAKKMLDEMISKGVKPNVNSFNIIIDGFCKVADFESAKQI 939
PN+ TYNLR+ LC A ++LD M +KGV PN SFN +I G CK + +A I
Sbjct: 256 PNVSTYNLRMASLCSKGRSFEAAELLDAMEAKGVPPNRGSFNTVIQGLCKEGEVGAAVAI 315
Query: 940 FEKMRS---DDDESVPPNSDTYITLIRHLVQEGEFEFALEMCKESLQRKWVPPFNSMEGL 1110
F++M + + V PNS+TYI L+ LV +G F ALE+ KE LQ KW PPF +++GL
Sbjct: 316 FKRMPEVPRPNGKGVLPNSETYIMLLEGLVNKGVFAPALEVFKECLQNKWAPPFQAVQGL 375
Query: 1111 VNGLVKLSKVNEAKEIVEDMKKRLRGTAPEAWTKVE 1218
+ GL+K K AKE+ M+K ++G A E W KVE
Sbjct: 376 IKGLLKSRKAKHAKEVAMAMRKVVKGDAKEEWKKVE 411
>gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indica Group]
Length = 423
Score = 259 bits (661), Expect = 2e-66
Identities = 154/396 (38%), Positives = 227/396 (57%), Gaps = 11/396 (2%)
Frame = +1
Query: 64 PKSHVSRILLRMFSSSLAEERTSFPISSHRQSKSSIRTESDA-EKIAETFLKTTEHPRSY 240
P + R LL F S+ + +T P + K+SIR+ + E +A+ F+ HP
Sbjct: 17 PALLLRRQLLMRFLSTQTQSQTQTP-ADLATLKNSIRSAAHTPEALADLFISGLSHPAFL 75
Query: 241 RDRSLFHIAVQKLAKLQRFDLVERILEHQKETNFLK--TEGFWIRIIMLYSNARMLDQAI 414
DR +F ++V +LA R DLV IL + +EGF IR+I LYS A M D ++
Sbjct: 76 ADRPIFTLSVHRLASAGRRDLVASILSSSLTSLPAPHPSEGFLIRLISLYSAAGMPDHSL 135
Query: 415 RTFDNMELRSEKSLCALLSACLQNRRFDLVHQYFESVPSKIGITPGVVEHNLVMRAFCGE 594
TF + S+++L ALLSA NR +D Q F ++P+++GI P VV HN+++++F
Sbjct: 136 STFRIVTPPSDRALSALLSAYHDNRLYDRAIQAFRTLPAELGIKPSVVSHNVLLKSFVAS 195
Query: 595 KKLDSARSLLGKMESEKGLKPDVASYNVLLTAYLKNGEGSKFDELFKEFT-----KKGLE 759
L SAR+L +M S+ ++PD+ S N +L YL + + FD+ K+ T K+ L+
Sbjct: 196 GDLASARALFDEMPSKADVEPDIVSCNEILKGYLNAADYAAFDQFLKDNTTAAGGKRRLK 255
Query: 760 PNLVTYNLRLTRLCGNKECVRAKKMLDEMISKGVKPNVNSFNIIIDGFCKVADFESAKQI 939
PN+ TYNLR+ LC A ++LD M +KGV PN SFN +I G CK + +A I
Sbjct: 256 PNVSTYNLRMASLCSKGRSFEAAELLDAMEAKGVPPNRGSFNTVIQGLCKEGEVGAAVAI 315
Query: 940 FEKMRS---DDDESVPPNSDTYITLIRHLVQEGEFEFALEMCKESLQRKWVPPFNSMEGL 1110
F++M + + V PNS+TYI L+ LV +G F ALE+ KE LQ KW PPF +++GL
Sbjct: 316 FKRMPEVPRPNGKGVLPNSETYIMLLEGLVNKGVFAPALEVFKECLQNKWAPPFQAVQGL 375
Query: 1111 VNGLVKLSKVNEAKEIVEDMKKRLRGTAPEAWTKVE 1218
+ GL+K K AKE+ M+K ++G A E W K E
Sbjct: 376 IKGLLKSRKAKHAKEVAMAMRKVVKGDAKEEWKKFE 411
>ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
gi|241934669|gb|EES07814.1| hypothetical protein
SORBIDRAFT_04g038280 [Sorghum bicolor]
Length = 419
Score = 254 bits (650), Expect = 3e-65
Identities = 152/409 (37%), Positives = 233/409 (56%), Gaps = 12/409 (2%)
Frame = +1
Query: 43 AAIVLRNPKSHVSR--ILLRMFSSS--LAEERTSFPISSHRQSKSSIRTESDA-EKIAET 207
AA + R+P S +SR +L+R+ S+ LA T + + KSSIR + + + +A
Sbjct: 5 AAALCRSP-SLLSRRHLLVRLLSTQTQLATPPTPTTPADLSRLKSSIRDAATSPDALATL 63
Query: 208 FLKTTEHPRSYRDRSLFHIAVQKLAKLQRFDLVERILEHQKET--NFLKTEGFWIRIIML 381
FL HP DR LF ++V +LA R DLV +L + +EGF +R+I L
Sbjct: 64 FLSGLPHPAFLADRPLFALSVHRLASAGRRDLVASVLSSSLTALPSPHPSEGFLLRLISL 123
Query: 382 YSNARMLDQAIRTFDNMELRSEKSLCALLSACLQNRRFDLVHQYFESVPSKIGITPGVVE 561
YS A M D ++ F + S+++L ALLS NR +D + F ++P+++GI PG+V
Sbjct: 124 YSAAGMPDHSLTVFRLVNPPSDRALSALLSTYHDNRLYDRAVRAFNTLPAELGIKPGLVS 183
Query: 562 HNLVMRAFCGEKKLDSARSLLGKMESEKGLKPDVASYNVLLTAYLKNGEGSKFDELFKEF 741
HN++++A + +ARS KM G++PD+ S N +L YL G+ + FD+L KE
Sbjct: 184 HNVLLKALVASGDIAAARSAFDKMPDTAGVQPDIVSCNEILKGYLSTGDDAAFDQLVKEI 243
Query: 742 T--KKGLEPNLVTYNLRLTRLCGNKECVRAKKMLDEMISKGVKPNVNSFNIIIDGFCKVA 915
+ L+PN+ TYNLR+ LC + A+++LD M + GV PN SFN +I G C
Sbjct: 244 AGPNRRLKPNVGTYNLRMAMLCSKERSFEAEELLDAMGANGVPPNRASFNTVIKGLCNEG 303
Query: 916 DFESAKQIFEKMRS---DDDESVPPNSDTYITLIRHLVQEGEFEFALEMCKESLQRKWVP 1086
+ +A +F++M + V PN +TYI L+ LV + F+ ALE+CKE L KW P
Sbjct: 304 EVGAAMALFKRMPEVPRQKGKGVSPNFETYIMLLEALVNKNLFDPALEVCKECLHNKWAP 363
Query: 1087 PFNSMEGLVNGLVKLSKVNEAKEIVEDMKKRLRGTAPEAWTKVEGLLPL 1233
PF +++GLV L+K K A+E++ M+K ++G A + WTKVE P+
Sbjct: 364 PFQAVKGLVESLLKSRKAKHAREVLMAMRKAVKGDAKQEWTKVEAQFPM 412