BLASTX nr result

ID: Cimicifuga21_contig00022710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022710
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241...   151   6e-35
emb|CBI16215.3| unnamed protein product [Vitis vinifera]              151   6e-35
ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thali...   144   6e-33
dbj|BAB08366.1| unnamed protein product [Arabidopsis thaliana]        144   6e-33
ref|NP_001154789.1| ribonuclease P subunit Rpp30 [Arabidopsis th...   144   6e-33

>ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241609 [Vitis vinifera]
          Length = 694

 Score =  151 bits (381), Expect = 6e-35
 Identities = 82/130 (63%), Positives = 98/130 (75%)
 Frame = +2

Query: 95  MGYFDLSIPCFEGEPANPSSSSPDNTTRNTTRLKTVVQTMELGYTGVAYNRSIKGVMSDK 274
           MG+FDL+IP ++G  A    SS         R+K VV+ MELGY+GVAYNR IKGVMSD 
Sbjct: 1   MGFFDLNIP-YDGTTAAGDKSS---------RIKVVVKAMELGYSGVAYNRKIKGVMSDS 50

Query: 275 DICSISQFPLSSLLKASPNLSTSVKFHRELLGVPVNTLFRQYTRLTVSVDSLIQCSALNS 454
           D CSI    LSSLLK +P+LS+SV+FHR LLGVP+++ FRQYTRLTV+VDS  Q SALNS
Sbjct: 51  DSCSIPPLSLSSLLKLAPSLSSSVRFHRSLLGVPLSSPFRQYTRLTVAVDSSPQASALNS 110

Query: 455 GNSVLKTYDL 484
           GN VLK+YDL
Sbjct: 111 GNPVLKSYDL 120


>emb|CBI16215.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  151 bits (381), Expect = 6e-35
 Identities = 82/130 (63%), Positives = 98/130 (75%)
 Frame = +2

Query: 95  MGYFDLSIPCFEGEPANPSSSSPDNTTRNTTRLKTVVQTMELGYTGVAYNRSIKGVMSDK 274
           MG+FDL+IP ++G  A    SS         R+K VV+ MELGY+GVAYNR IKGVMSD 
Sbjct: 1   MGFFDLNIP-YDGTTAAGDKSS---------RIKVVVKAMELGYSGVAYNRKIKGVMSDS 50

Query: 275 DICSISQFPLSSLLKASPNLSTSVKFHRELLGVPVNTLFRQYTRLTVSVDSLIQCSALNS 454
           D CSI    LSSLLK +P+LS+SV+FHR LLGVP+++ FRQYTRLTV+VDS  Q SALNS
Sbjct: 51  DSCSIPPLSLSSLLKLAPSLSSSVRFHRSLLGVPLSSPFRQYTRLTVAVDSSPQASALNS 110

Query: 455 GNSVLKTYDL 484
           GN VLK+YDL
Sbjct: 111 GNPVLKSYDL 120


>ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thaliana]
           gi|332009878|gb|AED97261.1| ribonuclease P subunit Rpp30
           [Arabidopsis thaliana]
          Length = 581

 Score =  144 bits (364), Expect = 6e-33
 Identities = 76/130 (58%), Positives = 92/130 (70%)
 Frame = +2

Query: 95  MGYFDLSIPCFEGEPANPSSSSPDNTTRNTTRLKTVVQTMELGYTGVAYNRSIKGVMSDK 274
           MG+FDLSIP    EP  P S   +     T RLK   + MELGY G+A+NRSIKGVMSDK
Sbjct: 1   MGFFDLSIPY--NEP--PRSGGKEIAGGKTLRLKLATKAMELGYVGIAHNRSIKGVMSDK 56

Query: 275 DICSISQFPLSSLLKASPNLSTSVKFHRELLGVPVNTLFRQYTRLTVSVDSLIQCSALNS 454
           D C+I    L SL+K +P L++SV FHR+LLGVP  T FRQYTRLTV V+S  QC +LNS
Sbjct: 57  DSCTIPLLTLGSLIKVAPRLASSVGFHRDLLGVPRTTPFRQYTRLTVHVESNAQCQSLNS 116

Query: 455 GNSVLKTYDL 484
           GN +LK+YD+
Sbjct: 117 GNPILKSYDI 126


>dbj|BAB08366.1| unnamed protein product [Arabidopsis thaliana]
          Length = 680

 Score =  144 bits (364), Expect = 6e-33
 Identities = 76/130 (58%), Positives = 92/130 (70%)
 Frame = +2

Query: 95  MGYFDLSIPCFEGEPANPSSSSPDNTTRNTTRLKTVVQTMELGYTGVAYNRSIKGVMSDK 274
           MG+FDLSIP    EP  P S   +     T RLK   + MELGY G+A+NRSIKGVMSDK
Sbjct: 1   MGFFDLSIPY--NEP--PRSGGKEIAGGKTLRLKLATKAMELGYVGIAHNRSIKGVMSDK 56

Query: 275 DICSISQFPLSSLLKASPNLSTSVKFHRELLGVPVNTLFRQYTRLTVSVDSLIQCSALNS 454
           D C+I    L SL+K +P L++SV FHR+LLGVP  T FRQYTRLTV V+S  QC +LNS
Sbjct: 57  DSCTIPLLTLGSLIKVAPRLASSVGFHRDLLGVPRTTPFRQYTRLTVHVESNAQCQSLNS 116

Query: 455 GNSVLKTYDL 484
           GN +LK+YD+
Sbjct: 117 GNPILKSYDI 126


>ref|NP_001154789.1| ribonuclease P subunit Rpp30 [Arabidopsis thaliana]
           gi|332009879|gb|AED97262.1| ribonuclease P subunit Rpp30
           [Arabidopsis thaliana]
          Length = 705

 Score =  144 bits (364), Expect = 6e-33
 Identities = 76/130 (58%), Positives = 92/130 (70%)
 Frame = +2

Query: 95  MGYFDLSIPCFEGEPANPSSSSPDNTTRNTTRLKTVVQTMELGYTGVAYNRSIKGVMSDK 274
           MG+FDLSIP    EP  P S   +     T RLK   + MELGY G+A+NRSIKGVMSDK
Sbjct: 1   MGFFDLSIPY--NEP--PRSGGKEIAGGKTLRLKLATKAMELGYVGIAHNRSIKGVMSDK 56

Query: 275 DICSISQFPLSSLLKASPNLSTSVKFHRELLGVPVNTLFRQYTRLTVSVDSLIQCSALNS 454
           D C+I    L SL+K +P L++SV FHR+LLGVP  T FRQYTRLTV V+S  QC +LNS
Sbjct: 57  DSCTIPLLTLGSLIKVAPRLASSVGFHRDLLGVPRTTPFRQYTRLTVHVESNAQCQSLNS 116

Query: 455 GNSVLKTYDL 484
           GN +LK+YD+
Sbjct: 117 GNPILKSYDI 126


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