BLASTX nr result

ID: Cimicifuga21_contig00022724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022724
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527842.1| PREDICTED: uncharacterized protein LOC100775...   104   9e-21
ref|XP_002308599.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002281202.1| PREDICTED: uncharacterized protein LOC100266...   102   4e-20
ref|XP_002516508.1| conserved hypothetical protein [Ricinus comm...    97   1e-18
gb|AFW86943.1| putative SWIM zinc finger family protein [Zea mays]     92   4e-17

>ref|XP_003527842.1| PREDICTED: uncharacterized protein LOC100775505 [Glycine max]
          Length = 230

 Score =  104 bits (259), Expect = 9e-21
 Identities = 47/64 (73%), Positives = 54/64 (84%)
 Frame = -3

Query: 227 SCPDRTIPCKHILFVFIRVLGITLDDPCLRRRTLRPCQLMRLLGTPTSSETLAGTRVRER 48
           +CPDRT PCKHILFVFIRVLG++LDD CLRRRTLRPCQL RLLG PT  E +AG  +R+R
Sbjct: 70  TCPDRTTPCKHILFVFIRVLGVSLDDVCLRRRTLRPCQLQRLLGAPTLPEVVAGGTLRQR 129

Query: 47  FQQV 36
           F Q+
Sbjct: 130 FHQL 133


>ref|XP_002308599.1| predicted protein [Populus trichocarpa] gi|222854575|gb|EEE92122.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/71 (70%), Positives = 53/71 (74%)
 Frame = -3

Query: 227 SCPDRTIPCKHILFVFIRVLGITLDDPCLRRRTLRPCQLMRLLGTPTSSETLAGTRVRER 48
           SCPDRT PCKHILFV IRVLG++LDD CLRRR LR CQL  LLGTPT  E LAG  VRER
Sbjct: 77  SCPDRTTPCKHILFVLIRVLGVSLDDACLRRRNLRTCQLNHLLGTPTLPEALAGFSVRER 136

Query: 47  FQQVLPQLLMG 15
           F Q+  Q   G
Sbjct: 137 FHQLFFQTRHG 147


>ref|XP_002281202.1| PREDICTED: uncharacterized protein LOC100266212 [Vitis vinifera]
          Length = 233

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/71 (67%), Positives = 54/71 (76%)
 Frame = -3

Query: 227 SCPDRTIPCKHILFVFIRVLGITLDDPCLRRRTLRPCQLMRLLGTPTSSETLAGTRVRER 48
           +CPDRT PCKHILFVFI+VLG++LDD CLRRRTLRPC L  LL  PTS E +AG  VRER
Sbjct: 68  TCPDRTTPCKHILFVFIKVLGVSLDDSCLRRRTLRPCLLSHLLSKPTSPEAVAGAGVRER 127

Query: 47  FQQVLPQLLMG 15
           F Q+  Q   G
Sbjct: 128 FHQLFLQAREG 138


>ref|XP_002516508.1| conserved hypothetical protein [Ricinus communis]
           gi|223544328|gb|EEF45849.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = -3

Query: 227 SCPDRTIPCKHILFVFIRVLGITLDDPCLRRRTLRPCQLMRLLGTPTSSETLAGTRVRER 48
           +CPDRT PCKHILFV IRVLG++L+D CLRRRTLRPC++  LL TPTS E LA   VR+R
Sbjct: 66  TCPDRTTPCKHILFVLIRVLGVSLNDTCLRRRTLRPCRVSHLLSTPTSGEALASEGVRQR 125

Query: 47  FQQVLPQL 24
           F ++  Q+
Sbjct: 126 FHELFFQV 133


>gb|AFW86943.1| putative SWIM zinc finger family protein [Zea mays]
          Length = 252

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 39/64 (60%), Positives = 51/64 (79%)
 Frame = -3

Query: 227 SCPDRTIPCKHILFVFIRVLGITLDDPCLRRRTLRPCQLMRLLGTPTSSETLAGTRVRER 48
           +CPD  +PCKHILFV +RVLG++LD+ C+ R+TL PCQ+ RL+GTPT  + LAG R RER
Sbjct: 66  TCPDPAVPCKHILFVLLRVLGLSLDEACVWRQTLHPCQVARLVGTPTYPDVLAGARARER 125

Query: 47  FQQV 36
           F Q+
Sbjct: 126 FHQL 129


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