BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022704
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g...    99   7e-19
ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g...    98   1e-18
ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g...    95   1e-17
emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]    95   1e-17
ref|XP_002323932.1| predicted protein [Populus trichocarpa] gi|2...    90   3e-16

>ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 643

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 63/182 (34%), Positives = 92/182 (50%)
 Frame = +3

Query: 54  DGNDHTNAATRNGASMHIFKPSRLPPLTDVISTGQVTFRLLCHLSKSGAVIGKSGSIVKL 233
           +G D T+    NG+S    K S+ PP   +I  G V FR+LCH S+ G VIGKSG ++K 
Sbjct: 27  NGGD-THVGVSNGSSKS--KRSKQPPPL-IIPPGHVAFRMLCHASRIGGVIGKSGFVIKQ 82

Query: 234 MEQETGTKIRIENIVPFCQERVITILAPESPKKTIVLRSSNAKTXXXXXXXXXXXXXSPA 413
           ++Q TG KIR+E       +RV+T++   +    + L  ++  +             S A
Sbjct: 83  LQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRVFLEQNSGAS-------GEEVEASKA 135

Query: 414 QHGLIRALERVLEAETEIEENFSSTGVEKGVVTCRLLTDSSHIGYMMXXXXXXXXXXEDD 593
           Q GL++  ER+LE   EIE      G E GVV CRLL D + +G ++            +
Sbjct: 136 QEGLLKVFERILEVAAEIEG--VEVGAEVGVVYCRLLADVAQVGSVIGKGGKVVEKIRKE 193

Query: 594 SG 599
           SG
Sbjct: 194 SG 195



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 39/144 (27%), Positives = 66/144 (45%)
 Frame = +3

Query: 123 LPPLTDVISTGQVTFRLLCHLSKSGAVIGKSGSIVKLMEQETGTKIRIENIVPFCQERVI 302
           LPP+   ++   V F++LC   + G VIGK G+IV+ ++ E+G  + +   V  C ER+I
Sbjct: 297 LPPVDTNVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLI 356

Query: 303 TILAPESPKKTIVLRSSNAKTXXXXXXXXXXXXXSPAQHGLIRALERVLEAETEIEENFS 482
           +I A E+ +                         SPAQ  ++    R ++   E  +  S
Sbjct: 357 SITASENIES----------------------RYSPAQKAVVLVFSRSVDVAIEKWQESS 394

Query: 483 STGVEKGVVTCRLLTDSSHIGYMM 554
           S G     V  RL+  S+ +G ++
Sbjct: 395 SKG---SPVVARLVVPSNQVGCVL 415


>ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 658

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 61/177 (34%), Positives = 89/177 (50%)
 Frame = +3

Query: 69  TNAATRNGASMHIFKPSRLPPLTDVISTGQVTFRLLCHLSKSGAVIGKSGSIVKLMEQET 248
           T+    NG+S    K S+ PP   +I  G V FR+LCH S+ G VIGKSG ++K ++Q T
Sbjct: 26  THVGVSNGSSKS--KRSKQPPPL-IIPPGHVAFRMLCHASRIGGVIGKSGFVIKQLQQST 82

Query: 249 GTKIRIENIVPFCQERVITILAPESPKKTIVLRSSNAKTXXXXXXXXXXXXXSPAQHGLI 428
           G KIR+E       +RV+T++   +    + L  ++  +             S AQ GL+
Sbjct: 83  GVKIRVEEAPSESPDRVVTVIGSPALTSRVFLEQNSGAS-------GEEVEASKAQEGLL 135

Query: 429 RALERVLEAETEIEENFSSTGVEKGVVTCRLLTDSSHIGYMMXXXXXXXXXXEDDSG 599
           +  ER+LE   EIE      G E GVV CRLL D + +G ++            +SG
Sbjct: 136 KVFERILEVAAEIEG--VEVGAEVGVVYCRLLADVAQVGSVIGKGGKVVEKIRKESG 190



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 39/144 (27%), Positives = 66/144 (45%)
 Frame = +3

Query: 123 LPPLTDVISTGQVTFRLLCHLSKSGAVIGKSGSIVKLMEQETGTKIRIENIVPFCQERVI 302
           LPP+   ++   V F++LC   + G VIGK G+IV+ ++ E+G  + +   V  C ER+I
Sbjct: 292 LPPVDTNVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLI 351

Query: 303 TILAPESPKKTIVLRSSNAKTXXXXXXXXXXXXXSPAQHGLIRALERVLEAETEIEENFS 482
           +I A E+ +                         SPAQ  ++    R ++   E  +  S
Sbjct: 352 SITASENIES----------------------RYSPAQKAVVLVFSRSVDVAIEKWQESS 389

Query: 483 STGVEKGVVTCRLLTDSSHIGYMM 554
           S G     V  RL+  S+ +G ++
Sbjct: 390 SKG---SPVVARLVVPSNQVGCVL 410


>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 648

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 61/173 (35%), Positives = 90/173 (52%), Gaps = 1/173 (0%)
 Frame = +3

Query: 87  NGASMHIFKPSRLPPLTDVISTGQVTFRLLCHLSKSGAVIGKSGSIVKLMEQETGTKIRI 266
           NG+S    K S+ PP    +  G V FRLLCH S+ G VIGKSG IVK ++ +TG +IR+
Sbjct: 31  NGSS----KRSKPPPPPIPVPAGHVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRV 86

Query: 267 ENIVPFCQERVITILAPESPKKTIVLRSSNAKTXXXXXXXXXXXXXSPAQHGLIRALERV 446
           E+       RVI ++AP S  + I L+ S+ +              S AQ  ++R  ER+
Sbjct: 87  EDSPSTSDHRVILVIAPASVNRRIALQGSSEEV-----------EASAAQEAVLRVFERI 135

Query: 447 LEAETEIEENFSSTGVEK-GVVTCRLLTDSSHIGYMMXXXXXXXXXXEDDSGA 602
           LE    ++      GV   GVV+CRLL ++S +G ++            +SG+
Sbjct: 136 LEVAAVVD------GVPPGGVVSCRLLAETSQVGSVIGKGGKVVEKIRRESGS 182



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 51/161 (31%), Positives = 73/161 (45%)
 Frame = +3

Query: 120 RLPPLTDVISTGQVTFRLLCHLSKSGAVIGKSGSIVKLMEQETGTKIRIENIVPFCQERV 299
           R+  L    S  +V F++LC   + G VIGK G+IVK ++ E G  I +   V  C ER+
Sbjct: 286 RISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERL 345

Query: 300 ITILAPESPKKTIVLRSSNAKTXXXXXXXXXXXXXSPAQHGLIRALERVLEAETEIEENF 479
           ITI A E+P+                         SPAQ+G+I    R +EA   IE+  
Sbjct: 346 ITITASENPES----------------------RYSPAQNGVILVFNRSIEA--GIEKGL 381

Query: 480 SSTGVEKGVVTCRLLTDSSHIGYMMXXXXXXXXXXEDDSGA 602
            S G +   V+ RL+  S+ +G +M             SGA
Sbjct: 382 DS-GSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGA 421


>emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
          Length = 587

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 61/173 (35%), Positives = 90/173 (52%), Gaps = 1/173 (0%)
 Frame = +3

Query: 87  NGASMHIFKPSRLPPLTDVISTGQVTFRLLCHLSKSGAVIGKSGSIVKLMEQETGTKIRI 266
           NG+S    K S+ PP    +  G V FRLLCH S+ G VIGKSG IVK ++ +TG +IR+
Sbjct: 31  NGSS----KRSKPPPPPIPVPAGHVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRV 86

Query: 267 ENIVPFCQERVITILAPESPKKTIVLRSSNAKTXXXXXXXXXXXXXSPAQHGLIRALERV 446
           E+       RVI ++AP S  + I L+ S+ +              S AQ  ++R  ER+
Sbjct: 87  EDSPSTSDHRVILVIAPASVNRRIALQGSSEEV-----------EASAAQEAVLRVFERI 135

Query: 447 LEAETEIEENFSSTGVEK-GVVTCRLLTDSSHIGYMMXXXXXXXXXXEDDSGA 602
           LE    ++      GV   GVV+CRLL ++S +G ++            +SG+
Sbjct: 136 LEVAAVVD------GVPPGGVVSCRLLAETSQVGSVIGKGGKVVEKIRRESGS 182


>ref|XP_002323932.1| predicted protein [Populus trichocarpa] gi|222866934|gb|EEF04065.1|
           predicted protein [Populus trichocarpa]
          Length = 722

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 50/134 (37%), Positives = 74/134 (55%)
 Frame = +3

Query: 144 ISTGQVTFRLLCHLSKSGAVIGKSGSIVKLMEQETGTKIRIENIVPFCQERVITILAPES 323
           + +G V+FRLLCH S+ G VIGK+G+I+K ++Q+TG K+RIE+      +RVIT++ P +
Sbjct: 31  VPSGHVSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPIT 90

Query: 324 PKKTIVLRSSNAKTXXXXXXXXXXXXXSPAQHGLIRALERVLEAETEIEENFSSTGVEKG 503
               +  R  +A               S  Q  L+R  ER+LE   E      S  V  G
Sbjct: 91  QSAVVFSRIESA------------VEVSKGQEALVRVFERILEVAAE------SDSVADG 132

Query: 504 VVTCRLLTDSSHIG 545
           VV+CR+L + S +G
Sbjct: 133 VVSCRMLAEVSSVG 146



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/133 (29%), Positives = 60/133 (45%)
 Frame = +3

Query: 156 QVTFRLLCHLSKSGAVIGKSGSIVKLMEQETGTKIRIENIVPFCQERVITILAPESPKKT 335
           Q+ FR+LC   + G VIGK G+IV+ ++ ETG  I +   V  C ER+IT+ A E+P+  
Sbjct: 299 QLVFRILCTTDRIGGVIGKGGNIVRALQNETGAAISVGPTVSECDERLITVTASENPES- 357

Query: 336 IVLRSSNAKTXXXXXXXXXXXXXSPAQHGLIRALERVLEAETEIEENFSSTGVEKGVVTC 515
                                  S AQ  ++    R +  E+ IE+           VT 
Sbjct: 358 ---------------------RYSAAQKTIVLVFSRAV--ESGIEKGLDPGSSRGSPVTA 394

Query: 516 RLLTDSSHIGYMM 554
           RL+   S +G ++
Sbjct: 395 RLVVSPSQVGCLL 407